# Assembly name:  rCycPin1.hap1
# Organism name:  Cyclura pinguis (lizards & snakes)
# Isolate:  rCycPin1
# Sex:  male
# Taxid:          118683
# BioSample:      SAMN35151422
# BioProject:     PRJNA973807
# Submitter:      Vertebrate Genomes Project
# Date:           2023-07-05
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JASZZK01
# Assembly method: Hifiasm + Hi-C phasing v. 0.16.1 + galaxy4; Bionano Solve v. 3.7; yahs v. 1.2.3; gEVAL manual curtion v. 2023-03-02
# Expected final version: no
# Genome coverage: 30.0x
# Sequencing technology: PacBio Sequel II HiFi; Bionano Genomics DLS; Dovetail OmniC
# RefSeq category: Representative Genome
# GenBank assembly accession: GCA_030412105.1
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_030412115.1		Primary Assembly
## GCA_030412125.1		non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
SUPER_1	assembled-molecule	1	Chromosome	CM059599.1	<>	na	Primary Assembly	392530567	na
SUPER_2	assembled-molecule	2	Chromosome	CM059600.1	<>	na	Primary Assembly	357518459	na
SUPER_3	assembled-molecule	3	Chromosome	CM059601.1	<>	na	Primary Assembly	291724653	na
SUPER_4	assembled-molecule	4	Chromosome	CM059602.1	<>	na	Primary Assembly	268097089	na
SUPER_5	assembled-molecule	5	Chromosome	CM059603.1	<>	na	Primary Assembly	218507537	na
SUPER_6	assembled-molecule	6	Chromosome	CM059604.1	<>	na	Primary Assembly	143874929	na
SUPER_7	assembled-molecule	7	Chromosome	CM059605.1	<>	na	Primary Assembly	36501243	na
SUPER_8	assembled-molecule	8	Chromosome	CM059606.1	<>	na	Primary Assembly	34283620	na
SUPER_9	assembled-molecule	9	Chromosome	CM059607.1	<>	na	Primary Assembly	34008078	na
SUPER_10	assembled-molecule	10	Chromosome	CM059608.1	<>	na	Primary Assembly	33437332	na
SUPER_12	assembled-molecule	12	Chromosome	CM059609.1	<>	na	Primary Assembly	28850466	na
SUPER_13	assembled-molecule	13	Chromosome	CM059610.1	<>	na	Primary Assembly	19452413	na
SUPER_14	assembled-molecule	14	Chromosome	CM059611.1	<>	na	Primary Assembly	19168256	na
SUPER_15	assembled-molecule	15	Chromosome	CM059612.1	<>	na	Primary Assembly	18565845	na
SUPER_16	assembled-molecule	16	Chromosome	CM059613.1	<>	na	Primary Assembly	18066735	na
SUPER_17	assembled-molecule	17	Chromosome	CM059614.1	<>	na	Primary Assembly	10364684	na
SUPER_X	assembled-molecule	X	Chromosome	CM059615.1	<>	na	Primary Assembly	20505789	na
SUPER_Y	assembled-molecule	Y	Chromosome	CM059616.1	<>	na	Primary Assembly	4956397	na
SUPER_11	unlocalized-scaffold	11	Chromosome	JASZZK010000011.1	<>	na	Primary Assembly	32669176	na
Scaffold_49	unplaced-scaffold	na	na	JASZZK010000020.1	<>	na	Primary Assembly	80065	na
Scaffold_48	unplaced-scaffold	na	na	JASZZK010000021.1	<>	na	Primary Assembly	70699	na
Scaffold_20	unplaced-scaffold	na	na	JASZZK010000022.1	<>	na	Primary Assembly	67000	na
Scaffold_62	unplaced-scaffold	na	na	JASZZK010000023.1	<>	na	Primary Assembly	59881	na
Scaffold_47	unplaced-scaffold	na	na	JASZZK010000024.1	<>	na	Primary Assembly	51160	na
Scaffold_50	unplaced-scaffold	na	na	JASZZK010000025.1	<>	na	Primary Assembly	48229	na
Scaffold_65	unplaced-scaffold	na	na	JASZZK010000026.1	<>	na	Primary Assembly	47501	na
Scaffold_61	unplaced-scaffold	na	na	JASZZK010000027.1	<>	na	Primary Assembly	38251	na
Scaffold_66	unplaced-scaffold	na	na	JASZZK010000028.1	<>	na	Primary Assembly	34980	na
Scaffold_63	unplaced-scaffold	na	na	JASZZK010000029.1	<>	na	Primary Assembly	33747	na
ptg000001l_rc_rotated	assembled-molecule	MT	Mitochondrion	CM059617.1	<>	na	non-nuclear	16631	na