# Assembly name: ASM3055561v1 # Organism name: Acomys cahirinus (Egyptian spiny mouse) # Isolate: DEM-2023a # Sex: male # Taxid: 10068 # BioSample: SAMN33863546 # BioProject: PRJNA935753 # Submitter: University of Washington # Date: 2023-07-31 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAULSH01 # Assembly method: flye v. 2.9 # Expected final version: yes # Genome coverage: 38.0x # Sequencing technology: Oxford Nanopore PromethION # GenBank assembly accession: GCA_030555615.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_030555695.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_1 unplaced-scaffold na na JAULSH010000001.1 <> na Primary Assembly 212232915 na scaffold_10 unplaced-scaffold na na JAULSH010000010.1 <> na Primary Assembly 124889101 na scaffold_100 unplaced-scaffold na na JAULSH010000100.1 <> na Primary Assembly 16172 na scaffold_101 unplaced-scaffold na na JAULSH010000101.1 <> na Primary Assembly 13826 na scaffold_102 unplaced-scaffold na na JAULSH010000102.1 <> na Primary Assembly 11472 na scaffold_103 unplaced-scaffold na na JAULSH010000103.1 <> na Primary Assembly 10411 na scaffold_104 unplaced-scaffold na na JAULSH010000104.1 <> na Primary Assembly 10297 na scaffold_105 unplaced-scaffold na na JAULSH010000105.1 <> na Primary Assembly 8248 na scaffold_106 unplaced-scaffold na na JAULSH010000106.1 <> na Primary Assembly 7557 na scaffold_107 unplaced-scaffold na na JAULSH010000107.1 <> na Primary Assembly 6959 na scaffold_108 unplaced-scaffold na na JAULSH010000108.1 <> na Primary Assembly 6548 na scaffold_109 unplaced-scaffold na na JAULSH010000109.1 <> na Primary Assembly 6090 na scaffold_11 unplaced-scaffold na na JAULSH010000011.1 <> na Primary Assembly 121490525 na scaffold_110 unplaced-scaffold na na JAULSH010000110.1 <> na Primary Assembly 5967 na scaffold_111 unplaced-scaffold na na JAULSH010000111.1 <> na Primary Assembly 4725 na scaffold_112 unplaced-scaffold na na JAULSH010000112.1 <> na Primary Assembly 4159 na scaffold_113 unplaced-scaffold na na JAULSH010000113.1 <> na Primary Assembly 3703 na scaffold_114 unplaced-scaffold na na JAULSH010000114.1 <> na Primary Assembly 3657 na scaffold_115 unplaced-scaffold na na JAULSH010000115.1 <> na Primary Assembly 3345 na scaffold_116 unplaced-scaffold na na JAULSH010000116.1 <> na Primary Assembly 2943 na scaffold_117 unplaced-scaffold na na JAULSH010000117.1 <> na Primary Assembly 2673 na scaffold_118 unplaced-scaffold na na JAULSH010000118.1 <> na Primary Assembly 2502 na scaffold_119 unplaced-scaffold na na JAULSH010000119.1 <> na Primary Assembly 1839 na scaffold_12 unplaced-scaffold na na JAULSH010000012.1 <> na Primary Assembly 120414391 na scaffold_120 unplaced-scaffold na na JAULSH010000120.1 <> na Primary Assembly 1755 na scaffold_121 unplaced-scaffold na na JAULSH010000121.1 <> na Primary Assembly 1727 na scaffold_122 unplaced-scaffold na na JAULSH010000122.1 <> na Primary Assembly 1654 na scaffold_123 unplaced-scaffold na na JAULSH010000123.1 <> na Primary Assembly 1627 na scaffold_124 unplaced-scaffold na na JAULSH010000124.1 <> na Primary Assembly 1316 na scaffold_125 unplaced-scaffold na na JAULSH010000125.1 <> na Primary Assembly 1239 na scaffold_126 unplaced-scaffold na na JAULSH010000126.1 <> na Primary Assembly 819 na scaffold_127 unplaced-scaffold na na JAULSH010000127.1 <> na Primary Assembly 766 na scaffold_128 unplaced-scaffold na na JAULSH010000128.1 <> na Primary Assembly 628 na scaffold_129 unplaced-scaffold na na JAULSH010000129.1 <> na Primary Assembly 610 na scaffold_13 unplaced-scaffold na na JAULSH010000013.1 <> na Primary Assembly 117233451 na scaffold_14 unplaced-scaffold na na JAULSH010000014.1 <> na Primary Assembly 101672556 na scaffold_15 unplaced-scaffold na na JAULSH010000015.1 <> na Primary Assembly 95416855 na scaffold_16 unplaced-scaffold na na JAULSH010000016.1 <> na Primary Assembly 89279559 na scaffold_17 unplaced-scaffold na na JAULSH010000017.1 <> na Primary Assembly 80108827 na scaffold_18 unplaced-scaffold na na JAULSH010000018.1 <> na Primary Assembly 40110011 na scaffold_19 unplaced-scaffold na na JAULSH010000019.1 <> na Primary Assembly 25092059 na scaffold_2 unplaced-scaffold na na JAULSH010000002.1 <> na Primary Assembly 161451390 na scaffold_20 unplaced-scaffold na na JAULSH010000020.1 <> na Primary Assembly 2493000 na scaffold_21 unplaced-scaffold na na JAULSH010000021.1 <> na Primary Assembly 2177801 na scaffold_22 unplaced-scaffold na na JAULSH010000022.1 <> na Primary Assembly 1412000 na scaffold_23 unplaced-scaffold na na JAULSH010000023.1 <> na Primary Assembly 1290049 na scaffold_24 unplaced-scaffold na na JAULSH010000024.1 <> na Primary Assembly 1231651 na scaffold_25 unplaced-scaffold na na JAULSH010000025.1 <> na Primary Assembly 1203284 na scaffold_26 unplaced-scaffold na na JAULSH010000026.1 <> na Primary Assembly 1102312 na scaffold_27 unplaced-scaffold na na JAULSH010000027.1 <> na Primary Assembly 1081186 na scaffold_28 unplaced-scaffold na na JAULSH010000028.1 <> na Primary Assembly 1031419 na scaffold_29 unplaced-scaffold na na JAULSH010000029.1 <> na Primary Assembly 995016 na scaffold_3 unplaced-scaffold na na JAULSH010000003.1 <> na Primary Assembly 151978760 na scaffold_30 unplaced-scaffold na na JAULSH010000030.1 <> na Primary Assembly 892821 na scaffold_31 unplaced-scaffold na na JAULSH010000031.1 <> na Primary Assembly 892000 na scaffold_32 unplaced-scaffold na na JAULSH010000032.1 <> na Primary Assembly 805000 na scaffold_33 unplaced-scaffold na na JAULSH010000033.1 <> na Primary Assembly 803000 na scaffold_34 unplaced-scaffold na na JAULSH010000034.1 <> na Primary Assembly 717416 na scaffold_35 unplaced-scaffold na na JAULSH010000035.1 <> na Primary Assembly 701134 na scaffold_36 unplaced-scaffold na na JAULSH010000036.1 <> na Primary Assembly 687722 na scaffold_37 unplaced-scaffold na na JAULSH010000037.1 <> na Primary Assembly 600818 na scaffold_38 unplaced-scaffold na na JAULSH010000038.1 <> na Primary Assembly 563965 na scaffold_39 unplaced-scaffold na na JAULSH010000039.1 <> na Primary Assembly 555363 na scaffold_4 unplaced-scaffold na na JAULSH010000004.1 <> na Primary Assembly 149477722 na scaffold_40 unplaced-scaffold na na JAULSH010000040.1 <> na Primary Assembly 511308 na scaffold_41 unplaced-scaffold na na JAULSH010000041.1 <> na Primary Assembly 509397 na scaffold_42 unplaced-scaffold na na JAULSH010000042.1 <> na Primary Assembly 465119 na scaffold_43 unplaced-scaffold na na JAULSH010000043.1 <> na Primary Assembly 413853 na scaffold_44 unplaced-scaffold na na JAULSH010000044.1 <> na Primary Assembly 404549 na scaffold_45 unplaced-scaffold na na JAULSH010000045.1 <> na Primary Assembly 403480 na scaffold_46 unplaced-scaffold na na JAULSH010000046.1 <> na Primary Assembly 353541 na scaffold_47 unplaced-scaffold na na JAULSH010000047.1 <> na Primary Assembly 345156 na scaffold_48 unplaced-scaffold na na JAULSH010000048.1 <> na Primary Assembly 310491 na scaffold_49 unplaced-scaffold na na JAULSH010000049.1 <> na Primary Assembly 304588 na scaffold_5 unplaced-scaffold na na JAULSH010000005.1 <> na Primary Assembly 147668142 na scaffold_50 unplaced-scaffold na na JAULSH010000050.1 <> na Primary Assembly 301161 na scaffold_51 unplaced-scaffold na na JAULSH010000051.1 <> na Primary Assembly 245067 na scaffold_52 unplaced-scaffold na na JAULSH010000052.1 <> na Primary Assembly 213309 na scaffold_53 unplaced-scaffold na na JAULSH010000053.1 <> na Primary Assembly 206110 na scaffold_54 unplaced-scaffold na na JAULSH010000054.1 <> na Primary Assembly 170894 na scaffold_55 unplaced-scaffold na na JAULSH010000055.1 <> na Primary Assembly 167708 na scaffold_56 unplaced-scaffold na na JAULSH010000056.1 <> na Primary Assembly 164179 na scaffold_57 unplaced-scaffold na na JAULSH010000057.1 <> na Primary Assembly 147000 na scaffold_58 unplaced-scaffold na na JAULSH010000058.1 <> na Primary Assembly 142477 na scaffold_59 unplaced-scaffold na na JAULSH010000059.1 <> na Primary Assembly 135000 na scaffold_6 unplaced-scaffold na na JAULSH010000006.1 <> na Primary Assembly 136156154 na scaffold_60 unplaced-scaffold na na JAULSH010000060.1 <> na Primary Assembly 133000 na scaffold_61 unplaced-scaffold na na JAULSH010000061.1 <> na Primary Assembly 131393 na scaffold_62 unplaced-scaffold na na JAULSH010000062.1 <> na Primary Assembly 131000 na scaffold_63 unplaced-scaffold na na JAULSH010000063.1 <> na Primary Assembly 130757 na scaffold_64 unplaced-scaffold na na JAULSH010000064.1 <> na Primary Assembly 129806 na scaffold_65 unplaced-scaffold na na JAULSH010000065.1 <> na Primary Assembly 127000 na scaffold_66 unplaced-scaffold na na JAULSH010000066.1 <> na Primary Assembly 126354 na scaffold_67 unplaced-scaffold na na JAULSH010000067.1 <> na Primary Assembly 123371 na scaffold_68 unplaced-scaffold na na JAULSH010000068.1 <> na Primary Assembly 119779 na scaffold_69 unplaced-scaffold na na JAULSH010000069.1 <> na Primary Assembly 117305 na scaffold_7 unplaced-scaffold na na JAULSH010000007.1 <> na Primary Assembly 130325618 na scaffold_70 unplaced-scaffold na na JAULSH010000070.1 <> na Primary Assembly 117258 na scaffold_71 unplaced-scaffold na na JAULSH010000071.1 <> na Primary Assembly 110375 na scaffold_72 unplaced-scaffold na na JAULSH010000072.1 <> na Primary Assembly 104346 na scaffold_73 unplaced-scaffold na na JAULSH010000073.1 <> na Primary Assembly 89000 na scaffold_74 unplaced-scaffold na na JAULSH010000074.1 <> na Primary Assembly 87517 na scaffold_75 unplaced-scaffold na na JAULSH010000075.1 <> na Primary Assembly 80000 na scaffold_76 unplaced-scaffold na na JAULSH010000076.1 <> na Primary Assembly 76789 na scaffold_77 unplaced-scaffold na na JAULSH010000077.1 <> na Primary Assembly 76000 na scaffold_78 unplaced-scaffold na na JAULSH010000078.1 <> na Primary Assembly 71000 na scaffold_79 unplaced-scaffold na na JAULSH010000079.1 <> na Primary Assembly 70419 na scaffold_8 unplaced-scaffold na na JAULSH010000008.1 <> na Primary Assembly 127770522 na scaffold_80 unplaced-scaffold na na JAULSH010000080.1 <> na Primary Assembly 70000 na scaffold_81 unplaced-scaffold na na JAULSH010000081.1 <> na Primary Assembly 66919 na scaffold_82 unplaced-scaffold na na JAULSH010000082.1 <> na Primary Assembly 66000 na scaffold_83 unplaced-scaffold na na JAULSH010000083.1 <> na Primary Assembly 63794 na scaffold_84 unplaced-scaffold na na JAULSH010000084.1 <> na Primary Assembly 62539 na scaffold_85 unplaced-scaffold na na JAULSH010000085.1 <> na Primary Assembly 61000 na scaffold_86 unplaced-scaffold na na JAULSH010000086.1 <> na Primary Assembly 57000 na scaffold_87 unplaced-scaffold na na JAULSH010000087.1 <> na Primary Assembly 50000 na scaffold_88 unplaced-scaffold na na JAULSH010000088.1 <> na Primary Assembly 43682 na scaffold_89 unplaced-scaffold na na JAULSH010000089.1 <> na Primary Assembly 37000 na scaffold_9 unplaced-scaffold na na JAULSH010000009.1 <> na Primary Assembly 126221231 na scaffold_90 unplaced-scaffold na na JAULSH010000090.1 <> na Primary Assembly 35913 na scaffold_91 unplaced-scaffold na na JAULSH010000091.1 <> na Primary Assembly 32690 na scaffold_92 unplaced-scaffold na na JAULSH010000092.1 <> na Primary Assembly 31345 na scaffold_93 unplaced-scaffold na na JAULSH010000093.1 <> na Primary Assembly 29923 na scaffold_94 unplaced-scaffold na na JAULSH010000094.1 <> na Primary Assembly 26465 na scaffold_95 unplaced-scaffold na na JAULSH010000095.1 <> na Primary Assembly 21865 na scaffold_96 unplaced-scaffold na na JAULSH010000096.1 <> na Primary Assembly 21157 na scaffold_97 unplaced-scaffold na na JAULSH010000097.1 <> na Primary Assembly 19000 na scaffold_98 unplaced-scaffold na na JAULSH010000098.1 <> na Primary Assembly 17035 na scaffold_99 unplaced-scaffold na na JAULSH010000099.1 <> na Primary Assembly 16749 na