# Assembly name:  TgRH_pasteur
# Organism name:  Toxoplasma gondii (apicomplexans)
# Infraspecific name:  strain=delta Ku80
# Isolate:  RH
# Taxid:          5811
# BioSample:      SAMN37260401
# BioProject:     PRJNA597814
# Submitter:      Institut Pasteur de Montevideo
# Date:           2023-11-02
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JAVJAM01
# Assembly method: CANU v. 1.9
# Expected final version: yes
# Genome coverage: 60.0x
# Sequencing technology: PacBio RSII; Oxford Nanopore MinION
# GenBank assembly accession: GCA_033216535.1
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_033216545.1		Primary Assembly
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
TgRH.13	assembled-molecule	Ia	Chromosome	CM065576.1	<>	na	Primary Assembly	1864358	na
TgRH.12	assembled-molecule	Ib	Chromosome	CM065577.1	<>	na	Primary Assembly	2031852	na
TgRH.11	assembled-molecule	II	Chromosome	CM065578.1	<>	na	Primary Assembly	2450754	na
TgRH.10	assembled-molecule	III	Chromosome	CM065579.1	<>	na	Primary Assembly	2643058	na
TgRH.9	assembled-molecule	IV	Chromosome	CM065580.1	<>	na	Primary Assembly	2695256	na
TgRH.8	assembled-molecule	V	Chromosome	CM065581.1	<>	na	Primary Assembly	3439191	na
TgRH.7	assembled-molecule	VI	Chromosome	CM065582.1	<>	na	Primary Assembly	3802196	na
TgRH.6	assembled-molecule	VIIa	Chromosome	CM065583.1	<>	na	Primary Assembly	4653937	na
TgRH.1	assembled-molecule	VIII	Chromosome	CM065584.1	<>	na	Primary Assembly	12128471	na
TgRH.5	assembled-molecule	IX	Chromosome	CM065585.1	<>	na	Primary Assembly	6601016	na
TgRH.2	assembled-molecule	X	Chromosome	CM065586.1	<>	na	Primary Assembly	7754889	na
TgRH.4	assembled-molecule	XI	Chromosome	CM065587.1	<>	na	Primary Assembly	6701673	na
TgRH.3	assembled-molecule	XII	Chromosome	CM065588.1	<>	na	Primary Assembly	7235803	na
TgRH_scaff.1	unplaced-scaffold	na	na	JAVJAM010000014.1	<>	na	Primary Assembly	110949	na
TgRH_scaff.2	unplaced-scaffold	na	na	JAVJAM010000015.1	<>	na	Primary Assembly	82817	na
TgRH_scaff.3	unplaced-scaffold	na	na	JAVJAM010000016.1	<>	na	Primary Assembly	70422	na
TgRH_scaff.4	unplaced-scaffold	na	na	JAVJAM010000017.1	<>	na	Primary Assembly	71815	na
TgRH_scaff.5	unplaced-scaffold	na	na	JAVJAM010000018.1	<>	na	Primary Assembly	68554	na
TgRH_scaff.6	unplaced-scaffold	na	na	JAVJAM010000019.1	<>	na	Primary Assembly	61158	na
TgRH_scaff.7	unplaced-scaffold	na	na	JAVJAM010000020.1	<>	na	Primary Assembly	56986	na
TgRH_scaff.8	unplaced-scaffold	na	na	JAVJAM010000021.1	<>	na	Primary Assembly	55954	na
TgRH_scaff.9	unplaced-scaffold	na	na	JAVJAM010000022.1	<>	na	Primary Assembly	52920	na
TgRH_scaff.10	unplaced-scaffold	na	na	JAVJAM010000023.1	<>	na	Primary Assembly	45370	na
TgRH_scaff.11	unplaced-scaffold	na	na	JAVJAM010000024.1	<>	na	Primary Assembly	50689	na
TgRH_scaff.12	unplaced-scaffold	na	na	JAVJAM010000025.1	<>	na	Primary Assembly	44375	na
TgRH_scaff.13	unplaced-scaffold	na	na	JAVJAM010000026.1	<>	na	Primary Assembly	37790	na
TgRH_scaff.14	unplaced-scaffold	na	na	JAVJAM010000027.1	<>	na	Primary Assembly	36942	na
TgRH_scaff.15	unplaced-scaffold	na	na	JAVJAM010000028.1	<>	na	Primary Assembly	36550	na
TgRH_scaff.16	unplaced-scaffold	na	na	JAVJAM010000029.1	<>	na	Primary Assembly	35309	na
TgRH_scaff.17	unplaced-scaffold	na	na	JAVJAM010000030.1	<>	na	Primary Assembly	34002	na
TgRH_scaff.18	unplaced-scaffold	na	na	JAVJAM010000031.1	<>	na	Primary Assembly	33569	na
TgRH_scaff.19	unplaced-scaffold	na	na	JAVJAM010000032.1	<>	na	Primary Assembly	30578	na
TgRH_scaff.20	unplaced-scaffold	na	na	JAVJAM010000033.1	<>	na	Primary Assembly	30561	na
TgRH_scaff.21	unplaced-scaffold	na	na	JAVJAM010000034.1	<>	na	Primary Assembly	29345	na
TgRH_scaff.22	unplaced-scaffold	na	na	JAVJAM010000035.1	<>	na	Primary Assembly	27407	na
TgRH_scaff.23	unplaced-scaffold	na	na	JAVJAM010000036.1	<>	na	Primary Assembly	26228	na
TgRH_scaff.24	unplaced-scaffold	na	na	JAVJAM010000037.1	<>	na	Primary Assembly	19748	na
TgRH_scaff.25	unplaced-scaffold	na	na	JAVJAM010000038.1	<>	na	Primary Assembly	23885	na
TgRH_scaff.26	unplaced-scaffold	na	na	JAVJAM010000039.1	<>	na	Primary Assembly	18707	na
TgRH_scaff.27	unplaced-scaffold	na	na	JAVJAM010000040.1	<>	na	Primary Assembly	20330	na
TgRH_scaff.28	unplaced-scaffold	na	na	JAVJAM010000041.1	<>	na	Primary Assembly	19386	na
TgRH_scaff.29	unplaced-scaffold	na	na	JAVJAM010000042.1	<>	na	Primary Assembly	19343	na
TgRH_scaff.30	unplaced-scaffold	na	na	JAVJAM010000043.1	<>	na	Primary Assembly	18751	na
TgRH_scaff.31	unplaced-scaffold	na	na	JAVJAM010000044.1	<>	na	Primary Assembly	17559	na
TgRH_scaff.32	unplaced-scaffold	na	na	JAVJAM010000045.1	<>	na	Primary Assembly	17397	na
TgRH_scaff.33	unplaced-scaffold	na	na	JAVJAM010000046.1	<>	na	Primary Assembly	13484	na