# Assembly name: klBraLanc5.hap2 # Organism name: Branchiostoma lanceolatum (amphioxus) # Isolate: klBraLanc5 # Sex: female # Taxid: 7740 # BioSample: SAMN38372375 # BioProject: PRJNA1044120 # Submitter: Vertebrate Genomes Project # Date: 2024-01-05 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAXKVS01 # Assembly method: Hifiasm + Hi-C phasing v. 0.19.3 + galaxy0; YAHS Hi-C scaffolding v. 0.19.3 + galaxy0; Curation v. 2023-06-21 # Expected final version: no # Genome coverage: 87.25x # Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2 # GenBank assembly accession: GCA_035083965.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_035084015.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM068847.1 <> na Primary Assembly 44478171 na SUPER_2 assembled-molecule 2 Chromosome CM068848.1 <> na Primary Assembly 40414955 na SUPER_3 assembled-molecule 3 Chromosome CM068849.1 <> na Primary Assembly 34449865 na SUPER_4 assembled-molecule 4 Chromosome CM068850.1 <> na Primary Assembly 33141815 na SUPER_5 assembled-molecule 5 Chromosome CM068851.1 <> na Primary Assembly 25723763 na SUPER_6 assembled-molecule 6 Chromosome CM068852.1 <> na Primary Assembly 24147288 na SUPER_7 assembled-molecule 7 Chromosome CM068853.1 <> na Primary Assembly 24017008 na SUPER_8 assembled-molecule 8 Chromosome CM068854.1 <> na Primary Assembly 22634557 na SUPER_9 assembled-molecule 9 Chromosome CM068855.1 <> na Primary Assembly 22385587 na SUPER_10 assembled-molecule 10 Chromosome CM068856.1 <> na Primary Assembly 20566309 na SUPER_11 assembled-molecule 11 Chromosome CM068857.1 <> na Primary Assembly 19392235 na SUPER_12 assembled-molecule 12 Chromosome CM068858.1 <> na Primary Assembly 19320467 na SUPER_13 assembled-molecule 13 Chromosome CM068859.1 <> na Primary Assembly 20012688 na SUPER_14 assembled-molecule 14 Chromosome CM068860.1 <> na Primary Assembly 18547751 na SUPER_15 assembled-molecule 15 Chromosome CM068861.1 <> na Primary Assembly 18684190 na SUPER_16 assembled-molecule 16 Chromosome CM068862.1 <> na Primary Assembly 16774291 na SUPER_17 assembled-molecule 17 Chromosome CM068863.1 <> na Primary Assembly 20408527 na SUPER_18 assembled-molecule 18 Chromosome CM068864.1 <> na Primary Assembly 16375685 na SUPER_19 assembled-molecule 19 Chromosome CM068865.1 <> na Primary Assembly 16034363 na SUPER_8_unloc_2 unlocalized-scaffold 8 Chromosome JAXKVS010000022.1 <> na Primary Assembly 42345 na SUPER_8_unloc_1 unlocalized-scaffold 8 Chromosome JAXKVS010000024.1 <> na Primary Assembly 40050 na SUPER_18_unloc_1 unlocalized-scaffold 18 Chromosome JAXKVS010000020.1 <> na Primary Assembly 267671 na Scaffold_73 unplaced-scaffold na na JAXKVS010000021.1 <> na Primary Assembly 52625 na Scaffold_74 unplaced-scaffold na na JAXKVS010000023.1 <> na Primary Assembly 41175 na Scaffold_75 unplaced-scaffold na na JAXKVS010000025.1 <> na Primary Assembly 39976 na Scaffold_76 unplaced-scaffold na na JAXKVS010000026.1 <> na Primary Assembly 39061 na Scaffold_77 unplaced-scaffold na na JAXKVS010000027.1 <> na Primary Assembly 35941 na Scaffold_78 unplaced-scaffold na na JAXKVS010000028.1 <> na Primary Assembly 35888 na Scaffold_79 unplaced-scaffold na na JAXKVS010000029.1 <> na Primary Assembly 35116 na Scaffold_80 unplaced-scaffold na na JAXKVS010000030.1 <> na Primary Assembly 34268 na Scaffold_81 unplaced-scaffold na na JAXKVS010000031.1 <> na Primary Assembly 33528 na Scaffold_82 unplaced-scaffold na na JAXKVS010000032.1 <> na Primary Assembly 33484 na Scaffold_83 unplaced-scaffold na na JAXKVS010000033.1 <> na Primary Assembly 26455 na Scaffold_84 unplaced-scaffold na na JAXKVS010000034.1 <> na Primary Assembly 20418 na