# Assembly name: bHelExo1.hap2 # Organism name: Heliangelus exortis (birds) # Isolate: bHelExo1 # Sex: female # Taxid: 472823 # BioSample: SAMN37253778 # BioProject: PRJNA1012325 # Submitter: Vertebrate Genomes Project # Date: 2024-01-26 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAVJNL01 # Assembly method: Hifiasm + Hi-C phasing v. 0.19.3 + galaxy0; purge_dups v. 1.2.6 + galaxy0; yahs v. 1.2a.2 + galaxy0 # Expected final version: no # Genome coverage: 47.0x # Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2 # GenBank assembly accession: GCA_036172335.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_036172405.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM069805.1 <> na Primary Assembly 197094454 na SUPER_2 assembled-molecule 2 Chromosome CM069806.1 <> na Primary Assembly 150173037 na SUPER_3 assembled-molecule 3 Chromosome CM069807.1 <> na Primary Assembly 115537761 na SUPER_4 assembled-molecule 4 Chromosome CM069808.1 <> na Primary Assembly 44470594 na SUPER_5 assembled-molecule 5 Chromosome CM069809.1 <> na Primary Assembly 41326368 na SUPER_6 assembled-molecule 6 Chromosome CM069810.1 <> na Primary Assembly 38988209 na SUPER_7 assembled-molecule 7 Chromosome CM069811.1 <> na Primary Assembly 34832769 na SUPER_8 assembled-molecule 8 Chromosome CM069812.1 <> na Primary Assembly 30916348 na SUPER_9 assembled-molecule 9 Chromosome CM069813.1 <> na Primary Assembly 26132576 na SUPER_10 assembled-molecule 10 Chromosome CM069814.1 <> na Primary Assembly 22977020 na SUPER_11 assembled-molecule 11 Chromosome CM069815.1 <> na Primary Assembly 22600065 na SUPER_12 assembled-molecule 12 Chromosome CM069816.1 <> na Primary Assembly 21430584 na SUPER_13 assembled-molecule 13 Chromosome CM069817.1 <> na Primary Assembly 20676940 na SUPER_14 assembled-molecule 14 Chromosome CM069818.1 <> na Primary Assembly 18807372 na SUPER_15 assembled-molecule 15 Chromosome CM069819.1 <> na Primary Assembly 17609137 na SUPER_16 assembled-molecule 16 Chromosome CM069820.1 <> na Primary Assembly 15416605 na SUPER_17 assembled-molecule 17 Chromosome CM069821.1 <> na Primary Assembly 15684582 na SUPER_18 assembled-molecule 18 Chromosome CM069822.1 <> na Primary Assembly 16244252 na SUPER_19 assembled-molecule 19 Chromosome CM069823.1 <> na Primary Assembly 14028679 na SUPER_20 assembled-molecule 20 Chromosome CM069824.1 <> na Primary Assembly 10967362 na SUPER_21 assembled-molecule 21 Chromosome CM069825.1 <> na Primary Assembly 11224311 na SUPER_22 assembled-molecule 22 Chromosome CM069826.1 <> na Primary Assembly 10962298 na SUPER_23 assembled-molecule 23 Chromosome CM069827.1 <> na Primary Assembly 8104301 na SUPER_24 assembled-molecule 24 Chromosome CM069828.1 <> na Primary Assembly 6616843 na SUPER_25 assembled-molecule 25 Chromosome CM069829.1 <> na Primary Assembly 6359912 na SUPER_26 assembled-molecule 26 Chromosome CM069830.1 <> na Primary Assembly 6748114 na SUPER_27 assembled-molecule 27 Chromosome CM069831.1 <> na Primary Assembly 2971476 na SUPER_29 assembled-molecule 29 Chromosome CM069832.1 <> na Primary Assembly 5359032 na SUPER_30 assembled-molecule 30 Chromosome CM069833.1 <> na Primary Assembly 5242944 na SUPER_31 assembled-molecule 31 Chromosome CM069834.1 <> na Primary Assembly 2288584 na SUPER_20_unloc_1 unlocalized-scaffold 20 Chromosome JAVJNL010000034.1 <> na Primary Assembly 981956 na SUEPER_28 unplaced-scaffold na na JAVJNL010000027.1 <> na Primary Assembly 5673623 na Scaffold_128 unplaced-scaffold na na JAVJNL010000036.1 <> na Primary Assembly 493053 na Scaffold_133 unplaced-scaffold na na JAVJNL010000035.1 <> na Primary Assembly 768378 na Scaffold_134 unplaced-scaffold na na JAVJNL010000033.1 <> na Primary Assembly 1231922 na Scaffold_136 unplaced-scaffold na na JAVJNL010000032.1 <> na Primary Assembly 1552123 na Scaffold_137 unplaced-scaffold na na JAVJNL010000037.1 <> na Primary Assembly 148037 na Scaffold_138 unplaced-scaffold na na JAVJNL010000038.1 <> na Primary Assembly 588220 na Scaffold_139 unplaced-scaffold na na JAVJNL010000039.1 <> na Primary Assembly 451219 na Scaffold_140 unplaced-scaffold na na JAVJNL010000040.1 <> na Primary Assembly 447727 na Scaffold_141 unplaced-scaffold na na JAVJNL010000041.1 <> na Primary Assembly 421890 na Scaffold_142 unplaced-scaffold na na JAVJNL010000042.1 <> na Primary Assembly 407957 na Scaffold_143 unplaced-scaffold na na JAVJNL010000043.1 <> na Primary Assembly 373935 na Scaffold_144 unplaced-scaffold na na JAVJNL010000044.1 <> na Primary Assembly 332809 na Scaffold_145 unplaced-scaffold na na JAVJNL010000045.1 <> na Primary Assembly 326781 na Scaffold_146 unplaced-scaffold na na JAVJNL010000046.1 <> na Primary Assembly 310422 na Scaffold_147 unplaced-scaffold na na JAVJNL010000047.1 <> na Primary Assembly 295342 na Scaffold_148 unplaced-scaffold na na JAVJNL010000048.1 <> na Primary Assembly 283813 na Scaffold_149 unplaced-scaffold na na JAVJNL010000049.1 <> na Primary Assembly 276379 na Scaffold_150 unplaced-scaffold na na JAVJNL010000050.1 <> na Primary Assembly 271047 na Scaffold_151 unplaced-scaffold na na JAVJNL010000051.1 <> na Primary Assembly 260437 na Scaffold_152 unplaced-scaffold na na JAVJNL010000052.1 <> na Primary Assembly 252386 na Scaffold_153 unplaced-scaffold na na JAVJNL010000053.1 <> na Primary Assembly 251140 na Scaffold_154 unplaced-scaffold na na JAVJNL010000054.1 <> na Primary Assembly 229343 na Scaffold_155 unplaced-scaffold na na JAVJNL010000055.1 <> na Primary Assembly 224404 na Scaffold_156 unplaced-scaffold na na JAVJNL010000056.1 <> na Primary Assembly 221342 na Scaffold_157 unplaced-scaffold na na JAVJNL010000057.1 <> na Primary Assembly 219176 na Scaffold_158 unplaced-scaffold na na JAVJNL010000058.1 <> na Primary Assembly 204578 na Scaffold_159 unplaced-scaffold na na JAVJNL010000059.1 <> na Primary Assembly 203076 na Scaffold_160 unplaced-scaffold na na JAVJNL010000060.1 <> na Primary Assembly 197592 na Scaffold_161 unplaced-scaffold na na JAVJNL010000061.1 <> na Primary Assembly 194240 na Scaffold_162 unplaced-scaffold na na JAVJNL010000062.1 <> na Primary Assembly 191207 na Scaffold_163 unplaced-scaffold na na JAVJNL010000063.1 <> na Primary Assembly 189261 na Scaffold_164 unplaced-scaffold na na JAVJNL010000065.1 <> na Primary Assembly 177082 na Scaffold_165 unplaced-scaffold na na JAVJNL010000064.1 <> na Primary Assembly 177334 na Scaffold_166 unplaced-scaffold na na JAVJNL010000066.1 <> na Primary Assembly 175404 na Scaffold_167 unplaced-scaffold na na JAVJNL010000067.1 <> na Primary Assembly 169143 na Scaffold_168 unplaced-scaffold na na JAVJNL010000068.1 <> na Primary Assembly 167353 na Scaffold_169 unplaced-scaffold na na JAVJNL010000069.1 <> na Primary Assembly 166562 na Scaffold_170 unplaced-scaffold na na JAVJNL010000070.1 <> na Primary Assembly 163827 na Scaffold_171 unplaced-scaffold na na JAVJNL010000071.1 <> na Primary Assembly 163808 na Scaffold_172 unplaced-scaffold na na JAVJNL010000072.1 <> na Primary Assembly 158257 na Scaffold_173 unplaced-scaffold na na JAVJNL010000073.1 <> na Primary Assembly 150210 na Scaffold_174 unplaced-scaffold na na JAVJNL010000074.1 <> na Primary Assembly 148151 na Scaffold_175 unplaced-scaffold na na JAVJNL010000075.1 <> na Primary Assembly 146185 na Scaffold_176 unplaced-scaffold na na JAVJNL010000076.1 <> na Primary Assembly 136760 na Scaffold_177 unplaced-scaffold na na JAVJNL010000077.1 <> na Primary Assembly 134665 na Scaffold_178 unplaced-scaffold na na JAVJNL010000078.1 <> na Primary Assembly 130132 na Scaffold_179 unplaced-scaffold na na JAVJNL010000079.1 <> na Primary Assembly 127334 na Scaffold_180 unplaced-scaffold na na JAVJNL010000080.1 <> na Primary Assembly 123496 na Scaffold_181 unplaced-scaffold na na JAVJNL010000081.1 <> na Primary Assembly 122984 na Scaffold_182 unplaced-scaffold na na JAVJNL010000082.1 <> na Primary Assembly 121299 na Scaffold_183 unplaced-scaffold na na JAVJNL010000083.1 <> na Primary Assembly 120889 na Scaffold_184 unplaced-scaffold na na JAVJNL010000084.1 <> na Primary Assembly 120035 na Scaffold_185 unplaced-scaffold na na JAVJNL010000085.1 <> na Primary Assembly 119399 na Scaffold_186 unplaced-scaffold na na JAVJNL010000086.1 <> na Primary Assembly 117735 na Scaffold_187 unplaced-scaffold na na JAVJNL010000087.1 <> na Primary Assembly 112993 na Scaffold_188 unplaced-scaffold na na JAVJNL010000088.1 <> na Primary Assembly 111169 na Scaffold_189 unplaced-scaffold na na JAVJNL010000089.1 <> na Primary Assembly 106061 na Scaffold_190 unplaced-scaffold na na JAVJNL010000090.1 <> na Primary Assembly 103409 na Scaffold_191 unplaced-scaffold na na JAVJNL010000092.1 <> na Primary Assembly 99704 na Scaffold_192 unplaced-scaffold na na JAVJNL010000091.1 <> na Primary Assembly 99989 na Scaffold_193 unplaced-scaffold na na JAVJNL010000093.1 <> na Primary Assembly 98530 na Scaffold_194 unplaced-scaffold na na JAVJNL010000094.1 <> na Primary Assembly 95107 na Scaffold_195 unplaced-scaffold na na JAVJNL010000095.1 <> na Primary Assembly 93801 na Scaffold_196 unplaced-scaffold na na JAVJNL010000096.1 <> na Primary Assembly 92468 na Scaffold_197 unplaced-scaffold na na JAVJNL010000097.1 <> na Primary Assembly 92392 na Scaffold_198 unplaced-scaffold na na JAVJNL010000098.1 <> na Primary Assembly 91932 na Scaffold_199 unplaced-scaffold na na JAVJNL010000099.1 <> na Primary Assembly 87783 na Scaffold_200 unplaced-scaffold na na JAVJNL010000100.1 <> na Primary Assembly 86871 na Scaffold_201 unplaced-scaffold na na JAVJNL010000101.1 <> na Primary Assembly 86440 na Scaffold_202 unplaced-scaffold na na JAVJNL010000102.1 <> na Primary Assembly 85991 na Scaffold_203 unplaced-scaffold na na JAVJNL010000103.1 <> na Primary Assembly 84649 na Scaffold_204 unplaced-scaffold na na JAVJNL010000104.1 <> na Primary Assembly 84180 na Scaffold_205 unplaced-scaffold na na JAVJNL010000105.1 <> na Primary Assembly 83617 na Scaffold_206 unplaced-scaffold na na JAVJNL010000106.1 <> na Primary Assembly 77473 na Scaffold_207 unplaced-scaffold na na JAVJNL010000107.1 <> na Primary Assembly 76585 na Scaffold_208 unplaced-scaffold na na JAVJNL010000109.1 <> na Primary Assembly 75666 na Scaffold_209 unplaced-scaffold na na JAVJNL010000108.1 <> na Primary Assembly 75858 na Scaffold_210 unplaced-scaffold na na JAVJNL010000111.1 <> na Primary Assembly 74313 na Scaffold_211 unplaced-scaffold na na JAVJNL010000110.1 <> na Primary Assembly 74319 na Scaffold_212 unplaced-scaffold na na JAVJNL010000112.1 <> na Primary Assembly 73986 na Scaffold_213 unplaced-scaffold na na JAVJNL010000113.1 <> na Primary Assembly 73092 na Scaffold_214 unplaced-scaffold na na JAVJNL010000114.1 <> na Primary Assembly 72519 na Scaffold_215 unplaced-scaffold na na JAVJNL010000115.1 <> na Primary Assembly 72303 na Scaffold_216 unplaced-scaffold na na JAVJNL010000116.1 <> na Primary Assembly 71526 na Scaffold_217 unplaced-scaffold na na JAVJNL010000117.1 <> na Primary Assembly 68692 na Scaffold_218 unplaced-scaffold na na JAVJNL010000118.1 <> na Primary Assembly 68245 na Scaffold_219 unplaced-scaffold na na JAVJNL010000119.1 <> na Primary Assembly 68134 na Scaffold_220 unplaced-scaffold na na JAVJNL010000120.1 <> na Primary Assembly 67267 na Scaffold_221 unplaced-scaffold na na JAVJNL010000122.1 <> na Primary Assembly 65819 na Scaffold_222 unplaced-scaffold na na JAVJNL010000121.1 <> na Primary Assembly 66197 na Scaffold_223 unplaced-scaffold na na JAVJNL010000123.1 <> na Primary Assembly 65246 na Scaffold_224 unplaced-scaffold na na JAVJNL010000124.1 <> na Primary Assembly 64259 na Scaffold_225 unplaced-scaffold na na JAVJNL010000125.1 <> na Primary Assembly 64206 na Scaffold_226 unplaced-scaffold na na JAVJNL010000126.1 <> na Primary Assembly 63750 na Scaffold_227 unplaced-scaffold na na JAVJNL010000127.1 <> na Primary Assembly 63589 na Scaffold_228 unplaced-scaffold na na JAVJNL010000128.1 <> na Primary Assembly 63126 na Scaffold_229 unplaced-scaffold na na JAVJNL010000129.1 <> na Primary Assembly 62889 na Scaffold_230 unplaced-scaffold na na JAVJNL010000130.1 <> na Primary Assembly 62394 na Scaffold_231 unplaced-scaffold na na JAVJNL010000132.1 <> na Primary Assembly 61357 na Scaffold_232 unplaced-scaffold na na JAVJNL010000131.1 <> na Primary Assembly 62131 na Scaffold_233 unplaced-scaffold na na JAVJNL010000133.1 <> na Primary Assembly 60503 na Scaffold_234 unplaced-scaffold na na JAVJNL010000134.1 <> na Primary Assembly 60019 na Scaffold_235 unplaced-scaffold na na JAVJNL010000135.1 <> na Primary Assembly 59043 na Scaffold_236 unplaced-scaffold na na JAVJNL010000137.1 <> na Primary Assembly 58716 na Scaffold_237 unplaced-scaffold na na JAVJNL010000138.1 <> na Primary Assembly 57844 na Scaffold_238 unplaced-scaffold na na JAVJNL010000139.1 <> na Primary Assembly 57594 na Scaffold_239 unplaced-scaffold na na JAVJNL010000140.1 <> na Primary Assembly 56417 na Scaffold_240 unplaced-scaffold na na JAVJNL010000141.1 <> na Primary Assembly 55780 na Scaffold_241 unplaced-scaffold na na JAVJNL010000142.1 <> na Primary Assembly 54308 na Scaffold_242 unplaced-scaffold na na JAVJNL010000143.1 <> na Primary Assembly 52313 na Scaffold_243 unplaced-scaffold na na JAVJNL010000144.1 <> na Primary Assembly 51487 na Scaffold_244 unplaced-scaffold na na JAVJNL010000145.1 <> na Primary Assembly 51180 na Scaffold_245 unplaced-scaffold na na JAVJNL010000147.1 <> na Primary Assembly 50725 na Scaffold_246 unplaced-scaffold na na JAVJNL010000148.1 <> na Primary Assembly 47514 na Scaffold_247 unplaced-scaffold na na JAVJNL010000149.1 <> na Primary Assembly 47024 na Scaffold_248 unplaced-scaffold na na JAVJNL010000150.1 <> na Primary Assembly 46551 na Scaffold_249 unplaced-scaffold na na JAVJNL010000151.1 <> na Primary Assembly 45478 na Scaffold_250 unplaced-scaffold na na JAVJNL010000152.1 <> na Primary Assembly 45011 na Scaffold_251 unplaced-scaffold na na JAVJNL010000154.1 <> na Primary Assembly 44471 na Scaffold_252 unplaced-scaffold na na JAVJNL010000155.1 <> na Primary Assembly 44091 na Scaffold_253 unplaced-scaffold na na JAVJNL010000156.1 <> na Primary Assembly 43521 na Scaffold_254 unplaced-scaffold na na JAVJNL010000158.1 <> na Primary Assembly 42376 na Scaffold_255 unplaced-scaffold na na JAVJNL010000159.1 <> na Primary Assembly 42337 na Scaffold_256 unplaced-scaffold na na JAVJNL010000161.1 <> na Primary Assembly 41907 na Scaffold_257 unplaced-scaffold na na JAVJNL010000162.1 <> na Primary Assembly 39003 na Scaffold_258 unplaced-scaffold na na JAVJNL010000164.1 <> na Primary Assembly 38012 na Scaffold_259 unplaced-scaffold na na JAVJNL010000165.1 <> na Primary Assembly 37528 na Scaffold_260 unplaced-scaffold na na JAVJNL010000167.1 <> na Primary Assembly 36429 na Scaffold_261 unplaced-scaffold na na JAVJNL010000169.1 <> na Primary Assembly 35547 na Scaffold_262 unplaced-scaffold na na JAVJNL010000171.1 <> na Primary Assembly 35252 na Scaffold_263 unplaced-scaffold na na JAVJNL010000172.1 <> na Primary Assembly 34951 na Scaffold_264 unplaced-scaffold na na JAVJNL010000175.1 <> na Primary Assembly 32807 na Scaffold_265 unplaced-scaffold na na JAVJNL010000176.1 <> na Primary Assembly 32737 na Scaffold_266 unplaced-scaffold na na JAVJNL010000178.1 <> na Primary Assembly 32236 na Scaffold_267 unplaced-scaffold na na JAVJNL010000180.1 <> na Primary Assembly 30640 na Scaffold_268 unplaced-scaffold na na JAVJNL010000182.1 <> na Primary Assembly 28859 na Scaffold_269 unplaced-scaffold na na JAVJNL010000184.1 <> na Primary Assembly 28566 na Scaffold_270 unplaced-scaffold na na JAVJNL010000186.1 <> na Primary Assembly 27136 na Scaffold_271 unplaced-scaffold na na JAVJNL010000189.1 <> na Primary Assembly 25817 na Scaffold_272 unplaced-scaffold na na JAVJNL010000191.1 <> na Primary Assembly 24811 na Scaffold_273 unplaced-scaffold na na JAVJNL010000194.1 <> na Primary Assembly 22787 na Scaffold_274 unplaced-scaffold na na JAVJNL010000197.1 <> na Primary Assembly 19940 na Scaffold_275 unplaced-scaffold na na JAVJNL010000200.1 <> na Primary Assembly 12145 na Scaffold_304 unplaced-scaffold na na JAVJNL010000136.1 <> na Primary Assembly 58951 na Scaffold_305 unplaced-scaffold na na JAVJNL010000146.1 <> na Primary Assembly 50757 na Scaffold_307 unplaced-scaffold na na JAVJNL010000153.1 <> na Primary Assembly 44690 na Scaffold_308 unplaced-scaffold na na JAVJNL010000157.1 <> na Primary Assembly 42852 na Scaffold_309 unplaced-scaffold na na JAVJNL010000160.1 <> na Primary Assembly 42281 na Scaffold_310 unplaced-scaffold na na JAVJNL010000163.1 <> na Primary Assembly 38021 na Scaffold_311 unplaced-scaffold na na JAVJNL010000166.1 <> na Primary Assembly 36621 na Scaffold_312 unplaced-scaffold na na JAVJNL010000168.1 <> na Primary Assembly 36339 na Scaffold_313 unplaced-scaffold na na JAVJNL010000170.1 <> na Primary Assembly 35417 na Scaffold_314 unplaced-scaffold na na JAVJNL010000173.1 <> na Primary Assembly 33503 na Scaffold_315 unplaced-scaffold na na JAVJNL010000174.1 <> na Primary Assembly 32976 na Scaffold_316 unplaced-scaffold na na JAVJNL010000177.1 <> na Primary Assembly 32626 na Scaffold_317 unplaced-scaffold na na JAVJNL010000179.1 <> na Primary Assembly 31016 na Scaffold_318 unplaced-scaffold na na JAVJNL010000181.1 <> na Primary Assembly 30417 na Scaffold_319 unplaced-scaffold na na JAVJNL010000183.1 <> na Primary Assembly 28642 na Scaffold_320 unplaced-scaffold na na JAVJNL010000185.1 <> na Primary Assembly 27563 na Scaffold_321 unplaced-scaffold na na JAVJNL010000187.1 <> na Primary Assembly 26110 na Scaffold_322 unplaced-scaffold na na JAVJNL010000188.1 <> na Primary Assembly 25915 na Scaffold_323 unplaced-scaffold na na JAVJNL010000190.1 <> na Primary Assembly 25764 na Scaffold_324 unplaced-scaffold na na JAVJNL010000192.1 <> na Primary Assembly 24496 na Scaffold_325 unplaced-scaffold na na JAVJNL010000193.1 <> na Primary Assembly 23983 na Scaffold_326 unplaced-scaffold na na JAVJNL010000195.1 <> na Primary Assembly 21683 na Scaffold_327 unplaced-scaffold na na JAVJNL010000196.1 <> na Primary Assembly 20111 na Scaffold_328 unplaced-scaffold na na JAVJNL010000198.1 <> na Primary Assembly 17542 na Scaffold_329 unplaced-scaffold na na JAVJNL010000199.1 <> na Primary Assembly 16136 na