# Assembly name: mMicPen1.hap2 # Organism name: Microtus pennsylvanicus (meadow vole) # Isolate: mMicPen1 # Sex: male # Taxid: 10058 # BioSample: SAMN39894136 # BioProject: PRJNA1074850 # Submitter: Vertebrate Genomes Project # Date: 2024-03-06 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBANDR01 # Assembly method: Hifiasm + Hi-C phasing v. 0.19.3 + galaxy0; yahs v. 1.2a.2 + galaxy1 # Expected final version: no # Genome coverage: 44.8x # Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2 # GenBank assembly accession: GCA_037039175.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_037039185.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM073145.1 <> na Primary Assembly 222093578 na SUPER_2 assembled-molecule 2 Chromosome CM073146.1 <> na Primary Assembly 154134604 na SUPER_3 assembled-molecule 3 Chromosome CM073147.1 <> na Primary Assembly 145705405 na SUPER_4 assembled-molecule 4 Chromosome CM073148.1 <> na Primary Assembly 145952039 na SUPER_5 assembled-molecule 5 Chromosome CM073149.1 <> na Primary Assembly 138929768 na SUPER_6 assembled-molecule 6 Chromosome CM073150.1 <> na Primary Assembly 132052940 na SUPER_7 assembled-molecule 7 Chromosome CM073151.1 <> na Primary Assembly 125724489 na SUPER_8 assembled-molecule 8 Chromosome CM073152.1 <> na Primary Assembly 118374433 na SUPER_9 assembled-molecule 9 Chromosome CM073153.1 <> na Primary Assembly 111804888 na SUPER_10 assembled-molecule 10 Chromosome CM073154.1 <> na Primary Assembly 114337927 na SUPER_11 assembled-molecule 11 Chromosome CM073155.1 <> na Primary Assembly 105606783 na SUPER_12 assembled-molecule 12 Chromosome CM073156.1 <> na Primary Assembly 98405110 na SUPER_13 assembled-molecule 13 Chromosome CM073157.1 <> na Primary Assembly 85579459 na SUPER_14 assembled-molecule 14 Chromosome CM073158.1 <> na Primary Assembly 75429304 na SUPER_15 assembled-molecule 15 Chromosome CM073159.1 <> na Primary Assembly 74522442 na SUPER_16 assembled-molecule 16 Chromosome CM073160.1 <> na Primary Assembly 49944397 na SUPER_17 assembled-molecule 17 Chromosome CM073161.1 <> na Primary Assembly 46325838 na SUPER_18 assembled-molecule 18 Chromosome CM073162.1 <> na Primary Assembly 43761865 na SUPER_19 assembled-molecule 19 Chromosome CM073163.1 <> na Primary Assembly 41222136 na SUPER_20 assembled-molecule 20 Chromosome CM073164.1 <> na Primary Assembly 39407819 na SUPER_21 assembled-molecule 21 Chromosome CM073165.1 <> na Primary Assembly 37269630 na SUPER_22 assembled-molecule 22 Chromosome CM073166.1 <> na Primary Assembly 33172408 na SUPER_5_unloc_1 unlocalized-scaffold 5 Chromosome JBANDR010000030.1 <> na Primary Assembly 388201 na Scaffold_111 unplaced-scaffold na na JBANDR010000026.1 <> na Primary Assembly 872522 na Scaffold_113 unplaced-scaffold na na JBANDR010000028.1 <> na Primary Assembly 427842 na Scaffold_114 unplaced-scaffold na na JBANDR010000029.1 <> na Primary Assembly 405220 na Scaffold_115 unplaced-scaffold na na JBANDR010000031.1 <> na Primary Assembly 318171 na Scaffold_116 unplaced-scaffold na na JBANDR010000027.1 <> na Primary Assembly 454080 na Scaffold_117 unplaced-scaffold na na JBANDR010000032.1 <> na Primary Assembly 316630 na Scaffold_118 unplaced-scaffold na na JBANDR010000033.1 <> na Primary Assembly 286871 na Scaffold_119 unplaced-scaffold na na JBANDR010000034.1 <> na Primary Assembly 216087 na Scaffold_120 unplaced-scaffold na na JBANDR010000035.1 <> na Primary Assembly 198976 na Scaffold_121 unplaced-scaffold na na JBANDR010000037.1 <> na Primary Assembly 188604 na Scaffold_122 unplaced-scaffold na na JBANDR010000036.1 <> na Primary Assembly 190099 na Scaffold_123 unplaced-scaffold na na JBANDR010000038.1 <> na Primary Assembly 188006 na Scaffold_124 unplaced-scaffold na na JBANDR010000040.1 <> na Primary Assembly 177641 na Scaffold_125 unplaced-scaffold na na JBANDR010000039.1 <> na Primary Assembly 181754 na Scaffold_126 unplaced-scaffold na na JBANDR010000041.1 <> na Primary Assembly 169223 na Scaffold_127 unplaced-scaffold na na JBANDR010000042.1 <> na Primary Assembly 158008 na Scaffold_128 unplaced-scaffold na na JBANDR010000043.1 <> na Primary Assembly 148383 na Scaffold_129 unplaced-scaffold na na JBANDR010000044.1 <> na Primary Assembly 142816 na Scaffold_130 unplaced-scaffold na na JBANDR010000045.1 <> na Primary Assembly 142258 na Scaffold_131 unplaced-scaffold na na JBANDR010000046.1 <> na Primary Assembly 133340 na Scaffold_132 unplaced-scaffold na na JBANDR010000047.1 <> na Primary Assembly 131678 na Scaffold_133 unplaced-scaffold na na JBANDR010000048.1 <> na Primary Assembly 116025 na Scaffold_134 unplaced-scaffold na na JBANDR010000050.1 <> na Primary Assembly 112984 na Scaffold_135 unplaced-scaffold na na JBANDR010000051.1 <> na Primary Assembly 106764 na Scaffold_136 unplaced-scaffold na na JBANDR010000052.1 <> na Primary Assembly 104399 na Scaffold_137 unplaced-scaffold na na JBANDR010000054.1 <> na Primary Assembly 98498 na Scaffold_138 unplaced-scaffold na na JBANDR010000056.1 <> na Primary Assembly 91807 na Scaffold_139 unplaced-scaffold na na JBANDR010000057.1 <> na Primary Assembly 90336 na Scaffold_140 unplaced-scaffold na na JBANDR010000058.1 <> na Primary Assembly 87178 na Scaffold_141 unplaced-scaffold na na JBANDR010000060.1 <> na Primary Assembly 83437 na Scaffold_142 unplaced-scaffold na na JBANDR010000061.1 <> na Primary Assembly 81881 na Scaffold_143 unplaced-scaffold na na JBANDR010000063.1 <> na Primary Assembly 80799 na Scaffold_144 unplaced-scaffold na na JBANDR010000064.1 <> na Primary Assembly 80056 na Scaffold_145 unplaced-scaffold na na JBANDR010000067.1 <> na Primary Assembly 77487 na Scaffold_146 unplaced-scaffold na na JBANDR010000068.1 <> na Primary Assembly 74721 na Scaffold_147 unplaced-scaffold na na JBANDR010000070.1 <> na Primary Assembly 73967 na Scaffold_149 unplaced-scaffold na na JBANDR010000072.1 <> na Primary Assembly 73340 na Scaffold_150 unplaced-scaffold na na JBANDR010000074.1 <> na Primary Assembly 69543 na Scaffold_151 unplaced-scaffold na na JBANDR010000076.1 <> na Primary Assembly 62841 na Scaffold_152 unplaced-scaffold na na JBANDR010000077.1 <> na Primary Assembly 56817 na Scaffold_153 unplaced-scaffold na na JBANDR010000081.1 <> na Primary Assembly 55626 na Scaffold_154 unplaced-scaffold na na JBANDR010000083.1 <> na Primary Assembly 53765 na Scaffold_155 unplaced-scaffold na na JBANDR010000085.1 <> na Primary Assembly 52278 na Scaffold_156 unplaced-scaffold na na JBANDR010000088.1 <> na Primary Assembly 49138 na Scaffold_157 unplaced-scaffold na na JBANDR010000092.1 <> na Primary Assembly 46495 na Scaffold_158 unplaced-scaffold na na JBANDR010000095.1 <> na Primary Assembly 45020 na Scaffold_159 unplaced-scaffold na na JBANDR010000098.1 <> na Primary Assembly 43529 na Scaffold_160 unplaced-scaffold na na JBANDR010000101.1 <> na Primary Assembly 41762 na Scaffold_161 unplaced-scaffold na na JBANDR010000106.1 <> na Primary Assembly 39330 na Scaffold_162 unplaced-scaffold na na JBANDR010000108.1 <> na Primary Assembly 37544 na Scaffold_163 unplaced-scaffold na na JBANDR010000112.1 <> na Primary Assembly 34912 na Scaffold_164 unplaced-scaffold na na JBANDR010000116.1 <> na Primary Assembly 33168 na Scaffold_165 unplaced-scaffold na na JBANDR010000120.1 <> na Primary Assembly 31693 na Scaffold_166 unplaced-scaffold na na JBANDR010000125.1 <> na Primary Assembly 28867 na Scaffold_167 unplaced-scaffold na na JBANDR010000130.1 <> na Primary Assembly 26974 na Scaffold_168 unplaced-scaffold na na JBANDR010000136.1 <> na Primary Assembly 22795 na Scaffold_169 unplaced-scaffold na na JBANDR010000143.1 <> na Primary Assembly 11262 na Scaffold_170 unplaced-scaffold na na JBANDR010000024.1 <> na Primary Assembly 1991128 na Scaffold_171 unplaced-scaffold na na JBANDR010000023.1 <> na Primary Assembly 2061163 na Scaffold_419 unplaced-scaffold na na JBANDR010000049.1 <> na Primary Assembly 113641 na Scaffold_423 unplaced-scaffold na na JBANDR010000053.1 <> na Primary Assembly 98524 na Scaffold_425 unplaced-scaffold na na JBANDR010000055.1 <> na Primary Assembly 93034 na Scaffold_429 unplaced-scaffold na na JBANDR010000059.1 <> na Primary Assembly 84523 na Scaffold_432 unplaced-scaffold na na JBANDR010000062.1 <> na Primary Assembly 81726 na Scaffold_435 unplaced-scaffold na na JBANDR010000065.1 <> na Primary Assembly 79492 na Scaffold_436 unplaced-scaffold na na JBANDR010000066.1 <> na Primary Assembly 78014 na Scaffold_439 unplaced-scaffold na na JBANDR010000069.1 <> na Primary Assembly 74111 na Scaffold_441 unplaced-scaffold na na JBANDR010000071.1 <> na Primary Assembly 73556 na Scaffold_443 unplaced-scaffold na na JBANDR010000073.1 <> na Primary Assembly 71817 na Scaffold_445 unplaced-scaffold na na JBANDR010000075.1 <> na Primary Assembly 69126 na Scaffold_448 unplaced-scaffold na na JBANDR010000078.1 <> na Primary Assembly 56784 na Scaffold_449 unplaced-scaffold na na JBANDR010000079.1 <> na Primary Assembly 56742 na Scaffold_450 unplaced-scaffold na na JBANDR010000080.1 <> na Primary Assembly 56219 na Scaffold_452 unplaced-scaffold na na JBANDR010000082.1 <> na Primary Assembly 55229 na Scaffold_454 unplaced-scaffold na na JBANDR010000084.1 <> na Primary Assembly 52391 na Scaffold_456 unplaced-scaffold na na JBANDR010000086.1 <> na Primary Assembly 52254 na Scaffold_457 unplaced-scaffold na na JBANDR010000087.1 <> na Primary Assembly 50979 na Scaffold_459 unplaced-scaffold na na JBANDR010000089.1 <> na Primary Assembly 48901 na Scaffold_460 unplaced-scaffold na na JBANDR010000090.1 <> na Primary Assembly 48727 na Scaffold_461 unplaced-scaffold na na JBANDR010000091.1 <> na Primary Assembly 48461 na Scaffold_463 unplaced-scaffold na na JBANDR010000093.1 <> na Primary Assembly 45626 na Scaffold_464 unplaced-scaffold na na JBANDR010000094.1 <> na Primary Assembly 45093 na Scaffold_466 unplaced-scaffold na na JBANDR010000096.1 <> na Primary Assembly 44208 na Scaffold_467 unplaced-scaffold na na JBANDR010000097.1 <> na Primary Assembly 43769 na Scaffold_469 unplaced-scaffold na na JBANDR010000099.1 <> na Primary Assembly 43375 na Scaffold_470 unplaced-scaffold na na JBANDR010000100.1 <> na Primary Assembly 42347 na Scaffold_472 unplaced-scaffold na na JBANDR010000102.1 <> na Primary Assembly 40796 na Scaffold_473 unplaced-scaffold na na JBANDR010000103.1 <> na Primary Assembly 40738 na Scaffold_474 unplaced-scaffold na na JBANDR010000104.1 <> na Primary Assembly 40358 na Scaffold_475 unplaced-scaffold na na JBANDR010000105.1 <> na Primary Assembly 39695 na Scaffold_477 unplaced-scaffold na na JBANDR010000107.1 <> na Primary Assembly 37655 na Scaffold_479 unplaced-scaffold na na JBANDR010000109.1 <> na Primary Assembly 35745 na Scaffold_480 unplaced-scaffold na na JBANDR010000110.1 <> na Primary Assembly 35393 na Scaffold_481 unplaced-scaffold na na JBANDR010000111.1 <> na Primary Assembly 35362 na Scaffold_483 unplaced-scaffold na na JBANDR010000113.1 <> na Primary Assembly 34299 na Scaffold_484 unplaced-scaffold na na JBANDR010000114.1 <> na Primary Assembly 34174 na Scaffold_485 unplaced-scaffold na na JBANDR010000115.1 <> na Primary Assembly 33670 na Scaffold_487 unplaced-scaffold na na JBANDR010000117.1 <> na Primary Assembly 32881 na Scaffold_488 unplaced-scaffold na na JBANDR010000118.1 <> na Primary Assembly 32456 na Scaffold_489 unplaced-scaffold na na JBANDR010000119.1 <> na Primary Assembly 32334 na Scaffold_491 unplaced-scaffold na na JBANDR010000121.1 <> na Primary Assembly 31184 na Scaffold_492 unplaced-scaffold na na JBANDR010000122.1 <> na Primary Assembly 30745 na Scaffold_493 unplaced-scaffold na na JBANDR010000123.1 <> na Primary Assembly 29334 na Scaffold_494 unplaced-scaffold na na JBANDR010000124.1 <> na Primary Assembly 29131 na Scaffold_496 unplaced-scaffold na na JBANDR010000126.1 <> na Primary Assembly 28089 na Scaffold_497 unplaced-scaffold na na JBANDR010000127.1 <> na Primary Assembly 28017 na Scaffold_498 unplaced-scaffold na na JBANDR010000128.1 <> na Primary Assembly 28000 na Scaffold_499 unplaced-scaffold na na JBANDR010000129.1 <> na Primary Assembly 27796 na Scaffold_501 unplaced-scaffold na na JBANDR010000131.1 <> na Primary Assembly 24918 na Scaffold_502 unplaced-scaffold na na JBANDR010000132.1 <> na Primary Assembly 24251 na Scaffold_503 unplaced-scaffold na na JBANDR010000133.1 <> na Primary Assembly 23434 na Scaffold_504 unplaced-scaffold na na JBANDR010000134.1 <> na Primary Assembly 23326 na Scaffold_505 unplaced-scaffold na na JBANDR010000135.1 <> na Primary Assembly 23022 na Scaffold_507 unplaced-scaffold na na JBANDR010000137.1 <> na Primary Assembly 21266 na Scaffold_508 unplaced-scaffold na na JBANDR010000138.1 <> na Primary Assembly 20354 na Scaffold_509 unplaced-scaffold na na JBANDR010000139.1 <> na Primary Assembly 18610 na Scaffold_510 unplaced-scaffold na na JBANDR010000140.1 <> na Primary Assembly 18599 na Scaffold_511 unplaced-scaffold na na JBANDR010000141.1 <> na Primary Assembly 14329 na Scaffold_512 unplaced-scaffold na na JBANDR010000142.1 <> na Primary Assembly 14103 na Scaffold_85 unplaced-scaffold na na JBANDR010000025.1 <> na Primary Assembly 1804519 na