# Assembly name: HG00408_mat_hprc_rel2 # Organism name: Homo sapiens (human) # Isolate: HG00408 # Sex: female # Taxid: 9606 # BioSample: SAMN33621943 # BioProject: PRJNA1153498 # Submitter: UCSC Genomics Institute # Date: 2024-09-11 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDVL01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 63x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_041900245.1 # Linked assembly: GCA_041900255.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_041900295.1 Primary Assembly ## GCA_041900325.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG00408#2#h2tg000002l assembled-molecule 2 Chromosome CM085965.1 <> na Primary Assembly 242285778 na HG00408#2#h2tg000008l assembled-molecule 3 Chromosome CM085966.1 <> na Primary Assembly 200638879 na HG00408#2#h2tg000012l assembled-molecule 4 Chromosome CM085967.1 <> na Primary Assembly 191306508 na HG00408#2#h2tg000004l assembled-molecule 5 Chromosome CM085968.1 <> na Primary Assembly 182544958 na HG00408#2#h2tg000001l assembled-molecule 6 Chromosome CM085969.1 <> na Primary Assembly 172019138 na HG00408#2#h2tg000018l assembled-molecule 8 Chromosome CM085970.1 <> na Primary Assembly 145760555 na HG00408#2#h2tg000014l assembled-molecule 9 Chromosome CM085971.1 <> na Primary Assembly 134749224 na HG00408#2#h2tg000017l assembled-molecule 11 Chromosome CM085972.1 <> na Primary Assembly 135344703 na HG00408#2#h2tg000019l assembled-molecule 12 Chromosome CM085973.1 <> na Primary Assembly 134149120 na HG00408#2#h2tg000021l assembled-molecule 16 Chromosome CM085974.1 <> na Primary Assembly 91052676 na HG00408#2#h2tg000009l assembled-molecule 18 Chromosome CM085975.1 <> na Primary Assembly 80347435 na HG00408#2#h2tg000016l assembled-molecule 19 Chromosome CM085976.1 <> na Primary Assembly 62956045 na HG00408#2#h2tg000026l assembled-molecule 20 Chromosome CM085977.1 <> na Primary Assembly 68171241 na HG00408#2#h2tg000005l unplaced-scaffold na na JBHDVL010000003.1 <> na Primary Assembly 56532339 na HG00408#2#h2tg000007l unplaced-scaffold na na JBHDVL010000004.1 <> na Primary Assembly 45677478 na HG00408#2#h2tg000011l unplaced-scaffold na na JBHDVL010000006.1 <> na Primary Assembly 96754720 na HG00408#2#h2tg000015l unplaced-scaffold na na JBHDVL010000008.1 <> na Primary Assembly 39843457 na HG00408#2#h2tg000022l unplaced-scaffold na na JBHDVL010000013.1 <> na Primary Assembly 103282266 na HG00408#2#h2tg000023l unplaced-scaffold na na JBHDVL010000014.1 <> na Primary Assembly 105343498 na HG00408#2#h2tg000024l unplaced-scaffold na na JBHDVL010000015.1 <> na Primary Assembly 52094526 na HG00408#2#h2tg000028l unplaced-scaffold na na JBHDVL010000016.1 <> na Primary Assembly 59152277 na HG00408#2#h2tg000029l unplaced-scaffold na na JBHDVL010000017.1 <> na Primary Assembly 1525291 na HG00408#2#h2tg000030l unplaced-scaffold na na JBHDVL010000018.1 <> na Primary Assembly 179023 na HG00408#2#h2tg000031l unplaced-scaffold na na JBHDVL010000019.1 <> na Primary Assembly 115348 na HG00408#2#h2tg000034l unplaced-scaffold na na JBHDVL010000020.1 <> na Primary Assembly 3027751 na HG00408#2#h2tg000036l unplaced-scaffold na na JBHDVL010000021.1 <> na Primary Assembly 804343 na HG00408#2#h2tg000037l unplaced-scaffold na na JBHDVL010000022.1 <> na Primary Assembly 111157 na HG00408#2#h2tg000040l unplaced-scaffold na na JBHDVL010000023.1 <> na Primary Assembly 135052 na HG00408#2#h2tg000048l unplaced-scaffold na na JBHDVL010000024.1 <> na Primary Assembly 155308 na HG00408#2#h2tg000049l unplaced-scaffold na na JBHDVL010000025.1 <> na Primary Assembly 285616 na HG00408#2#h2tg000051l unplaced-scaffold na na JBHDVL010000026.1 <> na Primary Assembly 60737 na HG00408#2#h2tg000052l unplaced-scaffold na na JBHDVL010000027.1 <> na Primary Assembly 71977 na HG00408#2#h2tg000053l unplaced-scaffold na na JBHDVL010000028.1 <> na Primary Assembly 210547 na HG00408#2#h2tg000058l unplaced-scaffold na na JBHDVL010000029.1 <> na Primary Assembly 128296 na HG00408#2#h2tg000061l unplaced-scaffold na na JBHDVL010000030.1 <> na Primary Assembly 79745 na HG00408#2#h2tg000064l unplaced-scaffold na na JBHDVL010000031.1 <> na Primary Assembly 235284 na HG00408#2#h2tg000068l unplaced-scaffold na na JBHDVL010000032.1 <> na Primary Assembly 51563 na HG00408#2#h2tg000070l unplaced-scaffold na na JBHDVL010000033.1 <> na Primary Assembly 65234 na HG00408#2#h2tg000077l unplaced-scaffold na na JBHDVL010000034.1 <> na Primary Assembly 90385 na HG00408#2#h2tg000081l unplaced-scaffold na na JBHDVL010000035.1 <> na Primary Assembly 50291 na HG00408#2#h2tg000084l unplaced-scaffold na na JBHDVL010000036.1 <> na Primary Assembly 70563 na HG00408#2#h2tg000088l unplaced-scaffold na na JBHDVL010000037.1 <> na Primary Assembly 53380 na HG00408#2#h2tg000003l unplaced-scaffold na na JBHDVL010000038.1 <> na Primary Assembly 104709829 na HG00408#2#h2tg000006l unplaced-scaffold na na JBHDVL010000040.1 <> na Primary Assembly 102120658 na HG00408#2#h2tg000010l unplaced-scaffold na na JBHDVL010000042.1 <> na Primary Assembly 145971191 na HG00408#2#h2tg000013l unplaced-scaffold na na JBHDVL010000044.1 <> na Primary Assembly 135153932 na HG00408#2#h2tg000020l unplaced-scaffold na na JBHDVL010000046.1 <> na Primary Assembly 5634710 na HG00408#2#h2tg000025l unplaced-scaffold na na JBHDVL010000047.1 <> na Primary Assembly 19023494 na HG00408#2#h2tg000027l unplaced-scaffold na na JBHDVL010000049.1 <> na Primary Assembly 97295873 na HG00408#2#h2tg000032l unplaced-scaffold na na JBHDVL010000050.1 <> na Primary Assembly 6147666 na HG00408#2#h2tg000033l unplaced-scaffold na na JBHDVL010000051.1 <> na Primary Assembly 2499083 na HG00408#2#h2tg000035l unplaced-scaffold na na JBHDVL010000052.1 <> na Primary Assembly 3103154 na HG00408#2#h2tg000038l unplaced-scaffold na na JBHDVL010000053.1 <> na Primary Assembly 760791 na HG00408#2#h2tg000041l unplaced-scaffold na na JBHDVL010000054.1 <> na Primary Assembly 205667 na HG00408#2#h2tg000042l unplaced-scaffold na na JBHDVL010000055.1 <> na Primary Assembly 776240 na HG00408#2#h2tg000043l unplaced-scaffold na na JBHDVL010000056.1 <> na Primary Assembly 1944380 na HG00408#2#h2tg000044l unplaced-scaffold na na JBHDVL010000057.1 <> na Primary Assembly 370857 na HG00408#2#h2tg000045l unplaced-scaffold na na JBHDVL010000058.1 <> na Primary Assembly 88960 na HG00408#2#h2tg000050l unplaced-scaffold na na JBHDVL010000059.1 <> na Primary Assembly 77170 na HG00408#2#h2tg000054l unplaced-scaffold na na JBHDVL010000060.1 <> na Primary Assembly 57175 na HG00408#2#h2tg000056l unplaced-scaffold na na JBHDVL010000061.1 <> na Primary Assembly 63569 na HG00408#2#h2tg000057l unplaced-scaffold na na JBHDVL010000062.1 <> na Primary Assembly 57629 na HG00408#2#h2tg000059l unplaced-scaffold na na JBHDVL010000063.1 <> na Primary Assembly 114972 na HG00408#2#h2tg000060l unplaced-scaffold na na JBHDVL010000064.1 <> na Primary Assembly 104099 na HG00408#2#h2tg000063l unplaced-scaffold na na JBHDVL010000065.1 <> na Primary Assembly 155404 na HG00408#2#h2tg000065l unplaced-scaffold na na JBHDVL010000066.1 <> na Primary Assembly 95526 na HG00408#2#h2tg000066l unplaced-scaffold na na JBHDVL010000067.1 <> na Primary Assembly 104922 na HG00408#2#h2tg000071l unplaced-scaffold na na JBHDVL010000068.1 <> na Primary Assembly 52934 na HG00408#2#h2tg000073l unplaced-scaffold na na JBHDVL010000069.1 <> na Primary Assembly 52253 na HG00408#2#h2tg000078l unplaced-scaffold na na JBHDVL010000070.1 <> na Primary Assembly 72503 na HG00408#2#h2tg000086l unplaced-scaffold na na JBHDVL010000071.1 <> na Primary Assembly 68501 na HG00408#2#ptg000001l_rc_rotated unlocalized-scaffold MT Mitochondrion JBHDVL010000072.1 <> na non-nuclear 16569 na