# Assembly name: HG00609_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG00609 # Sex: male # Taxid: 9606 # BioSample: SAMN26237492 # BioProject: PRJNA1156101 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDRY01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 69x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042027095.1 # Linked assembly: GCA_042027545.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042027385.1 Primary Assembly ## GCA_042027415.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG00609#2#h2tg000017l assembled-molecule 1 Chromosome CM086356.1 <> na Primary Assembly 252887223 na HG00609#2#h2tg000001l assembled-molecule 2 Chromosome CM086357.1 <> na Primary Assembly 241456439 na HG00609#2#h2tg000007l assembled-molecule 3 Chromosome CM086358.1 <> na Primary Assembly 201920906 na HG00609#2#h2tg000015l assembled-molecule 4 Chromosome CM086359.1 <> na Primary Assembly 192330830 na HG00609#2#h2tg000004l assembled-molecule 5 Chromosome CM086360.1 <> na Primary Assembly 182691812 na HG00609#2#h2tg000008l assembled-molecule 6 Chromosome CM086361.1 <> na Primary Assembly 170330706 na HG00609#2#h2tg000010l assembled-molecule 7 Chromosome CM086362.1 <> na Primary Assembly 159670526 na HG00609#2#h2tg000005l assembled-molecule 8 Chromosome CM086363.1 <> na Primary Assembly 146552655 na HG00609#2#h2tg000016l assembled-molecule 9 Chromosome CM086364.1 <> na Primary Assembly 131071105 na HG00609#2#h2tg000009l assembled-molecule 10 Chromosome CM086365.1 <> na Primary Assembly 138529381 na HG00609#2#h2tg000003l assembled-molecule 11 Chromosome CM086366.1 <> na Primary Assembly 135525382 na HG00609#2#h2tg000024l assembled-molecule 16 Chromosome CM086367.1 <> na Primary Assembly 87586855 na HG00609#2#h2tg000022l assembled-molecule 17 Chromosome CM086368.1 <> na Primary Assembly 84909087 na HG00609#2#h2tg000027l assembled-molecule 19 Chromosome CM086369.1 <> na Primary Assembly 60848133 na HG00609#2#h2tg000002l unplaced-scaffold na na JBHDRY010000002.1 <> na Primary Assembly 120514771 na HG00609#2#h2tg000011l unplaced-scaffold na na JBHDRY010000008.1 <> na Primary Assembly 99008271 na HG00609#2#h2tg000012l unplaced-scaffold na na JBHDRY010000009.1 <> na Primary Assembly 95974774 na HG00609#2#h2tg000013l unplaced-scaffold na na JBHDRY010000010.1 <> na Primary Assembly 50143798 na HG00609#2#h2tg000018l unplaced-scaffold na na JBHDRY010000012.1 <> na Primary Assembly 116728 na HG00609#2#h2tg000020l unplaced-scaffold na na JBHDRY010000013.1 <> na Primary Assembly 66940226 na HG00609#2#h2tg000023l unplaced-scaffold na na JBHDRY010000014.1 <> na Primary Assembly 78334116 na HG00609#2#h2tg000026l unplaced-scaffold na na JBHDRY010000015.1 <> na Primary Assembly 45430126 na HG00609#2#h2tg000031l unplaced-scaffold na na JBHDRY010000017.1 <> na Primary Assembly 17544172 na HG00609#2#h2tg000039l unplaced-scaffold na na JBHDRY010000018.1 <> na Primary Assembly 145395 na HG00609#2#h2tg000041l unplaced-scaffold na na JBHDRY010000019.1 <> na Primary Assembly 376909 na HG00609#2#h2tg000043l unplaced-scaffold na na JBHDRY010000020.1 <> na Primary Assembly 157369 na HG00609#2#h2tg000048l unplaced-scaffold na na JBHDRY010000021.1 <> na Primary Assembly 1039616 na HG00609#2#h2tg000050l unplaced-scaffold na na JBHDRY010000022.1 <> na Primary Assembly 183382 na HG00609#2#h2tg000051l unplaced-scaffold na na JBHDRY010000023.1 <> na Primary Assembly 220612 na HG00609#2#h2tg000052l unplaced-scaffold na na JBHDRY010000024.1 <> na Primary Assembly 465646 na HG00609#2#h2tg000054l unplaced-scaffold na na JBHDRY010000025.1 <> na Primary Assembly 162737 na HG00609#2#h2tg000055l unplaced-scaffold na na JBHDRY010000026.1 <> na Primary Assembly 61659 na HG00609#2#h2tg000059l unplaced-scaffold na na JBHDRY010000027.1 <> na Primary Assembly 82885 na HG00609#2#h2tg000061l unplaced-scaffold na na JBHDRY010000028.1 <> na Primary Assembly 65742 na HG00609#2#h2tg000070l unplaced-scaffold na na JBHDRY010000029.1 <> na Primary Assembly 52884 na HG00609#2#h2tg000071l unplaced-scaffold na na JBHDRY010000030.1 <> na Primary Assembly 61911 na HG00609#2#h2tg000074l unplaced-scaffold na na JBHDRY010000031.1 <> na Primary Assembly 291296 na HG00609#2#h2tg000076l unplaced-scaffold na na JBHDRY010000032.1 <> na Primary Assembly 62331 na HG00609#2#h2tg000081l unplaced-scaffold na na JBHDRY010000033.1 <> na Primary Assembly 183492 na HG00609#2#h2tg000084l unplaced-scaffold na na JBHDRY010000034.1 <> na Primary Assembly 56511 na HG00609#2#h2tg000085l unplaced-scaffold na na JBHDRY010000035.1 <> na Primary Assembly 50347 na HG00609#2#h2tg000087l unplaced-scaffold na na JBHDRY010000036.1 <> na Primary Assembly 90801 na HG00609#2#h2tg000090l unplaced-scaffold na na JBHDRY010000037.1 <> na Primary Assembly 84618 na HG00609#2#h2tg000096l unplaced-scaffold na na JBHDRY010000038.1 <> na Primary Assembly 63735 na HG00609#2#h2tg000109l unplaced-scaffold na na JBHDRY010000039.1 <> na Primary Assembly 74570 na HG00609#2#h2tg000006l unplaced-scaffold na na JBHDRY010000041.1 <> na Primary Assembly 96593811 na HG00609#2#h2tg000014l unplaced-scaffold na na JBHDRY010000043.1 <> na Primary Assembly 18482286 na HG00609#2#h2tg000019l unplaced-scaffold na na JBHDRY010000046.1 <> na Primary Assembly 3911844 na HG00609#2#h2tg000021l unplaced-scaffold na na JBHDRY010000047.1 <> na Primary Assembly 40366758 na HG00609#2#h2tg000025l unplaced-scaffold na na JBHDRY010000050.1 <> na Primary Assembly 61647457 na HG00609#2#h2tg000028l unplaced-scaffold na na JBHDRY010000051.1 <> na Primary Assembly 2409281 na HG00609#2#h2tg000029l unplaced-scaffold na na JBHDRY010000052.1 <> na Primary Assembly 6403250 na HG00609#2#h2tg000030l unplaced-scaffold na na JBHDRY010000053.1 <> na Primary Assembly 3139902 na HG00609#2#h2tg000032l unplaced-scaffold na na JBHDRY010000054.1 <> na Primary Assembly 85563 na HG00609#2#h2tg000033l unplaced-scaffold na na JBHDRY010000055.1 <> na Primary Assembly 2504337 na HG00609#2#h2tg000034l unplaced-scaffold na na JBHDRY010000056.1 <> na Primary Assembly 3344322 na HG00609#2#h2tg000035l unplaced-scaffold na na JBHDRY010000057.1 <> na Primary Assembly 6102523 na HG00609#2#h2tg000036l unplaced-scaffold na na JBHDRY010000058.1 <> na Primary Assembly 2356483 na HG00609#2#h2tg000037l unplaced-scaffold na na JBHDRY010000059.1 <> na Primary Assembly 11669896 na HG00609#2#h2tg000038l unplaced-scaffold na na JBHDRY010000060.1 <> na Primary Assembly 60400 na HG00609#2#h2tg000040l unplaced-scaffold na na JBHDRY010000061.1 <> na Primary Assembly 122722 na HG00609#2#h2tg000042l unplaced-scaffold na na JBHDRY010000062.1 <> na Primary Assembly 474330 na HG00609#2#h2tg000044l unplaced-scaffold na na JBHDRY010000063.1 <> na Primary Assembly 1871975 na HG00609#2#h2tg000045l unplaced-scaffold na na JBHDRY010000064.1 <> na Primary Assembly 89683 na HG00609#2#h2tg000046l unplaced-scaffold na na JBHDRY010000065.1 <> na Primary Assembly 88083 na HG00609#2#h2tg000047l unplaced-scaffold na na JBHDRY010000066.1 <> na Primary Assembly 163447 na HG00609#2#h2tg000049l unplaced-scaffold na na JBHDRY010000067.1 <> na Primary Assembly 197714 na HG00609#2#h2tg000057l unplaced-scaffold na na JBHDRY010000068.1 <> na Primary Assembly 406499 na HG00609#2#h2tg000058l unplaced-scaffold na na JBHDRY010000069.1 <> na Primary Assembly 101011 na HG00609#2#h2tg000060l unplaced-scaffold na na JBHDRY010000070.1 <> na Primary Assembly 60210 na HG00609#2#h2tg000062l unplaced-scaffold na na JBHDRY010000071.1 <> na Primary Assembly 200493 na HG00609#2#h2tg000063l unplaced-scaffold na na JBHDRY010000072.1 <> na Primary Assembly 95606 na HG00609#2#h2tg000064l unplaced-scaffold na na JBHDRY010000073.1 <> na Primary Assembly 92335 na HG00609#2#h2tg000066l unplaced-scaffold na na JBHDRY010000074.1 <> na Primary Assembly 120001 na HG00609#2#h2tg000067l unplaced-scaffold na na JBHDRY010000075.1 <> na Primary Assembly 89391 na HG00609#2#h2tg000075l unplaced-scaffold na na JBHDRY010000076.1 <> na Primary Assembly 91569 na HG00609#2#h2tg000077l unplaced-scaffold na na JBHDRY010000077.1 <> na Primary Assembly 186030 na HG00609#2#h2tg000078l unplaced-scaffold na na JBHDRY010000078.1 <> na Primary Assembly 58349 na HG00609#2#h2tg000088l unplaced-scaffold na na JBHDRY010000079.1 <> na Primary Assembly 58536 na HG00609#2#h2tg000089l unplaced-scaffold na na JBHDRY010000080.1 <> na Primary Assembly 159959 na HG00609#2#h2tg000099l unplaced-scaffold na na JBHDRY010000081.1 <> na Primary Assembly 90177 na HG00609#2#h2tg000100l unplaced-scaffold na na JBHDRY010000082.1 <> na Primary Assembly 52202 na HG00609#2#ptg000001l_rotated unlocalized-scaffold MT Mitochondrion JBHDRY010000083.1 <> na non-nuclear 16558 na