# Assembly name: HG02004_pat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG02004 # Sex: female # Taxid: 9606 # BioSample: SAMN26237502 # BioProject: PRJNA1156134 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDRT01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 64x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042027455.1 # Linked assembly: GCA_042027105.1 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042027515.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG02004#1#h1tg000004l assembled-molecule 1 Chromosome CM086301.1 <> na Primary Assembly 243814528 na HG02004#1#h1tg000003l assembled-molecule 7 Chromosome CM086302.1 <> na Primary Assembly 161336455 na HG02004#1#h1tg000001l assembled-molecule 8 Chromosome CM086303.1 <> na Primary Assembly 146121470 na HG02004#1#h1tg000015l assembled-molecule 9 Chromosome CM086304.1 <> na Primary Assembly 140660130 na HG02004#1#h1tg000007l assembled-molecule 10 Chromosome CM086305.1 <> na Primary Assembly 134933936 na HG02004#1#h1tg000002l assembled-molecule 12 Chromosome CM086306.1 <> na Primary Assembly 133918786 na HG02004#1#h1tg000029l assembled-molecule 16 Chromosome CM086307.1 <> na Primary Assembly 88775600 na HG02004#1#h1tg000019l assembled-molecule 20 Chromosome CM086308.1 <> na Primary Assembly 67237940 na HG02004#1#h1tg000020l assembled-molecule X Chromosome CM086309.1 <> na Primary Assembly 154786940 na HG02004#1#h1tg000005l unplaced-scaffold na na JBHDRT010000002.1 <> na Primary Assembly 104888986 na HG02004#1#h1tg000006l unplaced-scaffold na na JBHDRT010000003.1 <> na Primary Assembly 59404943 na HG02004#1#h1tg000008l unplaced-scaffold na na JBHDRT010000005.1 <> na Primary Assembly 96475293 na HG02004#1#h1tg000009l unplaced-scaffold na na JBHDRT010000006.1 <> na Primary Assembly 111394486 na HG02004#1#h1tg000012l unplaced-scaffold na na JBHDRT010000007.1 <> na Primary Assembly 141985330 na HG02004#1#h1tg000014l unplaced-scaffold na na JBHDRT010000008.1 <> na Primary Assembly 97010444 na HG02004#1#h1tg000016l unplaced-scaffold na na JBHDRT010000009.1 <> na Primary Assembly 147758852 na HG02004#1#h1tg000021l unplaced-scaffold na na JBHDRT010000012.1 <> na Primary Assembly 192105726 na HG02004#1#h1tg000022l unplaced-scaffold na na JBHDRT010000013.1 <> na Primary Assembly 134249047 na HG02004#1#h1tg000023l unplaced-scaffold na na JBHDRT010000014.1 <> na Primary Assembly 96716399 na HG02004#1#h1tg000024l unplaced-scaffold na na JBHDRT010000015.1 <> na Primary Assembly 61058898 na HG02004#1#h1tg000025l unplaced-scaffold na na JBHDRT010000016.1 <> na Primary Assembly 2278401 na HG02004#1#h1tg000026l unplaced-scaffold na na JBHDRT010000017.1 <> na Primary Assembly 104033800 na HG02004#1#h1tg000027l unplaced-scaffold na na JBHDRT010000018.1 <> na Primary Assembly 24896744 na HG02004#1#h1tg000030l unplaced-scaffold na na JBHDRT010000019.1 <> na Primary Assembly 40077086 na HG02004#1#h1tg000034l unplaced-scaffold na na JBHDRT010000020.1 <> na Primary Assembly 58686 na HG02004#1#h1tg000035l unplaced-scaffold na na JBHDRT010000021.1 <> na Primary Assembly 133398 na HG02004#1#h1tg000041l unplaced-scaffold na na JBHDRT010000022.1 <> na Primary Assembly 685836 na HG02004#1#h1tg000043l unplaced-scaffold na na JBHDRT010000023.1 <> na Primary Assembly 2136180 na HG02004#1#h1tg000046l unplaced-scaffold na na JBHDRT010000024.1 <> na Primary Assembly 1527065 na HG02004#1#h1tg000051l unplaced-scaffold na na JBHDRT010000025.1 <> na Primary Assembly 249736 na HG02004#1#h1tg000055l unplaced-scaffold na na JBHDRT010000026.1 <> na Primary Assembly 77957 na HG02004#1#h1tg000060l unplaced-scaffold na na JBHDRT010000027.1 <> na Primary Assembly 109059 na HG02004#1#h1tg000063l unplaced-scaffold na na JBHDRT010000028.1 <> na Primary Assembly 81474 na HG02004#1#h1tg000068l unplaced-scaffold na na JBHDRT010000029.1 <> na Primary Assembly 93731 na HG02004#1#h1tg000069l unplaced-scaffold na na JBHDRT010000030.1 <> na Primary Assembly 50818 na HG02004#1#h1tg000070l unplaced-scaffold na na JBHDRT010000031.1 <> na Primary Assembly 75911 na HG02004#1#h1tg000071l unplaced-scaffold na na JBHDRT010000032.1 <> na Primary Assembly 123695 na HG02004#1#h1tg000072l unplaced-scaffold na na JBHDRT010000033.1 <> na Primary Assembly 105894 na HG02004#1#h1tg000074l unplaced-scaffold na na JBHDRT010000034.1 <> na Primary Assembly 105562 na HG02004#1#h1tg000075l unplaced-scaffold na na JBHDRT010000035.1 <> na Primary Assembly 51026 na HG02004#1#h1tg000077l unplaced-scaffold na na JBHDRT010000036.1 <> na Primary Assembly 71703 na HG02004#1#h1tg000078l unplaced-scaffold na na JBHDRT010000037.1 <> na Primary Assembly 57302 na HG02004#1#h1tg000079l unplaced-scaffold na na JBHDRT010000038.1 <> na Primary Assembly 168210 na HG02004#1#h1tg000081l unplaced-scaffold na na JBHDRT010000039.1 <> na Primary Assembly 209150 na HG02004#1#h1tg000084l unplaced-scaffold na na JBHDRT010000040.1 <> na Primary Assembly 139786 na HG02004#1#h1tg000090l unplaced-scaffold na na JBHDRT010000041.1 <> na Primary Assembly 60560 na HG02004#1#h1tg000092l unplaced-scaffold na na JBHDRT010000042.1 <> na Primary Assembly 52845 na HG02004#1#h1tg000094l unplaced-scaffold na na JBHDRT010000043.1 <> na Primary Assembly 110399 na HG02004#1#h1tg000105l unplaced-scaffold na na JBHDRT010000044.1 <> na Primary Assembly 139628 na HG02004#1#h1tg000111l unplaced-scaffold na na JBHDRT010000045.1 <> na Primary Assembly 81357 na HG02004#1#h1tg000113l unplaced-scaffold na na JBHDRT010000046.1 <> na Primary Assembly 65744 na HG02004#1#h1tg000136l unplaced-scaffold na na JBHDRT010000047.1 <> na Primary Assembly 54675 na HG02004#1#h1tg000147l unplaced-scaffold na na JBHDRT010000048.1 <> na Primary Assembly 54427 na HG02004#1#h1tg000010l unplaced-scaffold na na JBHDRT010000052.1 <> na Primary Assembly 3244874 na HG02004#1#h1tg000011l unplaced-scaffold na na JBHDRT010000053.1 <> na Primary Assembly 46102297 na HG02004#1#h1tg000013l unplaced-scaffold na na JBHDRT010000054.1 <> na Primary Assembly 89707142 na HG02004#1#h1tg000017l unplaced-scaffold na na JBHDRT010000056.1 <> na Primary Assembly 17833316 na HG02004#1#h1tg000018l unplaced-scaffold na na JBHDRT010000057.1 <> na Primary Assembly 58787740 na HG02004#1#h1tg000028l unplaced-scaffold na na JBHDRT010000058.1 <> na Primary Assembly 40462512 na HG02004#1#h1tg000031l unplaced-scaffold na na JBHDRT010000060.1 <> na Primary Assembly 3063015 na HG02004#1#h1tg000032l unplaced-scaffold na na JBHDRT010000061.1 <> na Primary Assembly 62108454 na HG02004#1#h1tg000033l unplaced-scaffold na na JBHDRT010000062.1 <> na Primary Assembly 3543586 na HG02004#1#h1tg000036l unplaced-scaffold na na JBHDRT010000063.1 <> na Primary Assembly 4586993 na HG02004#1#h1tg000038l unplaced-scaffold na na JBHDRT010000064.1 <> na Primary Assembly 2656992 na HG02004#1#h1tg000040l unplaced-scaffold na na JBHDRT010000065.1 <> na Primary Assembly 2490927 na HG02004#1#h1tg000044l unplaced-scaffold na na JBHDRT010000066.1 <> na Primary Assembly 168047 na HG02004#1#h1tg000047l unplaced-scaffold na na JBHDRT010000067.1 <> na Primary Assembly 63818 na HG02004#1#h1tg000049l unplaced-scaffold na na JBHDRT010000068.1 <> na Primary Assembly 137939 na HG02004#1#h1tg000053l unplaced-scaffold na na JBHDRT010000069.1 <> na Primary Assembly 818363 na HG02004#1#h1tg000056l unplaced-scaffold na na JBHDRT010000070.1 <> na Primary Assembly 75614 na HG02004#1#h1tg000058l unplaced-scaffold na na JBHDRT010000071.1 <> na Primary Assembly 243597 na HG02004#1#h1tg000059l unplaced-scaffold na na JBHDRT010000072.1 <> na Primary Assembly 136458 na HG02004#1#h1tg000062l unplaced-scaffold na na JBHDRT010000073.1 <> na Primary Assembly 271044 na HG02004#1#h1tg000064l unplaced-scaffold na na JBHDRT010000074.1 <> na Primary Assembly 127672 na HG02004#1#h1tg000065l unplaced-scaffold na na JBHDRT010000075.1 <> na Primary Assembly 52899 na HG02004#1#h1tg000066l unplaced-scaffold na na JBHDRT010000076.1 <> na Primary Assembly 114340 na HG02004#1#h1tg000067l unplaced-scaffold na na JBHDRT010000077.1 <> na Primary Assembly 87436 na HG02004#1#h1tg000073l unplaced-scaffold na na JBHDRT010000078.1 <> na Primary Assembly 86298 na HG02004#1#h1tg000082l unplaced-scaffold na na JBHDRT010000079.1 <> na Primary Assembly 54270 na HG02004#1#h1tg000085l unplaced-scaffold na na JBHDRT010000080.1 <> na Primary Assembly 55173 na HG02004#1#h1tg000086l unplaced-scaffold na na JBHDRT010000081.1 <> na Primary Assembly 99664 na HG02004#1#h1tg000089l unplaced-scaffold na na JBHDRT010000082.1 <> na Primary Assembly 110627 na HG02004#1#h1tg000091l unplaced-scaffold na na JBHDRT010000083.1 <> na Primary Assembly 63433 na HG02004#1#h1tg000093l unplaced-scaffold na na JBHDRT010000084.1 <> na Primary Assembly 80190 na HG02004#1#h1tg000097l unplaced-scaffold na na JBHDRT010000085.1 <> na Primary Assembly 57674 na HG02004#1#h1tg000099l unplaced-scaffold na na JBHDRT010000086.1 <> na Primary Assembly 69111 na HG02004#1#h1tg000101l unplaced-scaffold na na JBHDRT010000087.1 <> na Primary Assembly 56047 na HG02004#1#h1tg000125l unplaced-scaffold na na JBHDRT010000088.1 <> na Primary Assembly 51910 na