# Assembly name: HG01993_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG01993 # Sex: female # Taxid: 9606 # BioSample: SAMN26237501 # BioProject: PRJNA1156109 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDSM01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 72x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042027655.1 # Linked assembly: GCA_042028705.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042027845.1 Primary Assembly ## GCA_042027885.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG01993#2#h2tg000015l assembled-molecule 3 Chromosome CM086534.1 <> na Primary Assembly 199848694 na HG01993#2#h2tg000012l assembled-molecule 4 Chromosome CM086535.1 <> na Primary Assembly 192633665 na HG01993#2#h2tg000003l assembled-molecule 7 Chromosome CM086536.1 <> na Primary Assembly 161318120 na HG01993#2#h2tg000004l assembled-molecule 9 Chromosome CM086537.1 <> na Primary Assembly 130879832 na HG01993#2#h2tg000013l assembled-molecule 10 Chromosome CM086538.1 <> na Primary Assembly 136718071 na HG01993#2#h2tg000002l assembled-molecule 11 Chromosome CM086539.1 <> na Primary Assembly 137297449 na HG01993#2#h2tg000001l assembled-molecule 12 Chromosome CM086540.1 <> na Primary Assembly 133388926 na HG01993#2#h2tg000019l assembled-molecule 16 Chromosome CM086541.1 <> na Primary Assembly 84961448 na HG01993#2#h2tg000029l assembled-molecule 18 Chromosome CM086542.1 <> na Primary Assembly 81949282 na HG01993#2#h2tg000005l assembled-molecule 19 Chromosome CM086543.1 <> na Primary Assembly 61954750 na HG01993#2#h2tg000016l assembled-molecule X Chromosome CM086544.1 <> na Primary Assembly 154873809 na HG01993#2#h2tg000006l unplaced-scaffold na na JBHDSM010000004.1 <> na Primary Assembly 242561356 na HG01993#2#h2tg000007l unplaced-scaffold na na JBHDSM010000005.1 <> na Primary Assembly 71822713 na HG01993#2#h2tg000008l unplaced-scaffold na na JBHDSM010000006.1 <> na Primary Assembly 110910560 na HG01993#2#h2tg000010l unplaced-scaffold na na JBHDSM010000007.1 <> na Primary Assembly 110225330 na HG01993#2#h2tg000011l unplaced-scaffold na na JBHDSM010000008.1 <> na Primary Assembly 46264895 na HG01993#2#h2tg000017l unplaced-scaffold na na JBHDSM010000013.1 <> na Primary Assembly 41011217 na HG01993#2#h2tg000020l unplaced-scaffold na na JBHDSM010000014.1 <> na Primary Assembly 145351357 na HG01993#2#h2tg000021l unplaced-scaffold na na JBHDSM010000015.1 <> na Primary Assembly 102860423 na HG01993#2#h2tg000022l unplaced-scaffold na na JBHDSM010000016.1 <> na Primary Assembly 96257238 na HG01993#2#h2tg000023l unplaced-scaffold na na JBHDSM010000017.1 <> na Primary Assembly 25342861 na HG01993#2#h2tg000024l unplaced-scaffold na na JBHDSM010000018.1 <> na Primary Assembly 48711167 na HG01993#2#h2tg000026l unplaced-scaffold na na JBHDSM010000019.1 <> na Primary Assembly 69392269 na HG01993#2#h2tg000027l unplaced-scaffold na na JBHDSM010000020.1 <> na Primary Assembly 23616730 na HG01993#2#h2tg000030l unplaced-scaffold na na JBHDSM010000021.1 <> na Primary Assembly 10111152 na HG01993#2#h2tg000031l unplaced-scaffold na na JBHDSM010000022.1 <> na Primary Assembly 65497987 na HG01993#2#h2tg000034l unplaced-scaffold na na JBHDSM010000023.1 <> na Primary Assembly 9583264 na HG01993#2#h2tg000044l unplaced-scaffold na na JBHDSM010000024.1 <> na Primary Assembly 1851034 na HG01993#2#h2tg000045l unplaced-scaffold na na JBHDSM010000025.1 <> na Primary Assembly 1019911 na HG01993#2#h2tg000046l unplaced-scaffold na na JBHDSM010000026.1 <> na Primary Assembly 744210 na HG01993#2#h2tg000047l unplaced-scaffold na na JBHDSM010000027.1 <> na Primary Assembly 340826 na HG01993#2#h2tg000048l unplaced-scaffold na na JBHDSM010000028.1 <> na Primary Assembly 417019 na HG01993#2#h2tg000051l unplaced-scaffold na na JBHDSM010000029.1 <> na Primary Assembly 129887 na HG01993#2#h2tg000052l unplaced-scaffold na na JBHDSM010000030.1 <> na Primary Assembly 407908 na HG01993#2#h2tg000054l unplaced-scaffold na na JBHDSM010000031.1 <> na Primary Assembly 113648 na HG01993#2#h2tg000056l unplaced-scaffold na na JBHDSM010000032.1 <> na Primary Assembly 136607 na HG01993#2#h2tg000058l unplaced-scaffold na na JBHDSM010000033.1 <> na Primary Assembly 204330 na HG01993#2#h2tg000063l unplaced-scaffold na na JBHDSM010000034.1 <> na Primary Assembly 258983 na HG01993#2#h2tg000064l unplaced-scaffold na na JBHDSM010000035.1 <> na Primary Assembly 65026 na HG01993#2#h2tg000065l unplaced-scaffold na na JBHDSM010000036.1 <> na Primary Assembly 87425 na HG01993#2#h2tg000070l unplaced-scaffold na na JBHDSM010000037.1 <> na Primary Assembly 114849 na HG01993#2#h2tg000074l unplaced-scaffold na na JBHDSM010000038.1 <> na Primary Assembly 224554 na HG01993#2#h2tg000076l unplaced-scaffold na na JBHDSM010000039.1 <> na Primary Assembly 63705 na HG01993#2#h2tg000078l unplaced-scaffold na na JBHDSM010000040.1 <> na Primary Assembly 54790 na HG01993#2#h2tg000079l unplaced-scaffold na na JBHDSM010000041.1 <> na Primary Assembly 71737 na HG01993#2#h2tg000080l unplaced-scaffold na na JBHDSM010000042.1 <> na Primary Assembly 69478 na HG01993#2#h2tg000083l unplaced-scaffold na na JBHDSM010000043.1 <> na Primary Assembly 263046 na HG01993#2#h2tg000084l unplaced-scaffold na na JBHDSM010000044.1 <> na Primary Assembly 100213 na HG01993#2#h2tg000085l unplaced-scaffold na na JBHDSM010000045.1 <> na Primary Assembly 52798 na HG01993#2#h2tg000086l unplaced-scaffold na na JBHDSM010000046.1 <> na Primary Assembly 119283 na HG01993#2#h2tg000089l unplaced-scaffold na na JBHDSM010000047.1 <> na Primary Assembly 258966 na HG01993#2#h2tg000094l unplaced-scaffold na na JBHDSM010000048.1 <> na Primary Assembly 104021 na HG01993#2#h2tg000099l unplaced-scaffold na na JBHDSM010000049.1 <> na Primary Assembly 244853 na HG01993#2#h2tg000100l unplaced-scaffold na na JBHDSM010000050.1 <> na Primary Assembly 56537 na HG01993#2#h2tg000102l unplaced-scaffold na na JBHDSM010000051.1 <> na Primary Assembly 58309 na HG01993#2#h2tg000104l unplaced-scaffold na na JBHDSM010000052.1 <> na Primary Assembly 52174 na HG01993#2#h2tg000106l unplaced-scaffold na na JBHDSM010000053.1 <> na Primary Assembly 85907 na HG01993#2#h2tg000107l unplaced-scaffold na na JBHDSM010000054.1 <> na Primary Assembly 203228 na HG01993#2#h2tg000009l unplaced-scaffold na na JBHDSM010000057.1 <> na Primary Assembly 111498894 na HG01993#2#h2tg000014l unplaced-scaffold na na JBHDSM010000058.1 <> na Primary Assembly 133504051 na HG01993#2#h2tg000018l unplaced-scaffold na na JBHDSM010000059.1 <> na Primary Assembly 2411707 na HG01993#2#h2tg000025l unplaced-scaffold na na JBHDSM010000061.1 <> na Primary Assembly 337340 na HG01993#2#h2tg000028l unplaced-scaffold na na JBHDSM010000062.1 <> na Primary Assembly 60815572 na HG01993#2#h2tg000032l unplaced-scaffold na na JBHDSM010000064.1 <> na Primary Assembly 2693384 na HG01993#2#h2tg000033l unplaced-scaffold na na JBHDSM010000065.1 <> na Primary Assembly 197909 na HG01993#2#h2tg000035l unplaced-scaffold na na JBHDSM010000066.1 <> na Primary Assembly 5588581 na HG01993#2#h2tg000036l unplaced-scaffold na na JBHDSM010000067.1 <> na Primary Assembly 1504673 na HG01993#2#h2tg000037l unplaced-scaffold na na JBHDSM010000068.1 <> na Primary Assembly 332924 na HG01993#2#h2tg000038l unplaced-scaffold na na JBHDSM010000069.1 <> na Primary Assembly 454083 na HG01993#2#h2tg000039l unplaced-scaffold na na JBHDSM010000070.1 <> na Primary Assembly 4509961 na HG01993#2#h2tg000040l unplaced-scaffold na na JBHDSM010000071.1 <> na Primary Assembly 83756 na HG01993#2#h2tg000041l unplaced-scaffold na na JBHDSM010000072.1 <> na Primary Assembly 310351 na HG01993#2#h2tg000043l unplaced-scaffold na na JBHDSM010000073.1 <> na Primary Assembly 352282 na HG01993#2#h2tg000049l unplaced-scaffold na na JBHDSM010000074.1 <> na Primary Assembly 739191 na HG01993#2#h2tg000050l unplaced-scaffold na na JBHDSM010000075.1 <> na Primary Assembly 515468 na HG01993#2#h2tg000057l unplaced-scaffold na na JBHDSM010000076.1 <> na Primary Assembly 151123 na HG01993#2#h2tg000059l unplaced-scaffold na na JBHDSM010000077.1 <> na Primary Assembly 256500 na HG01993#2#h2tg000060l unplaced-scaffold na na JBHDSM010000078.1 <> na Primary Assembly 188089 na HG01993#2#h2tg000061l unplaced-scaffold na na JBHDSM010000079.1 <> na Primary Assembly 797935 na HG01993#2#h2tg000066l unplaced-scaffold na na JBHDSM010000080.1 <> na Primary Assembly 217691 na HG01993#2#h2tg000069l unplaced-scaffold na na JBHDSM010000081.1 <> na Primary Assembly 394403 na HG01993#2#h2tg000071l unplaced-scaffold na na JBHDSM010000082.1 <> na Primary Assembly 190437 na HG01993#2#h2tg000072l unplaced-scaffold na na JBHDSM010000083.1 <> na Primary Assembly 63104 na HG01993#2#h2tg000075l unplaced-scaffold na na JBHDSM010000084.1 <> na Primary Assembly 238075 na HG01993#2#h2tg000077l unplaced-scaffold na na JBHDSM010000085.1 <> na Primary Assembly 140349 na HG01993#2#h2tg000081l unplaced-scaffold na na JBHDSM010000086.1 <> na Primary Assembly 194747 na HG01993#2#h2tg000091l unplaced-scaffold na na JBHDSM010000087.1 <> na Primary Assembly 187832 na HG01993#2#h2tg000092l unplaced-scaffold na na JBHDSM010000088.1 <> na Primary Assembly 55246 na HG01993#2#h2tg000095l unplaced-scaffold na na JBHDSM010000089.1 <> na Primary Assembly 103944 na HG01993#2#h2tg000096l unplaced-scaffold na na JBHDSM010000090.1 <> na Primary Assembly 150302 na HG01993#2#h2tg000097l unplaced-scaffold na na JBHDSM010000091.1 <> na Primary Assembly 59167 na HG01993#2#h2tg000098l unplaced-scaffold na na JBHDSM010000092.1 <> na Primary Assembly 134719 na HG01993#2#h2tg000101l unplaced-scaffold na na JBHDSM010000093.1 <> na Primary Assembly 59058 na HG01993#2#h2tg000111l unplaced-scaffold na na JBHDSM010000094.1 <> na Primary Assembly 249092 na HG01993#2#ptg000001l_rotated unlocalized-scaffold MT Mitochondrion JBHDSM010000095.1 <> na non-nuclear 16562 na