# Assembly name: HG01346_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG01346 # Sex: female # Taxid: 9606 # BioSample: SAMN26267379 # BioProject: PRJNA1156112 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDSS01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 68x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042028165.1 # Linked assembly: GCA_042028795.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042028385.1 Primary Assembly ## GCA_042028505.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG01346#2#h2tg000003l assembled-molecule 3 Chromosome CM086598.1 <> na Primary Assembly 199668628 na HG01346#2#h2tg000011l assembled-molecule 4 Chromosome CM086599.1 <> na Primary Assembly 193604881 na HG01346#2#h2tg000010l assembled-molecule 5 Chromosome CM086600.1 <> na Primary Assembly 182478800 na HG01346#2#h2tg000019l assembled-molecule 8 Chromosome CM086601.1 <> na Primary Assembly 145968628 na HG01346#2#h2tg000012l assembled-molecule 9 Chromosome CM086602.1 <> na Primary Assembly 136040464 na HG01346#2#h2tg000008l assembled-molecule 11 Chromosome CM086603.1 <> na Primary Assembly 136112658 na HG01346#2#h2tg000018l assembled-molecule 12 Chromosome CM086604.1 <> na Primary Assembly 133337808 na HG01346#2#h2tg000005l assembled-molecule 16 Chromosome CM086605.1 <> na Primary Assembly 92782696 na HG01346#2#h2tg000029l assembled-molecule 19 Chromosome CM086606.1 <> na Primary Assembly 62512286 na HG01346#2#h2tg000027l assembled-molecule 20 Chromosome CM086607.1 <> na Primary Assembly 66579227 na HG01346#2#h2tg000030l assembled-molecule 22 Chromosome CM086608.1 <> na Primary Assembly 49763577 na HG01346#2#h2tg000014l assembled-molecule X Chromosome CM086609.1 <> na Primary Assembly 155047793 na HG01346#2#h2tg000001l unplaced-scaffold na na JBHDSS010000001.1 <> na Primary Assembly 107606467 na HG01346#2#h2tg000002l unplaced-scaffold na na JBHDSS010000002.1 <> na Primary Assembly 172789501 na HG01346#2#h2tg000004l unplaced-scaffold na na JBHDSS010000004.1 <> na Primary Assembly 132281992 na HG01346#2#h2tg000007l unplaced-scaffold na na JBHDSS010000005.1 <> na Primary Assembly 98014387 na HG01346#2#h2tg000013l unplaced-scaffold na na JBHDSS010000009.1 <> na Primary Assembly 39560537 na HG01346#2#h2tg000015l unplaced-scaffold na na JBHDSS010000011.1 <> na Primary Assembly 108149983 na HG01346#2#h2tg000016l unplaced-scaffold na na JBHDSS010000012.1 <> na Primary Assembly 104951497 na HG01346#2#h2tg000017l unplaced-scaffold na na JBHDSS010000013.1 <> na Primary Assembly 134226198 na HG01346#2#h2tg000020l unplaced-scaffold na na JBHDSS010000015.1 <> na Primary Assembly 57225374 na HG01346#2#h2tg000021l unplaced-scaffold na na JBHDSS010000016.1 <> na Primary Assembly 16721232 na HG01346#2#h2tg000022l unplaced-scaffold na na JBHDSS010000017.1 <> na Primary Assembly 24935118 na HG01346#2#h2tg000023l unplaced-scaffold na na JBHDSS010000018.1 <> na Primary Assembly 61026753 na HG01346#2#h2tg000025l unplaced-scaffold na na JBHDSS010000019.1 <> na Primary Assembly 54024793 na HG01346#2#h2tg000032l unplaced-scaffold na na JBHDSS010000022.1 <> na Primary Assembly 634601 na HG01346#2#h2tg000033l unplaced-scaffold na na JBHDSS010000023.1 <> na Primary Assembly 193870 na HG01346#2#h2tg000036l unplaced-scaffold na na JBHDSS010000024.1 <> na Primary Assembly 3754404 na HG01346#2#h2tg000037l unplaced-scaffold na na JBHDSS010000025.1 <> na Primary Assembly 87399 na HG01346#2#h2tg000040l unplaced-scaffold na na JBHDSS010000026.1 <> na Primary Assembly 52666 na HG01346#2#h2tg000041l unplaced-scaffold na na JBHDSS010000027.1 <> na Primary Assembly 1678329 na HG01346#2#h2tg000042l unplaced-scaffold na na JBHDSS010000028.1 <> na Primary Assembly 143145 na HG01346#2#h2tg000044l unplaced-scaffold na na JBHDSS010000029.1 <> na Primary Assembly 421788 na HG01346#2#h2tg000048l unplaced-scaffold na na JBHDSS010000030.1 <> na Primary Assembly 634512 na HG01346#2#h2tg000054l unplaced-scaffold na na JBHDSS010000031.1 <> na Primary Assembly 68169 na HG01346#2#h2tg000059l unplaced-scaffold na na JBHDSS010000032.1 <> na Primary Assembly 239424 na HG01346#2#h2tg000065l unplaced-scaffold na na JBHDSS010000033.1 <> na Primary Assembly 266538 na HG01346#2#h2tg000067l unplaced-scaffold na na JBHDSS010000034.1 <> na Primary Assembly 53283 na HG01346#2#h2tg000073l unplaced-scaffold na na JBHDSS010000035.1 <> na Primary Assembly 71916 na HG01346#2#h2tg000075l unplaced-scaffold na na JBHDSS010000036.1 <> na Primary Assembly 95856 na HG01346#2#h2tg000078l unplaced-scaffold na na JBHDSS010000037.1 <> na Primary Assembly 152476 na HG01346#2#h2tg000079l unplaced-scaffold na na JBHDSS010000038.1 <> na Primary Assembly 85601 na HG01346#2#h2tg000080l unplaced-scaffold na na JBHDSS010000039.1 <> na Primary Assembly 78652 na HG01346#2#h2tg000085l unplaced-scaffold na na JBHDSS010000040.1 <> na Primary Assembly 61711 na HG01346#2#h2tg000086l unplaced-scaffold na na JBHDSS010000041.1 <> na Primary Assembly 52778 na HG01346#2#h2tg000087l unplaced-scaffold na na JBHDSS010000042.1 <> na Primary Assembly 95370 na HG01346#2#h2tg000092l unplaced-scaffold na na JBHDSS010000043.1 <> na Primary Assembly 63478 na HG01346#2#h2tg000101l unplaced-scaffold na na JBHDSS010000044.1 <> na Primary Assembly 51228 na HG01346#2#h2tg000006l unplaced-scaffold na na JBHDSS010000046.1 <> na Primary Assembly 92271919 na HG01346#2#h2tg000009l unplaced-scaffold na na JBHDSS010000047.1 <> na Primary Assembly 112325684 na HG01346#2#h2tg000024l unplaced-scaffold na na JBHDSS010000050.1 <> na Primary Assembly 109925909 na HG01346#2#h2tg000026l unplaced-scaffold na na JBHDSS010000051.1 <> na Primary Assembly 25342023 na HG01346#2#h2tg000028l unplaced-scaffold na na JBHDSS010000053.1 <> na Primary Assembly 4460313 na HG01346#2#h2tg000031l unplaced-scaffold na na JBHDSS010000054.1 <> na Primary Assembly 4496825 na HG01346#2#h2tg000034l unplaced-scaffold na na JBHDSS010000055.1 <> na Primary Assembly 2937351 na HG01346#2#h2tg000035l unplaced-scaffold na na JBHDSS010000056.1 <> na Primary Assembly 3570959 na HG01346#2#h2tg000038l unplaced-scaffold na na JBHDSS010000057.1 <> na Primary Assembly 85910 na HG01346#2#h2tg000039l unplaced-scaffold na na JBHDSS010000058.1 <> na Primary Assembly 59892 na HG01346#2#h2tg000043l unplaced-scaffold na na JBHDSS010000059.1 <> na Primary Assembly 186522 na HG01346#2#h2tg000045l unplaced-scaffold na na JBHDSS010000060.1 <> na Primary Assembly 416194 na HG01346#2#h2tg000046l unplaced-scaffold na na JBHDSS010000061.1 <> na Primary Assembly 107303 na HG01346#2#h2tg000047l unplaced-scaffold na na JBHDSS010000062.1 <> na Primary Assembly 638781 na HG01346#2#h2tg000049l unplaced-scaffold na na JBHDSS010000063.1 <> na Primary Assembly 183049 na HG01346#2#h2tg000050l unplaced-scaffold na na JBHDSS010000064.1 <> na Primary Assembly 340994 na HG01346#2#h2tg000051l unplaced-scaffold na na JBHDSS010000065.1 <> na Primary Assembly 94722 na HG01346#2#h2tg000052l unplaced-scaffold na na JBHDSS010000066.1 <> na Primary Assembly 150607 na HG01346#2#h2tg000055l unplaced-scaffold na na JBHDSS010000067.1 <> na Primary Assembly 361921 na HG01346#2#h2tg000056l unplaced-scaffold na na JBHDSS010000068.1 <> na Primary Assembly 293700 na HG01346#2#h2tg000057l unplaced-scaffold na na JBHDSS010000069.1 <> na Primary Assembly 233493 na HG01346#2#h2tg000063l unplaced-scaffold na na JBHDSS010000070.1 <> na Primary Assembly 60853 na HG01346#2#h2tg000068l unplaced-scaffold na na JBHDSS010000071.1 <> na Primary Assembly 62081 na HG01346#2#h2tg000069l unplaced-scaffold na na JBHDSS010000072.1 <> na Primary Assembly 163073 na HG01346#2#h2tg000070l unplaced-scaffold na na JBHDSS010000073.1 <> na Primary Assembly 51446 na HG01346#2#h2tg000071l unplaced-scaffold na na JBHDSS010000074.1 <> na Primary Assembly 65293 na HG01346#2#h2tg000072l unplaced-scaffold na na JBHDSS010000075.1 <> na Primary Assembly 111168 na HG01346#2#h2tg000076l unplaced-scaffold na na JBHDSS010000076.1 <> na Primary Assembly 96194 na HG01346#2#h2tg000081l unplaced-scaffold na na JBHDSS010000077.1 <> na Primary Assembly 62683 na HG01346#2#h2tg000091l unplaced-scaffold na na JBHDSS010000078.1 <> na Primary Assembly 94980 na HG01346#2#h2tg000098l unplaced-scaffold na na JBHDSS010000079.1 <> na Primary Assembly 52844 na HG01346#2#h2tg000102l unplaced-scaffold na na JBHDSS010000080.1 <> na Primary Assembly 112815 na HG01346#2#ptg000001l_rotated unlocalized-scaffold MT Mitochondrion JBHDSS010000081.1 <> na non-nuclear 16565 na