# Assembly name: HG04204_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG04204 # Sex: male # Taxid: 9606 # BioSample: SAMN26267390 # BioProject: PRJNA1157249 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIGZ01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 63x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042036425.1 # Linked assembly: GCA_042036795.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042036455.1 Primary Assembly ## GCA_042036465.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG04204#2#h2tg000004l assembled-molecule 2 Chromosome CM088467.1 <> na Primary Assembly 242473346 na HG04204#2#h2tg000007l assembled-molecule 5 Chromosome CM088468.1 <> na Primary Assembly 184035679 na HG04204#2#h2tg000030l assembled-molecule 7 Chromosome CM088469.1 <> na Primary Assembly 162100358 na HG04204#2#h2tg000003l assembled-molecule 8 Chromosome CM088470.1 <> na Primary Assembly 147032488 na HG04204#2#h2tg000024l assembled-molecule 9 Chromosome CM088471.1 <> na Primary Assembly 130171955 na HG04204#2#h2tg000016l assembled-molecule 10 Chromosome CM088472.1 <> na Primary Assembly 135703624 na HG04204#2#h2tg000011l assembled-molecule 12 Chromosome CM088473.1 <> na Primary Assembly 134670375 na HG04204#2#h2tg000029l assembled-molecule 16 Chromosome CM088474.1 <> na Primary Assembly 91866025 na HG04204#2#h2tg000013l assembled-molecule 19 Chromosome CM088475.1 <> na Primary Assembly 60194284 na HG04204#2#h2tg000021l assembled-molecule 20 Chromosome CM088476.1 <> na Primary Assembly 65689154 na HG04204#2#h2tg000002l unplaced-scaffold na na JBHIGZ010000001.1 <> na Primary Assembly 64962054 na HG04204#2#h2tg000005l unplaced-scaffold na na JBHIGZ010000003.1 <> na Primary Assembly 40151402 na HG04204#2#h2tg000008l unplaced-scaffold na na JBHIGZ010000005.1 <> na Primary Assembly 98210932 na HG04204#2#h2tg000009l unplaced-scaffold na na JBHIGZ010000006.1 <> na Primary Assembly 107419106 na HG04204#2#h2tg000010l unplaced-scaffold na na JBHIGZ010000007.1 <> na Primary Assembly 20416226 na HG04204#2#h2tg000012l unplaced-scaffold na na JBHIGZ010000009.1 <> na Primary Assembly 90796284 na HG04204#2#h2tg000014l unplaced-scaffold na na JBHIGZ010000010.1 <> na Primary Assembly 141366677 na HG04204#2#h2tg000015l unplaced-scaffold na na JBHIGZ010000011.1 <> na Primary Assembly 48538665 na HG04204#2#h2tg000017l unplaced-scaffold na na JBHIGZ010000012.1 <> na Primary Assembly 111821596 na HG04204#2#h2tg000019l unplaced-scaffold na na JBHIGZ010000013.1 <> na Primary Assembly 102792675 na HG04204#2#h2tg000020l unplaced-scaffold na na JBHIGZ010000014.1 <> na Primary Assembly 60843599 na HG04204#2#h2tg000023l unplaced-scaffold na na JBHIGZ010000015.1 <> na Primary Assembly 102164499 na HG04204#2#h2tg000025l unplaced-scaffold na na JBHIGZ010000017.1 <> na Primary Assembly 2058675 na HG04204#2#h2tg000026l unplaced-scaffold na na JBHIGZ010000018.1 <> na Primary Assembly 51596254 na HG04204#2#h2tg000031l unplaced-scaffold na na JBHIGZ010000020.1 <> na Primary Assembly 49124407 na HG04204#2#h2tg000035l unplaced-scaffold na na JBHIGZ010000021.1 <> na Primary Assembly 1877302 na HG04204#2#h2tg000036l unplaced-scaffold na na JBHIGZ010000022.1 <> na Primary Assembly 64817 na HG04204#2#h2tg000039l unplaced-scaffold na na JBHIGZ010000023.1 <> na Primary Assembly 220671 na HG04204#2#h2tg000047l unplaced-scaffold na na JBHIGZ010000024.1 <> na Primary Assembly 101194 na HG04204#2#h2tg000049l unplaced-scaffold na na JBHIGZ010000025.1 <> na Primary Assembly 93664 na HG04204#2#h2tg000051l unplaced-scaffold na na JBHIGZ010000026.1 <> na Primary Assembly 181398 na HG04204#2#h2tg000056l unplaced-scaffold na na JBHIGZ010000027.1 <> na Primary Assembly 2130949 na HG04204#2#h2tg000057l unplaced-scaffold na na JBHIGZ010000028.1 <> na Primary Assembly 161423 na HG04204#2#h2tg000060l unplaced-scaffold na na JBHIGZ010000029.1 <> na Primary Assembly 262835 na HG04204#2#h2tg000061l unplaced-scaffold na na JBHIGZ010000030.1 <> na Primary Assembly 100545 na HG04204#2#h2tg000062l unplaced-scaffold na na JBHIGZ010000031.1 <> na Primary Assembly 86704 na HG04204#2#h2tg000066l unplaced-scaffold na na JBHIGZ010000032.1 <> na Primary Assembly 200158 na HG04204#2#h2tg000069l unplaced-scaffold na na JBHIGZ010000033.1 <> na Primary Assembly 119540 na HG04204#2#h2tg000071l unplaced-scaffold na na JBHIGZ010000034.1 <> na Primary Assembly 65755 na HG04204#2#h2tg000074l unplaced-scaffold na na JBHIGZ010000035.1 <> na Primary Assembly 390531 na HG04204#2#h2tg000076l unplaced-scaffold na na JBHIGZ010000036.1 <> na Primary Assembly 86494 na HG04204#2#h2tg000082l unplaced-scaffold na na JBHIGZ010000037.1 <> na Primary Assembly 69720 na HG04204#2#h2tg000083l unplaced-scaffold na na JBHIGZ010000038.1 <> na Primary Assembly 109827 na HG04204#2#h2tg000087l unplaced-scaffold na na JBHIGZ010000039.1 <> na Primary Assembly 123747 na HG04204#2#h2tg000088l unplaced-scaffold na na JBHIGZ010000040.1 <> na Primary Assembly 191979 na HG04204#2#h2tg000092l unplaced-scaffold na na JBHIGZ010000041.1 <> na Primary Assembly 143630 na HG04204#2#h2tg000095l unplaced-scaffold na na JBHIGZ010000042.1 <> na Primary Assembly 121863 na HG04204#2#h2tg000100l unplaced-scaffold na na JBHIGZ010000043.1 <> na Primary Assembly 182906 na HG04204#2#h2tg000103l unplaced-scaffold na na JBHIGZ010000044.1 <> na Primary Assembly 123481 na HG04204#2#h2tg000119l unplaced-scaffold na na JBHIGZ010000045.1 <> na Primary Assembly 59200 na HG04204#2#h2tg000126l unplaced-scaffold na na JBHIGZ010000046.1 <> na Primary Assembly 126042 na HG04204#2#h2tg000001l unplaced-scaffold na na JBHIGZ010000047.1 <> na Primary Assembly 229739210 na HG04204#2#h2tg000006l unplaced-scaffold na na JBHIGZ010000049.1 <> na Primary Assembly 134007647 na HG04204#2#h2tg000018l unplaced-scaffold na na JBHIGZ010000052.1 <> na Primary Assembly 983378 na HG04204#2#h2tg000022l unplaced-scaffold na na JBHIGZ010000054.1 <> na Primary Assembly 61875996 na HG04204#2#h2tg000027l unplaced-scaffold na na JBHIGZ010000055.1 <> na Primary Assembly 92561029 na HG04204#2#h2tg000028l unplaced-scaffold na na JBHIGZ010000056.1 <> na Primary Assembly 17990416 na HG04204#2#h2tg000032l unplaced-scaffold na na JBHIGZ010000058.1 <> na Primary Assembly 18999657 na HG04204#2#h2tg000033l unplaced-scaffold na na JBHIGZ010000059.1 <> na Primary Assembly 2937025 na HG04204#2#h2tg000037l unplaced-scaffold na na JBHIGZ010000060.1 <> na Primary Assembly 3959603 na HG04204#2#h2tg000038l unplaced-scaffold na na JBHIGZ010000061.1 <> na Primary Assembly 233921 na HG04204#2#h2tg000040l unplaced-scaffold na na JBHIGZ010000062.1 <> na Primary Assembly 111341 na HG04204#2#h2tg000041l unplaced-scaffold na na JBHIGZ010000063.1 <> na Primary Assembly 52018 na HG04204#2#h2tg000042l unplaced-scaffold na na JBHIGZ010000064.1 <> na Primary Assembly 2960590 na HG04204#2#h2tg000043l unplaced-scaffold na na JBHIGZ010000065.1 <> na Primary Assembly 3410636 na HG04204#2#h2tg000044l unplaced-scaffold na na JBHIGZ010000066.1 <> na Primary Assembly 495962 na HG04204#2#h2tg000045l unplaced-scaffold na na JBHIGZ010000067.1 <> na Primary Assembly 242929 na HG04204#2#h2tg000046l unplaced-scaffold na na JBHIGZ010000068.1 <> na Primary Assembly 3963802 na HG04204#2#h2tg000050l unplaced-scaffold na na JBHIGZ010000069.1 <> na Primary Assembly 258258 na HG04204#2#h2tg000052l unplaced-scaffold na na JBHIGZ010000070.1 <> na Primary Assembly 56918 na HG04204#2#h2tg000054l unplaced-scaffold na na JBHIGZ010000071.1 <> na Primary Assembly 152050 na HG04204#2#h2tg000055l unplaced-scaffold na na JBHIGZ010000072.1 <> na Primary Assembly 926164 na HG04204#2#h2tg000059l unplaced-scaffold na na JBHIGZ010000073.1 <> na Primary Assembly 139376 na HG04204#2#h2tg000063l unplaced-scaffold na na JBHIGZ010000074.1 <> na Primary Assembly 134884 na HG04204#2#h2tg000067l unplaced-scaffold na na JBHIGZ010000075.1 <> na Primary Assembly 55296 na HG04204#2#h2tg000068l unplaced-scaffold na na JBHIGZ010000076.1 <> na Primary Assembly 117315 na HG04204#2#h2tg000070l unplaced-scaffold na na JBHIGZ010000077.1 <> na Primary Assembly 181232 na HG04204#2#h2tg000073l unplaced-scaffold na na JBHIGZ010000078.1 <> na Primary Assembly 87147 na HG04204#2#h2tg000075l unplaced-scaffold na na JBHIGZ010000079.1 <> na Primary Assembly 52447 na HG04204#2#h2tg000077l unplaced-scaffold na na JBHIGZ010000080.1 <> na Primary Assembly 68416 na HG04204#2#h2tg000078l unplaced-scaffold na na JBHIGZ010000081.1 <> na Primary Assembly 52655 na HG04204#2#h2tg000079l unplaced-scaffold na na JBHIGZ010000082.1 <> na Primary Assembly 156362 na HG04204#2#h2tg000080l unplaced-scaffold na na JBHIGZ010000083.1 <> na Primary Assembly 138040 na HG04204#2#h2tg000084l unplaced-scaffold na na JBHIGZ010000084.1 <> na Primary Assembly 186073 na HG04204#2#h2tg000086l unplaced-scaffold na na JBHIGZ010000085.1 <> na Primary Assembly 91642 na HG04204#2#h2tg000089l unplaced-scaffold na na JBHIGZ010000086.1 <> na Primary Assembly 58336 na HG04204#2#h2tg000098l unplaced-scaffold na na JBHIGZ010000087.1 <> na Primary Assembly 73380 na HG04204#2#h2tg000099l unplaced-scaffold na na JBHIGZ010000088.1 <> na Primary Assembly 71296 na HG04204#2#h2tg000102l unplaced-scaffold na na JBHIGZ010000089.1 <> na Primary Assembly 55037 na HG04204#2#h2tg000104l unplaced-scaffold na na JBHIGZ010000090.1 <> na Primary Assembly 70806 na HG04204#2#h2tg000105l unplaced-scaffold na na JBHIGZ010000091.1 <> na Primary Assembly 64446 na HG04204#2#h2tg000107l unplaced-scaffold na na JBHIGZ010000092.1 <> na Primary Assembly 105042 na HG04204#2#h2tg000108l unplaced-scaffold na na JBHIGZ010000093.1 <> na Primary Assembly 92942 na HG04204#2#h2tg000109l unplaced-scaffold na na JBHIGZ010000094.1 <> na Primary Assembly 129365 na HG04204#2#h2tg000111l unplaced-scaffold na na JBHIGZ010000095.1 <> na Primary Assembly 65253 na HG04204#2#h2tg000112l unplaced-scaffold na na JBHIGZ010000096.1 <> na Primary Assembly 157870 na HG04204#2#h2tg000113l unplaced-scaffold na na JBHIGZ010000097.1 <> na Primary Assembly 55548 na HG04204#2#h2tg000114l unplaced-scaffold na na JBHIGZ010000098.1 <> na Primary Assembly 99914 na HG04204#2#h2tg000120l unplaced-scaffold na na JBHIGZ010000099.1 <> na Primary Assembly 80389 na HG04204#2#h2tg000122l unplaced-scaffold na na JBHIGZ010000100.1 <> na Primary Assembly 51967 na HG04204#2#h2tg000123l unplaced-scaffold na na JBHIGZ010000101.1 <> na Primary Assembly 60075 na HG04204#2#ptg000001l_rotated unlocalized-scaffold MT Mitochondrion JBHIGZ010000102.1 <> na non-nuclear 16567 na