# Assembly name: HG04228_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG04228 # Sex: male # Taxid: 9606 # BioSample: SAMN26267391 # BioProject: PRJNA1157250 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIHB01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 73x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042036915.1 # Linked assembly: GCA_042036925.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042037185.1 Primary Assembly ## GCA_042037205.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG04228#2#h2tg000005l assembled-molecule 1 Chromosome CM088505.1 <> na Primary Assembly 247272553 na HG04228#2#h2tg000020l assembled-molecule 2 Chromosome CM088506.1 <> na Primary Assembly 242128779 na HG04228#2#h2tg000017l assembled-molecule 5 Chromosome CM088507.1 <> na Primary Assembly 183368546 na HG04228#2#h2tg000004l assembled-molecule 6 Chromosome CM088508.1 <> na Primary Assembly 171550315 na HG04228#2#h2tg000013l assembled-molecule 7 Chromosome CM088509.1 <> na Primary Assembly 160959743 na HG04228#2#h2tg000011l assembled-molecule 8 Chromosome CM088510.1 <> na Primary Assembly 144600868 na HG04228#2#h2tg000003l assembled-molecule 9 Chromosome CM088511.1 <> na Primary Assembly 135975564 na HG04228#2#h2tg000015l assembled-molecule 10 Chromosome CM088512.1 <> na Primary Assembly 135255137 na HG04228#2#h2tg000014l assembled-molecule 11 Chromosome CM088513.1 <> na Primary Assembly 134981439 na HG04228#2#h2tg000021l assembled-molecule 12 Chromosome CM088514.1 <> na Primary Assembly 133433957 na HG04228#2#h2tg000002l assembled-molecule 14 Chromosome CM088515.1 <> na Primary Assembly 98546249 na HG04228#2#h2tg000007l assembled-molecule 16 Chromosome CM088516.1 <> na Primary Assembly 88717784 na HG04228#2#h2tg000022l assembled-molecule 17 Chromosome CM088517.1 <> na Primary Assembly 85289906 na HG04228#2#h2tg000012l assembled-molecule 19 Chromosome CM088518.1 <> na Primary Assembly 61730881 na HG04228#2#h2tg000018l assembled-molecule 20 Chromosome CM088519.1 <> na Primary Assembly 65849258 na HG04228#2#h2tg000001l unplaced-scaffold na na JBHIHB010000001.1 <> na Primary Assembly 44399647 na HG04228#2#h2tg000006l unplaced-scaffold na na JBHIHB010000003.1 <> na Primary Assembly 86589911 na HG04228#2#h2tg000009l unplaced-scaffold na na JBHIHB010000005.1 <> na Primary Assembly 140750022 na HG04228#2#h2tg000019l unplaced-scaffold na na JBHIHB010000010.1 <> na Primary Assembly 41260750 na HG04228#2#h2tg000023l unplaced-scaffold na na JBHIHB010000013.1 <> na Primary Assembly 51814955 na HG04228#2#h2tg000025l unplaced-scaffold na na JBHIHB010000014.1 <> na Primary Assembly 97269161 na HG04228#2#h2tg000032l unplaced-scaffold na na JBHIHB010000015.1 <> na Primary Assembly 20412172 na HG04228#2#h2tg000033l unplaced-scaffold na na JBHIHB010000016.1 <> na Primary Assembly 6804518 na HG04228#2#h2tg000034l unplaced-scaffold na na JBHIHB010000017.1 <> na Primary Assembly 1522503 na HG04228#2#h2tg000035l unplaced-scaffold na na JBHIHB010000018.1 <> na Primary Assembly 256267 na HG04228#2#h2tg000036l unplaced-scaffold na na JBHIHB010000019.1 <> na Primary Assembly 128525 na HG04228#2#h2tg000037l unplaced-scaffold na na JBHIHB010000020.1 <> na Primary Assembly 251891 na HG04228#2#h2tg000038l unplaced-scaffold na na JBHIHB010000021.1 <> na Primary Assembly 1424164 na HG04228#2#h2tg000041l unplaced-scaffold na na JBHIHB010000022.1 <> na Primary Assembly 2222324 na HG04228#2#h2tg000044l unplaced-scaffold na na JBHIHB010000023.1 <> na Primary Assembly 78377 na HG04228#2#h2tg000046l unplaced-scaffold na na JBHIHB010000024.1 <> na Primary Assembly 244762 na HG04228#2#h2tg000049l unplaced-scaffold na na JBHIHB010000025.1 <> na Primary Assembly 198471 na HG04228#2#h2tg000052l unplaced-scaffold na na JBHIHB010000026.1 <> na Primary Assembly 100091 na HG04228#2#h2tg000056l unplaced-scaffold na na JBHIHB010000027.1 <> na Primary Assembly 140683 na HG04228#2#h2tg000057l unplaced-scaffold na na JBHIHB010000028.1 <> na Primary Assembly 50531 na HG04228#2#h2tg000058l unplaced-scaffold na na JBHIHB010000029.1 <> na Primary Assembly 90806 na HG04228#2#h2tg000059l unplaced-scaffold na na JBHIHB010000030.1 <> na Primary Assembly 103638 na HG04228#2#h2tg000060l unplaced-scaffold na na JBHIHB010000031.1 <> na Primary Assembly 524112 na HG04228#2#h2tg000061l unplaced-scaffold na na JBHIHB010000032.1 <> na Primary Assembly 73199 na HG04228#2#h2tg000062l unplaced-scaffold na na JBHIHB010000033.1 <> na Primary Assembly 79401 na HG04228#2#h2tg000008l unplaced-scaffold na na JBHIHB010000037.1 <> na Primary Assembly 61331326 na HG04228#2#h2tg000010l unplaced-scaffold na na JBHIHB010000038.1 <> na Primary Assembly 93161527 na HG04228#2#h2tg000016l unplaced-scaffold na na JBHIHB010000041.1 <> na Primary Assembly 2614141 na HG04228#2#h2tg000024l unplaced-scaffold na na JBHIHB010000044.1 <> na Primary Assembly 82981490 na HG04228#2#h2tg000026l unplaced-scaffold na na JBHIHB010000045.1 <> na Primary Assembly 93323390 na HG04228#2#h2tg000027l unplaced-scaffold na na JBHIHB010000046.1 <> na Primary Assembly 2968032 na HG04228#2#h2tg000028l unplaced-scaffold na na JBHIHB010000047.1 <> na Primary Assembly 71274496 na HG04228#2#h2tg000030l unplaced-scaffold na na JBHIHB010000048.1 <> na Primary Assembly 79506 na HG04228#2#h2tg000031l unplaced-scaffold na na JBHIHB010000049.1 <> na Primary Assembly 21234113 na HG04228#2#h2tg000039l unplaced-scaffold na na JBHIHB010000050.1 <> na Primary Assembly 1509843 na HG04228#2#h2tg000040l unplaced-scaffold na na JBHIHB010000051.1 <> na Primary Assembly 133888 na HG04228#2#h2tg000042l unplaced-scaffold na na JBHIHB010000052.1 <> na Primary Assembly 538684 na HG04228#2#h2tg000043l unplaced-scaffold na na JBHIHB010000053.1 <> na Primary Assembly 1020924 na HG04228#2#h2tg000047l unplaced-scaffold na na JBHIHB010000054.1 <> na Primary Assembly 120576 na HG04228#2#h2tg000050l unplaced-scaffold na na JBHIHB010000055.1 <> na Primary Assembly 150516 na HG04228#2#h2tg000051l unplaced-scaffold na na JBHIHB010000056.1 <> na Primary Assembly 80832 na HG04228#2#h2tg000053l unplaced-scaffold na na JBHIHB010000057.1 <> na Primary Assembly 89572 na HG04228#2#h2tg000054l unplaced-scaffold na na JBHIHB010000058.1 <> na Primary Assembly 79509 na HG04228#2#h2tg000055l unplaced-scaffold na na JBHIHB010000059.1 <> na Primary Assembly 164288 na HG04228#2#h2tg000063l unplaced-scaffold na na JBHIHB010000060.1 <> na Primary Assembly 50224 na HG04228#2#h2tg000068l unplaced-scaffold na na JBHIHB010000061.1 <> na Primary Assembly 67431 na HG04228#2#atg000001l_rotated unlocalized-scaffold MT Mitochondrion JBHIHB010000062.1 <> na non-nuclear 16570 na