# Assembly name: ASM4388059v1 # Organism name: Megaderma spasma (lesser false vampire bat) # Infraspecific name: ecotype=Vietnam # Isolate: 20211001_DDb # Sex: male # Taxid: 9414 # BioSample: SAMN33550865 # BioProject: PRJNA940047 # Submitter: Bat1K # Date: 2024-10-28 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAREJN01 # Assembly method: Canu v. 2.2; medaka v. 1.4.3; purge-dups v. 1.2.3; Longranger v. 2.2.2; Scaff10X v. 4.2; Break10X v. 3.1; Bionano Solve v. 1.6.1; salsa v. 2.2; merfin v. 1.1; bwa-mem v. 0.7.17; deepvariant v. 1.2.0; bcftools v. 1.12 # Expected final version: yes # Genome coverage: 87x # Sequencing technology: Oxford Nanopore PromethION; Illumina NovaSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_043880595.1 # Linked assembly: GCA_043880535.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_043880835.1 Primary Assembly ## GCA_043880875.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name manual_scaffold_1 assembled-molecule 1 Chromosome CM093780.1 <> na Primary Assembly 244117117 na manual_scaffold_2 assembled-molecule 2 Chromosome CM093781.1 <> na Primary Assembly 179066351 na manual_scaffold_3 assembled-molecule 3 Chromosome CM093782.1 <> na Primary Assembly 163256535 na manual_scaffold_4 assembled-molecule 4 Chromosome CM093783.1 <> na Primary Assembly 160732940 na manual_scaffold_5 assembled-molecule 5 Chromosome CM093784.1 <> na Primary Assembly 153933118 na manual_scaffold_6 assembled-molecule 6 Chromosome CM093785.1 <> na Primary Assembly 136213956 na manual_scaffold_7 assembled-molecule 7 Chromosome CM093786.1 <> na Primary Assembly 114289827 na manual_scaffold_8 assembled-molecule 8 Chromosome CM093787.1 <> na Primary Assembly 104163448 na manual_scaffold_9 assembled-molecule 9 Chromosome CM093788.1 <> na Primary Assembly 99383847 na manual_scaffold_10 assembled-molecule 10 Chromosome CM093789.1 <> na Primary Assembly 85651072 na manual_scaffold_11 assembled-molecule 11 Chromosome CM093790.1 <> na Primary Assembly 84083090 na manual_scaffold_12 assembled-molecule 12 Chromosome CM093791.1 <> na Primary Assembly 83003586 na manual_scaffold_13 assembled-molecule 13 Chromosome CM093792.1 <> na Primary Assembly 79331738 na manual_scaffold_14 assembled-molecule 14 Chromosome CM093793.1 <> na Primary Assembly 58958201 na manual_scaffold_15 assembled-molecule 15 Chromosome CM093794.1 <> na Primary Assembly 58899302 na manual_scaffold_16 assembled-molecule 16 Chromosome CM093795.1 <> na Primary Assembly 57270177 na manual_scaffold_17 assembled-molecule 17 Chromosome CM093796.1 <> na Primary Assembly 46693450 na manual_scaffold_18 assembled-molecule 18 Chromosome CM093797.1 <> na Primary Assembly 41767603 na manual_scaffold_19 assembled-molecule X Chromosome CM093798.1 <> na Primary Assembly 120949103 na manual_scaffold_20 unplaced-scaffold na na JAREJN010000020.1 <> na Primary Assembly 1548862 na manual_scaffold_21 unplaced-scaffold na na JAREJN010000021.1 <> na Primary Assembly 1331473 na manual_scaffold_22 unplaced-scaffold na na JAREJN010000022.1 <> na Primary Assembly 844716 na manual_scaffold_23 unplaced-scaffold na na JAREJN010000023.1 <> na Primary Assembly 1253401 na manual_scaffold_24 unplaced-scaffold na na JAREJN010000024.1 <> na Primary Assembly 1090739 na manual_scaffold_25 unplaced-scaffold na na JAREJN010000025.1 <> na Primary Assembly 1079700 na manual_scaffold_26 unplaced-scaffold na na JAREJN010000026.1 <> na Primary Assembly 821112 na manual_scaffold_27 unplaced-scaffold na na JAREJN010000027.1 <> na Primary Assembly 845569 na manual_scaffold_28 unplaced-scaffold na na JAREJN010000028.1 <> na Primary Assembly 979092 na manual_scaffold_29 unplaced-scaffold na na JAREJN010000029.1 <> na Primary Assembly 977362 na manual_scaffold_30 unplaced-scaffold na na JAREJN010000030.1 <> na Primary Assembly 946139 na manual_scaffold_31 unplaced-scaffold na na JAREJN010000031.1 <> na Primary Assembly 930799 na manual_scaffold_32 unplaced-scaffold na na JAREJN010000032.1 <> na Primary Assembly 921943 na manual_scaffold_33 unplaced-scaffold na na JAREJN010000033.1 <> na Primary Assembly 860645 na manual_scaffold_34 unplaced-scaffold na na JAREJN010000034.1 <> na Primary Assembly 450376 na manual_scaffold_35 unplaced-scaffold na na JAREJN010000035.1 <> na Primary Assembly 229633 na manual_scaffold_36 unplaced-scaffold na na JAREJN010000036.1 <> na Primary Assembly 304944 na manual_scaffold_37 unplaced-scaffold na na JAREJN010000037.1 <> na Primary Assembly 573132 na manual_scaffold_38 unplaced-scaffold na na JAREJN010000038.1 <> na Primary Assembly 777773 na manual_scaffold_39 unplaced-scaffold na na JAREJN010000039.1 <> na Primary Assembly 734606 na manual_scaffold_40 unplaced-scaffold na na JAREJN010000040.1 <> na Primary Assembly 626367 na manual_scaffold_41 unplaced-scaffold na na JAREJN010000041.1 <> na Primary Assembly 358480 na manual_scaffold_42 unplaced-scaffold na na JAREJN010000042.1 <> na Primary Assembly 578020 na manual_scaffold_43 unplaced-scaffold na na JAREJN010000043.1 <> na Primary Assembly 193475 na manual_scaffold_44 unplaced-scaffold na na JAREJN010000044.1 <> na Primary Assembly 674250 na manual_scaffold_45 unplaced-scaffold na na JAREJN010000045.1 <> na Primary Assembly 663771 na manual_scaffold_46 unplaced-scaffold na na JAREJN010000046.1 <> na Primary Assembly 659293 na manual_scaffold_47 unplaced-scaffold na na JAREJN010000047.1 <> na Primary Assembly 212125 na manual_scaffold_48 unplaced-scaffold na na JAREJN010000048.1 <> na Primary Assembly 636527 na manual_scaffold_49 unplaced-scaffold na na JAREJN010000049.1 <> na Primary Assembly 624062 na manual_scaffold_50 unplaced-scaffold na na JAREJN010000050.1 <> na Primary Assembly 586089 na manual_scaffold_51 unplaced-scaffold na na JAREJN010000051.1 <> na Primary Assembly 581815 na manual_scaffold_52 unplaced-scaffold na na JAREJN010000052.1 <> na Primary Assembly 570155 na manual_scaffold_53 unplaced-scaffold na na JAREJN010000053.1 <> na Primary Assembly 552860 na manual_scaffold_54 unplaced-scaffold na na JAREJN010000054.1 <> na Primary Assembly 107403 na manual_scaffold_55 unplaced-scaffold na na JAREJN010000055.1 <> na Primary Assembly 117221 na manual_scaffold_56 unplaced-scaffold na na JAREJN010000056.1 <> na Primary Assembly 440355 na manual_scaffold_57 unplaced-scaffold na na JAREJN010000057.1 <> na Primary Assembly 438405 na manual_scaffold_58 unplaced-scaffold na na JAREJN010000058.1 <> na Primary Assembly 434541 na manual_scaffold_59 unplaced-scaffold na na JAREJN010000059.1 <> na Primary Assembly 407049 na manual_scaffold_60 unplaced-scaffold na na JAREJN010000060.1 <> na Primary Assembly 398529 na manual_scaffold_61 unplaced-scaffold na na JAREJN010000061.1 <> na Primary Assembly 394290 na manual_scaffold_62 unplaced-scaffold na na JAREJN010000062.1 <> na Primary Assembly 370600 na manual_scaffold_63 unplaced-scaffold na na JAREJN010000063.1 <> na Primary Assembly 329274 na manual_scaffold_64 unplaced-scaffold na na JAREJN010000064.1 <> na Primary Assembly 353090 na manual_scaffold_65 unplaced-scaffold na na JAREJN010000065.1 <> na Primary Assembly 345739 na manual_scaffold_66 unplaced-scaffold na na JAREJN010000066.1 <> na Primary Assembly 334039 na manual_scaffold_67 unplaced-scaffold na na JAREJN010000067.1 <> na Primary Assembly 328878 na manual_scaffold_68 unplaced-scaffold na na JAREJN010000068.1 <> na Primary Assembly 326901 na manual_scaffold_69 unplaced-scaffold na 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manual_scaffold_80 unplaced-scaffold na na JAREJN010000080.1 <> na Primary Assembly 254739 na manual_scaffold_81 unplaced-scaffold na na JAREJN010000081.1 <> na Primary Assembly 246736 na manual_scaffold_82 unplaced-scaffold na na JAREJN010000082.1 <> na Primary Assembly 242751 na manual_scaffold_83 unplaced-scaffold na na JAREJN010000083.1 <> na Primary Assembly 238792 na manual_scaffold_84 unplaced-scaffold na na JAREJN010000084.1 <> na Primary Assembly 229412 na manual_scaffold_85 unplaced-scaffold na na JAREJN010000085.1 <> na Primary Assembly 219971 na manual_scaffold_86 unplaced-scaffold na na JAREJN010000086.1 <> na Primary Assembly 219511 na manual_scaffold_87 unplaced-scaffold na na JAREJN010000087.1 <> na Primary Assembly 219081 na manual_scaffold_88 unplaced-scaffold na na JAREJN010000088.1 <> na Primary Assembly 211500 na manual_scaffold_89 unplaced-scaffold na na JAREJN010000089.1 <> na Primary Assembly 138764 na manual_scaffold_90 unplaced-scaffold na na JAREJN010000090.1 <> na Primary Assembly 208588 na manual_scaffold_91 unplaced-scaffold na na JAREJN010000091.1 <> na Primary Assembly 207331 na manual_scaffold_92 unplaced-scaffold na na JAREJN010000092.1 <> na Primary Assembly 197077 na manual_scaffold_93 unplaced-scaffold na na JAREJN010000093.1 <> na Primary Assembly 195899 na manual_scaffold_94 unplaced-scaffold na na JAREJN010000094.1 <> na Primary Assembly 194390 na manual_scaffold_95 unplaced-scaffold na na JAREJN010000095.1 <> na Primary Assembly 104259 na manual_scaffold_96 unplaced-scaffold na na JAREJN010000096.1 <> na Primary Assembly 190858 na manual_scaffold_97 unplaced-scaffold na na JAREJN010000097.1 <> na Primary Assembly 179319 na manual_scaffold_98 unplaced-scaffold na na JAREJN010000098.1 <> na Primary Assembly 173023 na manual_scaffold_99 unplaced-scaffold na na JAREJN010000099.1 <> na Primary Assembly 170996 na manual_scaffold_100 unplaced-scaffold na na JAREJN010000100.1 <> na Primary Assembly 164708 na manual_scaffold_101 unplaced-scaffold na na JAREJN010000101.1 <> na Primary Assembly 156392 na manual_scaffold_102 unplaced-scaffold na na JAREJN010000102.1 <> na Primary Assembly 153608 na manual_scaffold_103 unplaced-scaffold na na JAREJN010000103.1 <> na Primary Assembly 152566 na manual_scaffold_104 unplaced-scaffold na na JAREJN010000104.1 <> na Primary Assembly 151771 na manual_scaffold_105 unplaced-scaffold na na JAREJN010000105.1 <> na Primary Assembly 148205 na manual_scaffold_106 unplaced-scaffold na na JAREJN010000106.1 <> na Primary Assembly 146300 na manual_scaffold_107 unplaced-scaffold na na JAREJN010000107.1 <> na Primary Assembly 145106 na manual_scaffold_109 unplaced-scaffold na na JAREJN010000108.1 <> na Primary Assembly 141064 na manual_scaffold_110 unplaced-scaffold na na JAREJN010000109.1 <> na Primary Assembly 140530 na manual_scaffold_111 unplaced-scaffold na na JAREJN010000110.1 <> na Primary Assembly 140125 na manual_scaffold_112 unplaced-scaffold na na JAREJN010000111.1 <> na Primary Assembly 139191 na manual_scaffold_113 unplaced-scaffold na na JAREJN010000112.1 <> na Primary Assembly 140006 na manual_scaffold_114 unplaced-scaffold na na JAREJN010000113.1 <> na Primary Assembly 136093 na manual_scaffold_115 unplaced-scaffold na na JAREJN010000114.1 <> na Primary Assembly 132628 na manual_scaffold_116 unplaced-scaffold na na JAREJN010000115.1 <> na Primary Assembly 131589 na manual_scaffold_117 unplaced-scaffold na na JAREJN010000116.1 <> na Primary Assembly 131153 na manual_scaffold_118 unplaced-scaffold na na JAREJN010000117.1 <> na Primary Assembly 130593 na manual_scaffold_119 unplaced-scaffold na na JAREJN010000118.1 <> na Primary Assembly 128554 na manual_scaffold_120 unplaced-scaffold na na JAREJN010000119.1 <> na Primary Assembly 127412 na manual_scaffold_121 unplaced-scaffold na na JAREJN010000120.1 <> na Primary Assembly 119487 na manual_scaffold_122 unplaced-scaffold na na JAREJN010000121.1 <> na Primary Assembly 117812 na manual_scaffold_123 unplaced-scaffold na na JAREJN010000122.1 <> na Primary Assembly 117156 na manual_scaffold_124 unplaced-scaffold na na JAREJN010000123.1 <> na Primary Assembly 114047 na manual_scaffold_125 unplaced-scaffold na na JAREJN010000124.1 <> na Primary Assembly 111445 na manual_scaffold_126 unplaced-scaffold na na JAREJN010000125.1 <> na Primary Assembly 111812 na manual_scaffold_127 unplaced-scaffold na na JAREJN010000126.1 <> na Primary Assembly 110173 na manual_scaffold_128 unplaced-scaffold na na JAREJN010000127.1 <> na Primary Assembly 109199 na manual_scaffold_129 unplaced-scaffold na na JAREJN010000128.1 <> na Primary Assembly 109174 na manual_scaffold_130 unplaced-scaffold na na JAREJN010000129.1 <> na Primary Assembly 106775 na manual_scaffold_131 unplaced-scaffold na na JAREJN010000130.1 <> na Primary Assembly 105955 na manual_scaffold_132 unplaced-scaffold na na JAREJN010000131.1 <> na Primary Assembly 106004 na manual_scaffold_133 unplaced-scaffold na na JAREJN010000132.1 <> na Primary Assembly 105006 na manual_scaffold_134 unplaced-scaffold na na JAREJN010000133.1 <> na Primary Assembly 104821 na manual_scaffold_135 unplaced-scaffold na na JAREJN010000134.1 <> na Primary Assembly 103622 na manual_scaffold_136 unplaced-scaffold na na JAREJN010000135.1 <> na Primary Assembly 102213 na manual_scaffold_137 unplaced-scaffold na na JAREJN010000136.1 <> na Primary Assembly 101928 na manual_scaffold_138 unplaced-scaffold na na JAREJN010000137.1 <> na Primary Assembly 101245 na manual_scaffold_139 unplaced-scaffold na na JAREJN010000138.1 <> na Primary Assembly 98676 na manual_scaffold_140 unplaced-scaffold na na JAREJN010000139.1 <> na Primary Assembly 95426 na manual_scaffold_141 unplaced-scaffold na na JAREJN010000140.1 <> na Primary Assembly 95377 na manual_scaffold_143 unplaced-scaffold na na JAREJN010000141.1 <> na Primary Assembly 95011 na manual_scaffold_144 unplaced-scaffold na na JAREJN010000142.1 <> na Primary Assembly 94232 na manual_scaffold_145 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Assembly 82178 na manual_scaffold_156 unplaced-scaffold na na JAREJN010000154.1 <> na Primary Assembly 82098 na manual_scaffold_157 unplaced-scaffold na na JAREJN010000155.1 <> na Primary Assembly 81454 na manual_scaffold_158 unplaced-scaffold na na JAREJN010000156.1 <> na Primary Assembly 80075 na manual_scaffold_159 unplaced-scaffold na na JAREJN010000157.1 <> na Primary Assembly 79742 na manual_scaffold_160 unplaced-scaffold na na JAREJN010000158.1 <> na Primary Assembly 79752 na manual_scaffold_161 unplaced-scaffold na na JAREJN010000159.1 <> na Primary Assembly 79012 na manual_scaffold_162 unplaced-scaffold na na JAREJN010000160.1 <> na Primary Assembly 78945 na manual_scaffold_163 unplaced-scaffold na na JAREJN010000161.1 <> na Primary Assembly 78851 na manual_scaffold_164 unplaced-scaffold na na JAREJN010000162.1 <> na Primary Assembly 78184 na manual_scaffold_165 unplaced-scaffold na na JAREJN010000163.1 <> na Primary Assembly 76429 na manual_scaffold_166 unplaced-scaffold na 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