# Assembly name: HG00235_hap2_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG00235 # Sex: female # Taxid: 9606 # BioSample: SAMN41021667 # BioProject: PRJNA1178393 # Submitter: UCSC Genomics Institute # Date: 2024-10-31 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBIREE01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 62x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_044165735.1 # Linked assembly: GCA_044165645.1 (haplotype 1) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_044165915.1 Primary Assembly ## GCA_044165985.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG00235#2#h2tg000005l assembled-molecule 1 Chromosome CM094394.1 <> na Primary Assembly 246386378 na HG00235#2#h2tg000006l assembled-molecule 2 Chromosome CM094395.1 <> na Primary Assembly 242257091 na HG00235#2#h2tg000017l assembled-molecule 5 Chromosome CM094396.1 <> na Primary Assembly 183667235 na HG00235#2#h2tg000014l assembled-molecule 7 Chromosome CM094397.1 <> na Primary Assembly 160813858 na HG00235#2#h2tg000008l assembled-molecule 8 Chromosome CM094398.1 <> na Primary Assembly 145832087 na HG00235#2#h2tg000013l assembled-molecule 9 Chromosome CM094399.1 <> na Primary Assembly 138383887 na HG00235#2#h2tg000021l assembled-molecule 10 Chromosome CM094400.1 <> na Primary Assembly 134544783 na HG00235#2#h2tg000016l assembled-molecule 11 Chromosome CM094401.1 <> na Primary Assembly 134805934 na HG00235#2#h2tg000002l assembled-molecule 14 Chromosome CM094402.1 <> na Primary Assembly 100755663 na HG00235#2#h2tg000010l assembled-molecule 16 Chromosome CM094403.1 <> na Primary Assembly 89464347 na HG00235#2#h2tg000022l assembled-molecule 17 Chromosome CM094404.1 <> na Primary Assembly 84126906 na HG00235#2#h2tg000023l assembled-molecule 19 Chromosome CM094405.1 <> na Primary Assembly 61339476 na HG00235#2#h2tg000024l assembled-molecule 20 Chromosome CM094406.1 <> na Primary Assembly 66280532 na HG00235#2#h2tg000019l assembled-molecule 21 Chromosome CM094407.1 <> na Primary Assembly 42532530 na HG00235#2#h2tg000027l assembled-molecule 22 Chromosome CM094408.1 <> na Primary Assembly 53229129 na HG00235#2#h2tg000003l assembled-molecule X Chromosome CM094409.1 <> na Primary Assembly 154799432 na HG00235#2#h2tg000001l unplaced-scaffold na na JBIREE010000001.1 <> na Primary Assembly 119781788 na HG00235#2#h2tg000007l unplaced-scaffold na na JBIREE010000005.1 <> na Primary Assembly 101778679 na HG00235#2#h2tg000012l unplaced-scaffold na na JBIREE010000008.1 <> na Primary Assembly 111369569 na HG00235#2#h2tg000018l unplaced-scaffold na na JBIREE010000012.1 <> na Primary Assembly 60753901 na HG00235#2#h2tg000025l unplaced-scaffold na na JBIREE010000016.1 <> na Primary Assembly 19143972 na HG00235#2#h2tg000026l unplaced-scaffold na na JBIREE010000017.1 <> na Primary Assembly 94019272 na HG00235#2#h2tg000028l unplaced-scaffold na na JBIREE010000018.1 <> na Primary Assembly 13615239 na HG00235#2#h2tg000029l unplaced-scaffold na na JBIREE010000019.1 <> na Primary Assembly 71280 na HG00235#2#h2tg000032l unplaced-scaffold na na JBIREE010000020.1 <> na Primary Assembly 1020596 na HG00235#2#h2tg000036l unplaced-scaffold na na JBIREE010000021.1 <> na Primary Assembly 511728 na HG00235#2#h2tg000038l unplaced-scaffold na na JBIREE010000022.1 <> na Primary Assembly 72938 na HG00235#2#h2tg000040l unplaced-scaffold na na JBIREE010000023.1 <> na Primary Assembly 202111 na HG00235#2#h2tg000041l unplaced-scaffold na na JBIREE010000024.1 <> na Primary Assembly 304217 na HG00235#2#h2tg000043l unplaced-scaffold na na JBIREE010000025.1 <> na Primary Assembly 300192 na HG00235#2#h2tg000044l unplaced-scaffold na na JBIREE010000026.1 <> na Primary Assembly 173088 na HG00235#2#h2tg000046l unplaced-scaffold na na JBIREE010000027.1 <> na Primary Assembly 380077 na HG00235#2#h2tg000047l unplaced-scaffold na na JBIREE010000028.1 <> na Primary Assembly 446008 na HG00235#2#h2tg000050l unplaced-scaffold na na JBIREE010000029.1 <> na Primary Assembly 65581 na HG00235#2#h2tg000052l unplaced-scaffold na na JBIREE010000030.1 <> na Primary Assembly 56981 na HG00235#2#h2tg000054l unplaced-scaffold na na JBIREE010000031.1 <> na Primary Assembly 191681 na HG00235#2#h2tg000062l unplaced-scaffold na na JBIREE010000032.1 <> na Primary Assembly 58856 na HG00235#2#h2tg000067l unplaced-scaffold na na JBIREE010000033.1 <> na Primary Assembly 78740 na HG00235#2#h2tg000068l unplaced-scaffold na na JBIREE010000034.1 <> na Primary Assembly 71032 na HG00235#2#h2tg000069l unplaced-scaffold na na JBIREE010000035.1 <> na Primary Assembly 61111 na HG00235#2#h2tg000075l unplaced-scaffold na na JBIREE010000036.1 <> na Primary Assembly 105436 na HG00235#2#h2tg000004l unplaced-scaffold na na JBIREE010000038.1 <> na Primary Assembly 61796385 na HG00235#2#h2tg000009l unplaced-scaffold na na JBIREE010000039.1 <> na Primary Assembly 191748776 na HG00235#2#h2tg000011l unplaced-scaffold na na JBIREE010000040.1 <> na Primary Assembly 104012467 na HG00235#2#h2tg000015l unplaced-scaffold na na JBIREE010000041.1 <> na Primary Assembly 107615879 na HG00235#2#h2tg000020l unplaced-scaffold na na JBIREE010000043.1 <> na Primary Assembly 3193118 na HG00235#2#h2tg000030l unplaced-scaffold na na JBIREE010000047.1 <> na Primary Assembly 3330451 na HG00235#2#h2tg000033l unplaced-scaffold na na JBIREE010000048.1 <> na Primary Assembly 408914 na HG00235#2#h2tg000034l unplaced-scaffold na na JBIREE010000049.1 <> na Primary Assembly 3259401 na HG00235#2#h2tg000037l unplaced-scaffold na na JBIREE010000050.1 <> na Primary Assembly 155974 na HG00235#2#h2tg000039l unplaced-scaffold na na JBIREE010000051.1 <> na Primary Assembly 195529 na HG00235#2#h2tg000042l unplaced-scaffold na na JBIREE010000052.1 <> na Primary Assembly 209886 na HG00235#2#h2tg000049l unplaced-scaffold na na JBIREE010000053.1 <> na Primary Assembly 88048 na HG00235#2#h2tg000051l unplaced-scaffold na na JBIREE010000054.1 <> na Primary Assembly 181393 na HG00235#2#h2tg000055l unplaced-scaffold na na JBIREE010000055.1 <> na Primary Assembly 258575 na HG00235#2#h2tg000056l unplaced-scaffold na na JBIREE010000056.1 <> na Primary Assembly 638305 na HG00235#2#h2tg000060l unplaced-scaffold na na JBIREE010000057.1 <> na Primary Assembly 217284 na HG00235#2#h2tg000063l unplaced-scaffold na na JBIREE010000058.1 <> na Primary Assembly 84355 na HG00235#2#h2tg000065l unplaced-scaffold na na JBIREE010000059.1 <> na Primary Assembly 308122 na HG00235#2#h2tg000076l unplaced-scaffold na na JBIREE010000060.1 <> na Primary Assembly 76340 na HG00235#2#ptg000038l_rotated unlocalized-scaffold MT Mitochondrion JBIREE010000061.1 <> na non-nuclear 16570 na