# Assembly name: NA20809_hap2_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: NA20809 # Sex: male # Taxid: 9606 # BioSample: SAMN41021671 # BioProject: PRJNA1178391 # Submitter: UCSC Genomics Institute # Date: 2024-10-31 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBIREA01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 59x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_044166615.1 # Linked assembly: GCA_044166435.1 (haplotype 1) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_044166655.1 Primary Assembly ## GCA_044166675.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NA20809#2#h2tg000034l assembled-molecule 2 Chromosome CM094349.1 <> na Primary Assembly 243321920 na NA20809#2#h2tg000014l assembled-molecule 5 Chromosome CM094350.1 <> na Primary Assembly 182971133 na NA20809#2#h2tg000012l assembled-molecule 6 Chromosome CM094351.1 <> na Primary Assembly 172144193 na NA20809#2#h2tg000009l assembled-molecule 7 Chromosome CM094352.1 <> na Primary Assembly 160843719 na NA20809#2#h2tg000010l assembled-molecule 8 Chromosome CM094353.1 <> na Primary Assembly 148168121 na NA20809#2#h2tg000004l assembled-molecule 11 Chromosome CM094354.1 <> na Primary Assembly 135633867 na NA20809#2#h2tg000006l assembled-molecule 12 Chromosome CM094355.1 <> na Primary Assembly 133664368 na NA20809#2#h2tg000023l assembled-molecule 20 Chromosome CM094356.1 <> na Primary Assembly 67155433 na NA20809#2#h2tg000001l unplaced-scaffold na na JBIREA010000001.1 <> na Primary Assembly 73011499 na NA20809#2#h2tg000005l unplaced-scaffold na na JBIREA010000003.1 <> na Primary Assembly 85291519 na NA20809#2#h2tg000011l unplaced-scaffold na na JBIREA010000005.1 <> na Primary Assembly 60908035 na NA20809#2#h2tg000013l unplaced-scaffold na na JBIREA010000007.1 <> na Primary Assembly 55352900 na NA20809#2#h2tg000017l unplaced-scaffold na na JBIREA010000009.1 <> na Primary Assembly 84229348 na NA20809#2#h2tg000020l unplaced-scaffold na na JBIREA010000010.1 <> na Primary Assembly 97145756 na NA20809#2#h2tg000022l unplaced-scaffold na na JBIREA010000011.1 <> na Primary Assembly 38954688 na NA20809#2#h2tg000025l unplaced-scaffold na na JBIREA010000012.1 <> na Primary Assembly 99232257 na NA20809#2#h2tg000027l unplaced-scaffold na na JBIREA010000013.1 <> na Primary Assembly 52941037 na NA20809#2#h2tg000029l unplaced-scaffold na na JBIREA010000014.1 <> na Primary Assembly 92610545 na NA20809#2#h2tg000030l unplaced-scaffold na na JBIREA010000015.1 <> na Primary Assembly 10820844 na NA20809#2#h2tg000032l unplaced-scaffold na na JBIREA010000016.1 <> na Primary Assembly 17718280 na NA20809#2#h2tg000033l unplaced-scaffold na na JBIREA010000017.1 <> na Primary Assembly 24808190 na NA20809#2#h2tg000037l unplaced-scaffold na na JBIREA010000019.1 <> na Primary Assembly 7723229 na NA20809#2#h2tg000044l unplaced-scaffold na na JBIREA010000020.1 <> na Primary Assembly 1671920 na NA20809#2#h2tg000047l unplaced-scaffold na na JBIREA010000021.1 <> na Primary Assembly 136782 na NA20809#2#h2tg000049l unplaced-scaffold na na JBIREA010000022.1 <> na Primary Assembly 3548839 na NA20809#2#h2tg000055l unplaced-scaffold na na JBIREA010000023.1 <> na Primary Assembly 239021 na NA20809#2#h2tg000058l unplaced-scaffold na na JBIREA010000024.1 <> na Primary Assembly 363429 na NA20809#2#h2tg000062l unplaced-scaffold na na JBIREA010000025.1 <> na Primary Assembly 86941 na NA20809#2#h2tg000064l unplaced-scaffold na na JBIREA010000026.1 <> na Primary Assembly 325881 na NA20809#2#h2tg000069l unplaced-scaffold na na JBIREA010000027.1 <> na Primary Assembly 534967 na NA20809#2#h2tg000071l unplaced-scaffold na na JBIREA010000028.1 <> na Primary Assembly 628954 na NA20809#2#h2tg000073l unplaced-scaffold na na JBIREA010000029.1 <> na Primary Assembly 80363 na NA20809#2#h2tg000075l unplaced-scaffold na na JBIREA010000030.1 <> na Primary Assembly 237755 na NA20809#2#h2tg000080l unplaced-scaffold na na JBIREA010000031.1 <> na Primary Assembly 75842 na NA20809#2#h2tg000081l unplaced-scaffold na na JBIREA010000032.1 <> na Primary Assembly 63065 na NA20809#2#h2tg000083l unplaced-scaffold na na JBIREA010000033.1 <> na Primary Assembly 184636 na NA20809#2#h2tg000087l unplaced-scaffold na na JBIREA010000034.1 <> na Primary Assembly 335571 na NA20809#2#h2tg000089l unplaced-scaffold na na JBIREA010000035.1 <> na Primary Assembly 262754 na NA20809#2#h2tg000091l unplaced-scaffold na na JBIREA010000036.1 <> na Primary Assembly 119581 na NA20809#2#h2tg000092l unplaced-scaffold na na JBIREA010000037.1 <> na Primary Assembly 54873 na NA20809#2#h2tg000093l unplaced-scaffold na na JBIREA010000038.1 <> na Primary Assembly 194204 na NA20809#2#h2tg000094l unplaced-scaffold na na JBIREA010000039.1 <> na Primary Assembly 72299 na NA20809#2#h2tg000101l unplaced-scaffold na na JBIREA010000040.1 <> na Primary Assembly 163280 na NA20809#2#h2tg000106l unplaced-scaffold na na JBIREA010000041.1 <> na Primary Assembly 75113 na NA20809#2#h2tg000107l unplaced-scaffold na na JBIREA010000042.1 <> na Primary Assembly 86103 na NA20809#2#h2tg000113l unplaced-scaffold na na JBIREA010000043.1 <> na Primary Assembly 61687 na NA20809#2#h2tg000125l unplaced-scaffold na na JBIREA010000044.1 <> na Primary Assembly 63733 na NA20809#2#h2tg000132l unplaced-scaffold na na JBIREA010000045.1 <> na Primary Assembly 50192 na NA20809#2#h1tg000083l unplaced-scaffold na na JBIREA010000046.1 <> na Primary Assembly 57767 na NA20809#2#h1tg000127l unplaced-scaffold na na JBIREA010000047.1 <> na Primary Assembly 57542 na NA20809#2#h2tg000002l unplaced-scaffold na na JBIREA010000048.1 <> na Primary Assembly 140241493 na NA20809#2#h2tg000003l unplaced-scaffold na na JBIREA010000049.1 <> na Primary Assembly 141046022 na NA20809#2#h2tg000007l unplaced-scaffold na na JBIREA010000050.1 <> na Primary Assembly 21132127 na NA20809#2#h2tg000008l unplaced-scaffold na na JBIREA010000051.1 <> na Primary Assembly 135497605 na NA20809#2#h2tg000015l unplaced-scaffold na na JBIREA010000054.1 <> na Primary Assembly 35659728 na NA20809#2#h2tg000016l unplaced-scaffold na na JBIREA010000055.1 <> na Primary Assembly 51155760 na NA20809#2#h2tg000018l unplaced-scaffold na na JBIREA010000056.1 <> na Primary Assembly 51161528 na NA20809#2#h2tg000019l unplaced-scaffold na na JBIREA010000057.1 <> na Primary Assembly 99684806 na NA20809#2#h2tg000021l unplaced-scaffold na na JBIREA010000058.1 <> na Primary Assembly 108438243 na NA20809#2#h2tg000024l unplaced-scaffold na na JBIREA010000060.1 <> na Primary Assembly 61989998 na NA20809#2#h2tg000026l unplaced-scaffold na na JBIREA010000061.1 <> na Primary Assembly 737749 na NA20809#2#h2tg000028l unplaced-scaffold na na JBIREA010000062.1 <> na Primary Assembly 139982 na NA20809#2#h2tg000031l unplaced-scaffold na na JBIREA010000063.1 <> na Primary Assembly 44401706 na NA20809#2#h2tg000035l unplaced-scaffold na na JBIREA010000064.1 <> na Primary Assembly 17239114 na NA20809#2#h2tg000036l unplaced-scaffold na na JBIREA010000065.1 <> na Primary Assembly 1049894 na NA20809#2#h2tg000038l unplaced-scaffold na na JBIREA010000066.1 <> na Primary Assembly 327166 na NA20809#2#h2tg000040l unplaced-scaffold na na JBIREA010000067.1 <> na Primary Assembly 1718810 na NA20809#2#h2tg000041l unplaced-scaffold na na JBIREA010000068.1 <> na Primary Assembly 16535489 na NA20809#2#h2tg000042l unplaced-scaffold na na JBIREA010000069.1 <> na Primary Assembly 1036112 na NA20809#2#h2tg000043l unplaced-scaffold na na JBIREA010000070.1 <> na Primary Assembly 2984458 na NA20809#2#h2tg000045l unplaced-scaffold na na JBIREA010000071.1 <> na Primary Assembly 59463 na NA20809#2#h2tg000046l unplaced-scaffold na na JBIREA010000072.1 <> na Primary Assembly 4059454 na NA20809#2#h2tg000048l unplaced-scaffold na na JBIREA010000073.1 <> na Primary Assembly 2575354 na NA20809#2#h2tg000050l unplaced-scaffold na na JBIREA010000074.1 <> na Primary Assembly 147987 na NA20809#2#h2tg000051l unplaced-scaffold na na JBIREA010000075.1 <> na Primary Assembly 107036 na NA20809#2#h2tg000054l unplaced-scaffold na na JBIREA010000076.1 <> na Primary Assembly 144592 na NA20809#2#h2tg000056l unplaced-scaffold na na JBIREA010000077.1 <> na Primary Assembly 1578874 na NA20809#2#h2tg000059l unplaced-scaffold na na JBIREA010000078.1 <> na Primary Assembly 2631335 na NA20809#2#h2tg000061l unplaced-scaffold na na JBIREA010000079.1 <> na Primary Assembly 146856 na NA20809#2#h2tg000063l unplaced-scaffold na na JBIREA010000080.1 <> na Primary Assembly 594483 na NA20809#2#h2tg000065l unplaced-scaffold na na JBIREA010000081.1 <> na Primary Assembly 53834 na NA20809#2#h2tg000066l unplaced-scaffold na na JBIREA010000082.1 <> na Primary Assembly 1136433 na NA20809#2#h2tg000068l unplaced-scaffold na na JBIREA010000083.1 <> na Primary Assembly 69854 na NA20809#2#h2tg000070l unplaced-scaffold na na JBIREA010000084.1 <> na Primary Assembly 319297 na NA20809#2#h2tg000072l unplaced-scaffold na na JBIREA010000085.1 <> na Primary Assembly 739020 na NA20809#2#h2tg000074l unplaced-scaffold na na JBIREA010000086.1 <> na Primary Assembly 458373 na NA20809#2#h2tg000076l unplaced-scaffold na na JBIREA010000087.1 <> na Primary Assembly 263401 na NA20809#2#h2tg000077l unplaced-scaffold na na JBIREA010000088.1 <> na Primary Assembly 343179 na NA20809#2#h2tg000078l unplaced-scaffold na na JBIREA010000089.1 <> na Primary Assembly 112692 na NA20809#2#h2tg000085l unplaced-scaffold na na JBIREA010000090.1 <> na Primary Assembly 77155 na NA20809#2#h2tg000086l unplaced-scaffold na na JBIREA010000091.1 <> na Primary Assembly 58752 na NA20809#2#h2tg000096l unplaced-scaffold na na JBIREA010000092.1 <> na Primary Assembly 157687 na NA20809#2#h2tg000098l unplaced-scaffold na na JBIREA010000093.1 <> na Primary Assembly 123484 na NA20809#2#h2tg000099l unplaced-scaffold na na JBIREA010000094.1 <> na Primary Assembly 100656 na NA20809#2#h2tg000100l unplaced-scaffold na na JBIREA010000095.1 <> na Primary Assembly 61746 na NA20809#2#h2tg000105l unplaced-scaffold na na JBIREA010000096.1 <> na Primary Assembly 74166 na NA20809#2#h2tg000109l unplaced-scaffold na na JBIREA010000097.1 <> na Primary Assembly 64669 na NA20809#2#h2tg000112l unplaced-scaffold na na JBIREA010000098.1 <> na Primary Assembly 69652 na NA20809#2#h2tg000115l unplaced-scaffold na na JBIREA010000099.1 <> na Primary Assembly 62428 na NA20809#2#h2tg000117l unplaced-scaffold na na JBIREA010000100.1 <> na Primary Assembly 136616 na NA20809#2#h2tg000123l unplaced-scaffold na na JBIREA010000101.1 <> na Primary Assembly 79016 na NA20809#2#h2tg000124l unplaced-scaffold na na JBIREA010000102.1 <> na Primary Assembly 60733 na NA20809#2#h2tg000133l unplaced-scaffold na na JBIREA010000103.1 <> na Primary Assembly 54039 na NA20809#2#ptg000001l_rc_rotated unlocalized-scaffold MT Mitochondrion JBIREA010000104.1 <> na non-nuclear 16569 na