# Assembly name: Lyon_Hypertensive # Organism name: Rattus norvegicus (Norway rat) # Isolate: RGD_10755352 # Sex: male # Taxid: 10116 # BioSample: SAMN44771830 # BioProject: PRJNA1186738 # Submitter: University of Kentucky # Date: 2024-12-04 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBJKTT01 # Assembly method: HiFiasm v. 0.19.9-r616 # Expected final version: yes # Genome coverage: 35.0x # Sequencing technology: Illumina NovaSeq; PacBio Sequel; HiC # GenBank assembly accession: GCA_045687965.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_045688625.1 Primary Assembly ## GCA_045688635.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chr1 assembled-molecule 1 Chromosome CM098978.1 <> na Primary Assembly 271494401 na chr2 assembled-molecule 2 Chromosome CM098979.1 <> na Primary Assembly 251352707 na chr3 assembled-molecule 3 Chromosome CM098980.1 <> na Primary Assembly 186841847 na chr4 assembled-molecule 4 Chromosome CM098981.1 <> na Primary Assembly 184885010 na chr5 assembled-molecule 5 Chromosome CM098982.1 <> na Primary Assembly 172929894 na chr6 assembled-molecule 6 Chromosome CM098983.1 <> na Primary Assembly 146276219 na chr7 assembled-molecule 7 Chromosome CM098984.1 <> na Primary Assembly 139969333 na chr8 assembled-molecule 8 Chromosome CM098985.1 <> na Primary Assembly 134187815 na chr9 assembled-molecule 9 Chromosome CM098986.1 <> na Primary Assembly 121469366 na chr10 assembled-molecule 10 Chromosome CM098987.1 <> na Primary Assembly 113039671 na chr11 assembled-molecule 11 Chromosome CM098988.1 <> na Primary Assembly 100735769 na chr12 assembled-molecule 12 Chromosome CM098989.1 <> na Primary Assembly 52384657 na chr13 assembled-molecule 13 Chromosome CM098990.1 <> na Primary Assembly 108862952 na chr14 assembled-molecule 14 Chromosome CM098991.1 <> na Primary Assembly 109745878 na chr15 assembled-molecule 15 Chromosome CM098992.1 <> na Primary Assembly 107156815 na chr16 assembled-molecule 16 Chromosome CM098993.1 <> na Primary Assembly 93220286 na chr17 assembled-molecule 17 Chromosome CM098994.1 <> na Primary Assembly 95309056 na chr18 assembled-molecule 18 Chromosome CM098995.1 <> na Primary Assembly 85952514 na chr19 assembled-molecule 19 Chromosome CM098996.1 <> na Primary Assembly 68258340 na chr20 assembled-molecule 20 Chromosome CM098997.1 <> na Primary Assembly 57159586 na chrX assembled-molecule X Chromosome CM098998.1 <> na Primary Assembly 155614182 na chrY assembled-molecule Y Chromosome CM098999.1 <> na Primary Assembly 77445738 na scaffold_187 unplaced-scaffold na na JBJKTT010000024.1 <> na Primary Assembly 46456 na scaffold_183 unplaced-scaffold na na JBJKTT010000025.1 <> na Primary Assembly 49699 na scaffold_259 unplaced-scaffold na na JBJKTT010000026.1 <> na Primary Assembly 27391 na scaffold_246 unplaced-scaffold na na JBJKTT010000027.1 <> na Primary Assembly 28750 na scaffold_140 unplaced-scaffold na na JBJKTT010000028.1 <> na Primary Assembly 110721 na scaffold_309 unplaced-scaffold na na JBJKTT010000029.1 <> na Primary Assembly 16409 na scaffold_209 unplaced-scaffold na na JBJKTT010000030.1 <> na Primary Assembly 37467 na scaffold_154 unplaced-scaffold na na JBJKTT010000031.1 <> na Primary Assembly 79618 na scaffold_265 unplaced-scaffold na na JBJKTT010000032.1 <> na Primary Assembly 25898 na scaffold_151 unplaced-scaffold na na JBJKTT010000033.1 <> na Primary Assembly 81766 na scaffold_134 unplaced-scaffold na na JBJKTT010000034.1 <> na Primary Assembly 121280 na scaffold_252 unplaced-scaffold na na JBJKTT010000035.1 <> na Primary Assembly 28125 na scaffold_130 unplaced-scaffold na na JBJKTT010000036.1 <> na Primary Assembly 151912 na scaffold_198 unplaced-scaffold na na JBJKTT010000037.1 <> na Primary Assembly 42318 na scaffold_228 unplaced-scaffold na na JBJKTT010000038.1 <> na Primary Assembly 31725 na scaffold_295 unplaced-scaffold na na JBJKTT010000039.1 <> na Primary Assembly 20188 na scaffold_185 unplaced-scaffold na na JBJKTT010000040.1 <> na Primary Assembly 47046 na scaffold_232 unplaced-scaffold na na JBJKTT010000041.1 <> na Primary Assembly 30934 na scaffold_60 unplaced-scaffold na na JBJKTT010000042.1 <> na Primary Assembly 1475410 na scaffold_115 unplaced-scaffold na na JBJKTT010000043.1 <> na Primary Assembly 236599 na scaffold_318 unplaced-scaffold na na JBJKTT010000044.1 <> na Primary Assembly 12490 na scaffold_267 unplaced-scaffold na na JBJKTT010000045.1 <> na Primary Assembly 25367 na scaffold_302 unplaced-scaffold na na JBJKTT010000046.1 <> na Primary Assembly 18271 na scaffold_202 unplaced-scaffold na na JBJKTT010000047.1 <> na Primary Assembly 40232 na scaffold_176 unplaced-scaffold na na JBJKTT010000048.1 <> na Primary Assembly 51881 na scaffold_270 unplaced-scaffold na na JBJKTT010000049.1 <> na Primary Assembly 25160 na scaffold_291 unplaced-scaffold na na JBJKTT010000050.1 <> na Primary Assembly 20626 na scaffold_184 unplaced-scaffold na na JBJKTT010000051.1 <> na Primary Assembly 48130 na scaffold_133 unplaced-scaffold na na JBJKTT010000052.1 <> na Primary Assembly 122583 na scaffold_157 unplaced-scaffold na na JBJKTT010000053.1 <> na Primary Assembly 75681 na scaffold_308 unplaced-scaffold na na JBJKTT010000054.1 <> na Primary Assembly 16518 na scaffold_179 unplaced-scaffold na na JBJKTT010000055.1 <> na Primary Assembly 50615 na scaffold_312 unplaced-scaffold na na JBJKTT010000056.1 <> na Primary Assembly 14977 na scaffold_316 unplaced-scaffold na na JBJKTT010000057.1 <> na Primary Assembly 13474 na scaffold_216 unplaced-scaffold na na JBJKTT010000058.1 <> na Primary Assembly 35092 na scaffold_238 unplaced-scaffold na na JBJKTT010000059.1 <> na Primary Assembly 29499 na scaffold_286 unplaced-scaffold na na JBJKTT010000060.1 <> na Primary Assembly 21466 na scaffold_180 unplaced-scaffold na na JBJKTT010000061.1 <> na Primary Assembly 50542 na scaffold_322 unplaced-scaffold na na JBJKTT010000062.1 <> na Primary Assembly 10864 na scaffold_222 unplaced-scaffold na na JBJKTT010000063.1 <> na Primary Assembly 33537 na scaffold_192 unplaced-scaffold na na JBJKTT010000064.1 <> na Primary Assembly 44556 na scaffold_258 unplaced-scaffold na na JBJKTT010000065.1 <> na Primary Assembly 27394 na scaffold_282 unplaced-scaffold na na JBJKTT010000066.1 <> na Primary Assembly 22852 na scaffold_261 unplaced-scaffold na na JBJKTT010000067.1 <> na Primary Assembly 27024 na scaffold_226 unplaced-scaffold na na JBJKTT010000068.1 <> na Primary Assembly 32309 na scaffold_274 unplaced-scaffold na na JBJKTT010000069.1 <> na Primary Assembly 24455 na scaffold_323 unplaced-scaffold na na JBJKTT010000070.1 <> na Primary Assembly 10624 na scaffold_146 unplaced-scaffold na na JBJKTT010000071.1 <> na Primary Assembly 93658 na scaffold_240 unplaced-scaffold na na JBJKTT010000072.1 <> na Primary Assembly 29410 na scaffold_223 unplaced-scaffold na na JBJKTT010000073.1 <> na Primary Assembly 33513 na scaffold_159 unplaced-scaffold na na JBJKTT010000074.1 <> na Primary Assembly 73001 na scaffold_227 unplaced-scaffold na na JBJKTT010000075.1 <> na Primary Assembly 31944 na scaffold_304 unplaced-scaffold na na JBJKTT010000076.1 <> na Primary Assembly 17307 na scaffold_142 unplaced-scaffold na na JBJKTT010000077.1 <> na Primary Assembly 107812 na scaffold_201 unplaced-scaffold na na JBJKTT010000078.1 <> na Primary Assembly 41051 na scaffold_301 unplaced-scaffold na na JBJKTT010000079.1 <> na Primary Assembly 18968 na scaffold_193 unplaced-scaffold na na JBJKTT010000080.1 <> na Primary Assembly 43756 na scaffold_213 unplaced-scaffold na na JBJKTT010000081.1 <> na Primary Assembly 35930 na scaffold_313 unplaced-scaffold na na JBJKTT010000082.1 <> na Primary Assembly 14951 na scaffold_175 unplaced-scaffold na na JBJKTT010000083.1 <> na Primary Assembly 54857 na scaffold_251 unplaced-scaffold na na JBJKTT010000084.1 <> na Primary Assembly 28206 na scaffold_317 unplaced-scaffold na na JBJKTT010000085.1 <> na Primary Assembly 12734 na scaffold_268 unplaced-scaffold na na JBJKTT010000086.1 <> na Primary Assembly 25328 na scaffold_231 unplaced-scaffold na na JBJKTT010000087.1 <> na Primary Assembly 30939 na scaffold_254 unplaced-scaffold na na JBJKTT010000088.1 <> na Primary Assembly 28032 na scaffold_128 unplaced-scaffold na na JBJKTT010000089.1 <> na Primary Assembly 157915 na scaffold_195 unplaced-scaffold na na JBJKTT010000090.1 <> na Primary Assembly 43045 na scaffold_149 unplaced-scaffold na na JBJKTT010000091.1 <> na Primary Assembly 84932 na scaffold_58 unplaced-scaffold na na JBJKTT010000092.1 <> na Primary Assembly 1503361 na scaffold_325 unplaced-scaffold na na JBJKTT010000093.1 <> na Primary Assembly 10253 na scaffold_225 unplaced-scaffold na na JBJKTT010000094.1 <> na Primary Assembly 32318 na scaffold_152 unplaced-scaffold na na JBJKTT010000095.1 <> na Primary Assembly 81528 na scaffold_188 unplaced-scaffold na na JBJKTT010000096.1 <> na Primary Assembly 46003 na scaffold_298 unplaced-scaffold na na JBJKTT010000097.1 <> na Primary Assembly 19763 na scaffold_241 unplaced-scaffold na na JBJKTT010000098.1 <> na Primary Assembly 29384 na scaffold_163 unplaced-scaffold na na JBJKTT010000099.1 <> na Primary Assembly 69530 na scaffold_315 unplaced-scaffold na na JBJKTT010000100.1 <> na Primary Assembly 14484 na scaffold_300 unplaced-scaffold na na JBJKTT010000101.1 <> na Primary Assembly 19416 na scaffold_177 unplaced-scaffold na na JBJKTT010000102.1 <> na Primary Assembly 51069 na scaffold_284 unplaced-scaffold na na JBJKTT010000103.1 <> na Primary Assembly 22304 na scaffold_321 unplaced-scaffold na na JBJKTT010000104.1 <> na Primary Assembly 11230 na scaffold_194 unplaced-scaffold na na JBJKTT010000105.1 <> na Primary Assembly 43138 na scaffold_98 unplaced-scaffold na na JBJKTT010000106.1 <> na Primary Assembly 425916 na scaffold_303 unplaced-scaffold na na JBJKTT010000107.1 <> na Primary Assembly 17547 na scaffold_203 unplaced-scaffold na na JBJKTT010000108.1 <> na Primary Assembly 39948 na scaffold_224 unplaced-scaffold na na JBJKTT010000109.1 <> na Primary Assembly 32429 na scaffold_191 unplaced-scaffold na na JBJKTT010000110.1 <> na Primary Assembly 44993 na scaffold_276 unplaced-scaffold na na JBJKTT010000111.1 <> na Primary Assembly 24128 na scaffold_311 unplaced-scaffold na na JBJKTT010000112.1 <> na Primary Assembly 15556 na scaffold_253 unplaced-scaffold na na JBJKTT010000113.1 <> na Primary Assembly 28121 na scaffold_257 unplaced-scaffold na na JBJKTT010000114.1 <> na Primary Assembly 27496 na scaffold_233 unplaced-scaffold na na JBJKTT010000115.1 <> na Primary Assembly 30610 na scaffold_214 unplaced-scaffold na na JBJKTT010000116.1 <> na Primary Assembly 35908 na scaffold_205 unplaced-scaffold na na JBJKTT010000117.1 <> na Primary Assembly 39307 na scaffold_210 unplaced-scaffold na na JBJKTT010000118.1 <> na Primary Assembly 36878 na scaffold_116 unplaced-scaffold na na JBJKTT010000119.1 <> na Primary Assembly 223827 na scaffold_310 unplaced-scaffold na na JBJKTT010000120.1 <> na Primary Assembly 16352 na scaffold_269 unplaced-scaffold na na JBJKTT010000121.1 <> na Primary Assembly 25322 na scaffold_235 unplaced-scaffold na na JBJKTT010000122.1 <> na Primary Assembly 30271 na scaffold_182 unplaced-scaffold na na JBJKTT010000123.1 <> na Primary Assembly 50271 na scaffold_174 unplaced-scaffold na na JBJKTT010000124.1 <> na Primary Assembly 55096 na scaffold_126 unplaced-scaffold na na JBJKTT010000125.1 <> na Primary Assembly 165897 na scaffold_320 unplaced-scaffold na na JBJKTT010000126.1 <> na Primary Assembly 11550 na scaffold_161 unplaced-scaffold na na JBJKTT010000127.1 <> na Primary Assembly 72646 na scaffold_171 unplaced-scaffold na na JBJKTT010000128.1 <> na Primary Assembly 59813 na scaffold_186 unplaced-scaffold na na JBJKTT010000129.1 <> na Primary Assembly 46766 na scaffold_138 unplaced-scaffold na na JBJKTT010000130.1 <> na Primary Assembly 117091 na scaffold_164 unplaced-scaffold na na JBJKTT010000131.1 <> na Primary Assembly 68276 na scaffold_190 unplaced-scaffold na na JBJKTT010000132.1 <> na Primary Assembly 45253 na scaffold_296 unplaced-scaffold na na JBJKTT010000133.1 <> na Primary Assembly 20071 na chrMT assembled-molecule MT Mitochondrion CM099022.1 <> na non-nuclear 16311 na