# Assembly name: HG04187_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG04187 # Sex: male # Taxid: 9606 # BioSample: SAMN37706911 # BioProject: PRJNA1195137 # Submitter: UCSC Genomics Institute # Date: 2024-12-11 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBJUVP01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 66x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_045999925.1 # Linked assembly: GCA_046000115.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_045999985.1 Primary Assembly ## GCA_046000015.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG04187#2#h2tg000015l assembled-molecule 2 Chromosome CM099753.1 <> na Primary Assembly 242327016 na HG04187#2#h2tg000013l assembled-molecule 4 Chromosome CM099754.1 <> na Primary Assembly 194261651 na HG04187#2#h2tg000016l assembled-molecule 5 Chromosome CM099755.1 <> na Primary Assembly 182765156 na HG04187#2#h2tg000014l assembled-molecule 6 Chromosome CM099756.1 <> na Primary Assembly 170669615 na HG04187#2#h2tg000022l assembled-molecule 7 Chromosome CM099757.1 <> na Primary Assembly 160887927 na HG04187#2#h2tg000025l assembled-molecule 8 Chromosome CM099758.1 <> na Primary Assembly 146658717 na HG04187#2#h2tg000023l assembled-molecule 9 Chromosome CM099759.1 <> na Primary Assembly 127248316 na HG04187#2#h2tg000011l assembled-molecule 10 Chromosome CM099760.1 <> na Primary Assembly 135347468 na HG04187#2#h2tg000009l assembled-molecule 11 Chromosome CM099761.1 <> na Primary Assembly 135684908 na HG04187#2#h2tg000012l assembled-molecule 12 Chromosome CM099762.1 <> na Primary Assembly 134732720 na HG04187#2#h2tg000024l assembled-molecule 16 Chromosome CM099763.1 <> na Primary Assembly 85984305 na HG04187#2#h2tg000005l assembled-molecule 17 Chromosome CM099764.1 <> na Primary Assembly 82081575 na HG04187#2#h2tg000007l assembled-molecule 18 Chromosome CM099765.1 <> na Primary Assembly 80475631 na HG04187#2#h2tg000002l assembled-molecule 19 Chromosome CM099766.1 <> na Primary Assembly 61541748 na HG04187#2#h2tg000010l assembled-molecule 20 Chromosome CM099767.1 <> na Primary Assembly 67850647 na HG04187#2#h2tg000006l unplaced-scaffold na na JBJUVP010000002.1 <> na Primary Assembly 96624086 na HG04187#2#h2tg000008l unplaced-scaffold na na JBJUVP010000004.1 <> na Primary Assembly 131319597 na HG04187#2#h2tg000017l unplaced-scaffold na na JBJUVP010000011.1 <> na Primary Assembly 39184643 na HG04187#2#h2tg000018l unplaced-scaffold na na JBJUVP010000012.1 <> na Primary Assembly 109792801 na HG04187#2#h2tg000019l unplaced-scaffold na na JBJUVP010000013.1 <> na Primary Assembly 102462072 na HG04187#2#h2tg000021l unplaced-scaffold na na JBJUVP010000014.1 <> na Primary Assembly 45120882 na HG04187#2#h2tg000027l unplaced-scaffold na na JBJUVP010000019.1 <> na Primary Assembly 6429151 na HG04187#2#h2tg000032l unplaced-scaffold na na JBJUVP010000020.1 <> na Primary Assembly 293425 na HG04187#2#h2tg000033l unplaced-scaffold na na JBJUVP010000021.1 <> na Primary Assembly 3173308 na HG04187#2#h2tg000034l unplaced-scaffold na na JBJUVP010000022.1 <> na Primary Assembly 116968 na HG04187#2#h2tg000035l unplaced-scaffold na na JBJUVP010000023.1 <> na Primary Assembly 144337 na HG04187#2#h2tg000037l unplaced-scaffold na na JBJUVP010000024.1 <> na Primary Assembly 242411 na HG04187#2#h2tg000039l unplaced-scaffold na na JBJUVP010000025.1 <> na Primary Assembly 218726 na HG04187#2#h2tg000040l unplaced-scaffold na na JBJUVP010000026.1 <> na Primary Assembly 131674 na HG04187#2#h2tg000043l unplaced-scaffold na na JBJUVP010000027.1 <> na Primary Assembly 2040036 na HG04187#2#h2tg000045l unplaced-scaffold na na JBJUVP010000028.1 <> na Primary Assembly 53354 na HG04187#2#h2tg000047l unplaced-scaffold na na JBJUVP010000029.1 <> na Primary Assembly 566035 na HG04187#2#h2tg000049l unplaced-scaffold na na JBJUVP010000030.1 <> na Primary Assembly 99201 na HG04187#2#h2tg000050l unplaced-scaffold na na JBJUVP010000031.1 <> na Primary Assembly 190170 na HG04187#2#h2tg000052l unplaced-scaffold na na JBJUVP010000032.1 <> na Primary Assembly 125427 na HG04187#2#h2tg000053l unplaced-scaffold na na JBJUVP010000033.1 <> na Primary Assembly 114463 na HG04187#2#h2tg000057l unplaced-scaffold na na JBJUVP010000034.1 <> na Primary Assembly 287140 na HG04187#2#h2tg000058l unplaced-scaffold na na JBJUVP010000035.1 <> na Primary Assembly 457417 na HG04187#2#h2tg000059l unplaced-scaffold na na JBJUVP010000036.1 <> na Primary Assembly 62409 na HG04187#2#h2tg000064l unplaced-scaffold na na JBJUVP010000037.1 <> na Primary Assembly 141113 na HG04187#2#h2tg000066l unplaced-scaffold na na JBJUVP010000038.1 <> na Primary Assembly 157979 na HG04187#2#h2tg000068l unplaced-scaffold na na JBJUVP010000039.1 <> na Primary Assembly 147762 na HG04187#2#h2tg000069l unplaced-scaffold na na JBJUVP010000040.1 <> na Primary Assembly 56981 na HG04187#2#h2tg000071l unplaced-scaffold na na JBJUVP010000041.1 <> na Primary Assembly 91785 na HG04187#2#h2tg000076l unplaced-scaffold na na JBJUVP010000042.1 <> na Primary Assembly 412101 na HG04187#2#h2tg000079l unplaced-scaffold na na JBJUVP010000043.1 <> na Primary Assembly 77608 na HG04187#2#h2tg000080l unplaced-scaffold na na JBJUVP010000044.1 <> na Primary Assembly 147097 na HG04187#2#h2tg000084l unplaced-scaffold na na JBJUVP010000045.1 <> na Primary Assembly 79034 na HG04187#2#h2tg000085l unplaced-scaffold na na JBJUVP010000046.1 <> na Primary Assembly 78142 na HG04187#2#h2tg000087l unplaced-scaffold na na JBJUVP010000047.1 <> na Primary Assembly 143414 na HG04187#2#h2tg000089l unplaced-scaffold na na JBJUVP010000048.1 <> na Primary Assembly 88820 na HG04187#2#h2tg000093l unplaced-scaffold na na JBJUVP010000049.1 <> na Primary Assembly 107866 na HG04187#2#h2tg000105l unplaced-scaffold na na JBJUVP010000050.1 <> na Primary Assembly 218536 na HG04187#2#h2tg000120l unplaced-scaffold na na JBJUVP010000051.1 <> na Primary Assembly 71163 na HG04187#2#h2tg000122l unplaced-scaffold na na JBJUVP010000052.1 <> na Primary Assembly 53955 na HG04187#2#h2tg000126l unplaced-scaffold na na JBJUVP010000053.1 <> na Primary Assembly 66601 na HG04187#2#h2tg000001l unplaced-scaffold na na JBJUVP010000054.1 <> na Primary Assembly 112461981 na HG04187#2#h2tg000003l unplaced-scaffold na na JBJUVP010000056.1 <> na Primary Assembly 92080939 na HG04187#2#h2tg000004l unplaced-scaffold na na JBJUVP010000057.1 <> na Primary Assembly 90064254 na HG04187#2#h2tg000020l unplaced-scaffold na na JBJUVP010000060.1 <> na Primary Assembly 104041315 na HG04187#2#h2tg000026l unplaced-scaffold na na JBJUVP010000061.1 <> na Primary Assembly 52116966 na HG04187#2#h2tg000028l unplaced-scaffold na na JBJUVP010000062.1 <> na Primary Assembly 2205956 na HG04187#2#h2tg000029l unplaced-scaffold na na JBJUVP010000063.1 <> na Primary Assembly 3299107 na HG04187#2#h2tg000030l unplaced-scaffold na na JBJUVP010000064.1 <> na Primary Assembly 1082478 na HG04187#2#h2tg000031l unplaced-scaffold na na JBJUVP010000065.1 <> na Primary Assembly 3380766 na HG04187#2#h2tg000036l unplaced-scaffold na na JBJUVP010000066.1 <> na Primary Assembly 2967057 na HG04187#2#h2tg000038l unplaced-scaffold na na JBJUVP010000067.1 <> na Primary Assembly 484970 na HG04187#2#h2tg000041l unplaced-scaffold na na JBJUVP010000068.1 <> na Primary Assembly 241796 na HG04187#2#h2tg000042l unplaced-scaffold na na JBJUVP010000069.1 <> na Primary Assembly 81283 na HG04187#2#h2tg000046l unplaced-scaffold na na JBJUVP010000070.1 <> na Primary Assembly 107091 na HG04187#2#h2tg000051l unplaced-scaffold na na JBJUVP010000071.1 <> na Primary Assembly 92106 na HG04187#2#h2tg000054l unplaced-scaffold na na JBJUVP010000072.1 <> na Primary Assembly 518007 na HG04187#2#h2tg000060l unplaced-scaffold na na JBJUVP010000073.1 <> na Primary Assembly 186982 na HG04187#2#h2tg000061l unplaced-scaffold na na JBJUVP010000074.1 <> na Primary Assembly 125875 na HG04187#2#h2tg000062l unplaced-scaffold na na JBJUVP010000075.1 <> na Primary Assembly 118195 na HG04187#2#h2tg000063l unplaced-scaffold na na JBJUVP010000076.1 <> na Primary Assembly 326270 na HG04187#2#h2tg000065l unplaced-scaffold na na JBJUVP010000077.1 <> na Primary Assembly 147303 na HG04187#2#h2tg000072l unplaced-scaffold na na JBJUVP010000078.1 <> na Primary Assembly 67118 na HG04187#2#h2tg000073l unplaced-scaffold na na JBJUVP010000079.1 <> na Primary Assembly 101965 na HG04187#2#h2tg000075l unplaced-scaffold na na JBJUVP010000080.1 <> na Primary Assembly 123787 na HG04187#2#h2tg000077l unplaced-scaffold na na JBJUVP010000081.1 <> na Primary Assembly 55601 na HG04187#2#h2tg000078l unplaced-scaffold na na JBJUVP010000082.1 <> na Primary Assembly 287618 na HG04187#2#h2tg000081l unplaced-scaffold na na JBJUVP010000083.1 <> na Primary Assembly 131379 na HG04187#2#h2tg000082l unplaced-scaffold na na JBJUVP010000084.1 <> na Primary Assembly 148847 na HG04187#2#h2tg000088l unplaced-scaffold na na JBJUVP010000085.1 <> na Primary Assembly 71869 na HG04187#2#h2tg000096l unplaced-scaffold na na JBJUVP010000086.1 <> na Primary Assembly 83279 na HG04187#2#h2tg000098l unplaced-scaffold na na JBJUVP010000087.1 <> na Primary Assembly 71996 na HG04187#2#h2tg000103l unplaced-scaffold na na JBJUVP010000088.1 <> na Primary Assembly 121803 na HG04187#2#h2tg000107l unplaced-scaffold na na JBJUVP010000089.1 <> na Primary Assembly 89600 na HG04187#2#h2tg000108l unplaced-scaffold na na JBJUVP010000090.1 <> na Primary Assembly 55637 na HG04187#2#h2tg000109l unplaced-scaffold na na JBJUVP010000091.1 <> na Primary Assembly 144193 na HG04187#2#h2tg000110l unplaced-scaffold na na JBJUVP010000092.1 <> na Primary Assembly 71374 na HG04187#2#h2tg000115l unplaced-scaffold na na JBJUVP010000093.1 <> na Primary Assembly 95269 na HG04187#2#h2tg000116l unplaced-scaffold na na JBJUVP010000094.1 <> na Primary Assembly 98964 na HG04187#2#h2tg000123l unplaced-scaffold na na JBJUVP010000095.1 <> na Primary Assembly 74912 na HG04187#2#h2tg000124l unplaced-scaffold na na JBJUVP010000096.1 <> na Primary Assembly 55138 na HG04187#2#h2tg000125l unplaced-scaffold na na JBJUVP010000097.1 <> na Primary Assembly 82655 na HG04187#2#h2tg000127l unplaced-scaffold na na JBJUVP010000098.1 <> na Primary Assembly 102893 na HG04187#2#h2tg000128l unplaced-scaffold na na JBJUVP010000099.1 <> na Primary Assembly 85969 na HG04187#2#h2tg000131l unplaced-scaffold na na JBJUVP010000100.1 <> na Primary Assembly 95583 na HG04187#2#h2tg000133l unplaced-scaffold na na JBJUVP010000101.1 <> na Primary Assembly 104623 na HG04187#2#h2tg000134l unplaced-scaffold na na JBJUVP010000102.1 <> na Primary Assembly 65300 na HG04187#2#h2tg000136l unplaced-scaffold na na JBJUVP010000103.1 <> na Primary Assembly 73788 na HG04187#2#atg000001l_rotated unlocalized-scaffold MT Mitochondrion JBJUVP010000104.1 <> na non-nuclear 16569 na