# Assembly name: HG04187_pat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG04187 # Sex: male # Taxid: 9606 # BioSample: SAMN37706911 # BioProject: PRJNA1195140 # Submitter: UCSC Genomics Institute # Date: 2024-12-11 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBJUVO01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 66x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_046000115.1 # Linked assembly: GCA_045999925.1 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_046000125.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG04187#1#h1tg000012l assembled-molecule 1 Chromosome CM099739.1 <> na Primary Assembly 243075713 na HG04187#1#h1tg000002l assembled-molecule 2 Chromosome CM099740.1 <> na Primary Assembly 242552295 na HG04187#1#h1tg000019l assembled-molecule 5 Chromosome CM099741.1 <> na Primary Assembly 182744261 na HG04187#1#h1tg000013l assembled-molecule 6 Chromosome CM099742.1 <> na Primary Assembly 170787608 na HG04187#1#h1tg000005l assembled-molecule 7 Chromosome CM099743.1 <> na Primary Assembly 161556452 na HG04187#1#h1tg000006l assembled-molecule 8 Chromosome CM099744.1 <> na Primary Assembly 145790875 na HG04187#1#h1tg000008l assembled-molecule 9 Chromosome CM099745.1 <> na Primary Assembly 136474558 na HG04187#1#h1tg000020l assembled-molecule 10 Chromosome CM099746.1 <> na Primary Assembly 134243304 na HG04187#1#h1tg000011l assembled-molecule 11 Chromosome CM099747.1 <> na Primary Assembly 138394246 na HG04187#1#h1tg000015l assembled-molecule 12 Chromosome CM099748.1 <> na Primary Assembly 134837978 na HG04187#1#h1tg000023l assembled-molecule 16 Chromosome CM099749.1 <> na Primary Assembly 90979939 na HG04187#1#h1tg000024l assembled-molecule 17 Chromosome CM099750.1 <> na Primary Assembly 82774873 na HG04187#1#h1tg000021l assembled-molecule 18 Chromosome CM099751.1 <> na Primary Assembly 80046313 na HG04187#1#h1tg000007l assembled-molecule 19 Chromosome CM099752.1 <> na Primary Assembly 61821588 na HG04187#1#h1tg000001l unplaced-scaffold na na JBJUVO010000001.1 <> na Primary Assembly 102470836 na HG04187#1#h1tg000010l unplaced-scaffold na na JBJUVO010000005.1 <> na Primary Assembly 95911588 na HG04187#1#h1tg000016l unplaced-scaffold na na JBJUVO010000008.1 <> na Primary Assembly 91620654 na HG04187#1#h1tg000017l unplaced-scaffold na na JBJUVO010000009.1 <> na Primary Assembly 45721809 na HG04187#1#h1tg000022l-2 unplaced-scaffold na na JBJUVO010000011.1 <> na Primary Assembly 66201570 na HG04187#1#h1tg000025l unplaced-scaffold na na JBJUVO010000013.1 <> na Primary Assembly 39879531 na HG04187#1#h1tg000030l unplaced-scaffold na na JBJUVO010000014.1 <> na Primary Assembly 3479875 na HG04187#1#h1tg000032l unplaced-scaffold na na JBJUVO010000015.1 <> na Primary Assembly 372409 na HG04187#1#h1tg000033l unplaced-scaffold na na JBJUVO010000016.1 <> na Primary Assembly 219127 na HG04187#1#h1tg000037l unplaced-scaffold na na JBJUVO010000017.1 <> na Primary Assembly 209274 na HG04187#1#h1tg000038l unplaced-scaffold na na JBJUVO010000018.1 <> na Primary Assembly 328424 na HG04187#1#h1tg000040l unplaced-scaffold na na JBJUVO010000019.1 <> na Primary Assembly 222878 na HG04187#1#h1tg000042l unplaced-scaffold na na JBJUVO010000020.1 <> na Primary Assembly 372286 na HG04187#1#h1tg000044l unplaced-scaffold na na JBJUVO010000021.1 <> na Primary Assembly 349894 na HG04187#1#h1tg000045l unplaced-scaffold na na JBJUVO010000022.1 <> na Primary Assembly 86070 na HG04187#1#h1tg000046l unplaced-scaffold na na JBJUVO010000023.1 <> na Primary Assembly 1169720 na HG04187#1#h1tg000047l unplaced-scaffold na na JBJUVO010000024.1 <> na Primary Assembly 139214 na HG04187#1#h1tg000050l unplaced-scaffold na na JBJUVO010000025.1 <> na Primary Assembly 197949 na HG04187#1#h1tg000051l unplaced-scaffold na na JBJUVO010000026.1 <> na Primary Assembly 542459 na HG04187#1#h1tg000052l unplaced-scaffold na na JBJUVO010000027.1 <> na Primary Assembly 864946 na HG04187#1#h1tg000054l unplaced-scaffold na na JBJUVO010000028.1 <> na Primary Assembly 270880 na HG04187#1#h1tg000057l unplaced-scaffold na na JBJUVO010000029.1 <> na Primary Assembly 107415 na HG04187#1#h1tg000058l unplaced-scaffold na na JBJUVO010000030.1 <> na Primary Assembly 193527 na HG04187#1#h1tg000059l unplaced-scaffold na na JBJUVO010000031.1 <> na Primary Assembly 190092 na HG04187#1#h1tg000062l unplaced-scaffold na na JBJUVO010000032.1 <> na Primary Assembly 143151 na HG04187#1#h1tg000063l unplaced-scaffold na na JBJUVO010000033.1 <> na Primary Assembly 167774 na HG04187#1#h1tg000067l unplaced-scaffold na na JBJUVO010000034.1 <> na Primary Assembly 88570 na HG04187#1#h1tg000073l unplaced-scaffold na na JBJUVO010000035.1 <> na Primary Assembly 191315 na HG04187#1#h1tg000074l unplaced-scaffold na na JBJUVO010000036.1 <> na Primary Assembly 414161 na HG04187#1#h1tg000077l unplaced-scaffold na na JBJUVO010000037.1 <> na Primary Assembly 72744 na HG04187#1#h1tg000084l unplaced-scaffold na na JBJUVO010000038.1 <> na Primary Assembly 148140 na HG04187#1#h1tg000085l unplaced-scaffold na na JBJUVO010000039.1 <> na Primary Assembly 112246 na HG04187#1#h1tg000086l unplaced-scaffold na na JBJUVO010000040.1 <> na Primary Assembly 58363 na HG04187#1#h1tg000094l unplaced-scaffold na na JBJUVO010000041.1 <> na Primary Assembly 94690 na HG04187#1#h1tg000096l unplaced-scaffold na na JBJUVO010000042.1 <> na Primary Assembly 63276 na HG04187#1#h1tg000097l unplaced-scaffold na na JBJUVO010000043.1 <> na Primary Assembly 61197 na HG04187#1#h1tg000100l unplaced-scaffold na na JBJUVO010000044.1 <> na Primary Assembly 56741 na HG04187#1#h1tg000114l unplaced-scaffold na na JBJUVO010000045.1 <> na Primary Assembly 50462 na HG04187#1#h1tg000118l unplaced-scaffold na na JBJUVO010000046.1 <> na Primary Assembly 97847 na HG04187#1#h1tg000123l unplaced-scaffold na na JBJUVO010000047.1 <> na Primary Assembly 53486 na HG04187#1#h1tg000129l unplaced-scaffold na na JBJUVO010000048.1 <> na Primary Assembly 98526 na HG04187#1#h1tg000133l unplaced-scaffold na na JBJUVO010000049.1 <> na Primary Assembly 61418 na HG04187#1#h1tg000134l unplaced-scaffold na na JBJUVO010000050.1 <> na Primary Assembly 72959 na HG04187#1#h1tg000136l unplaced-scaffold na na JBJUVO010000051.1 <> na Primary Assembly 83402 na HG04187#1#h1tg000145l unplaced-scaffold na na JBJUVO010000052.1 <> na Primary Assembly 55932 na HG04187#1#h1tg000003l unplaced-scaffold na na JBJUVO010000053.1 <> na Primary Assembly 108120707 na HG04187#1#h1tg000004l unplaced-scaffold na na JBJUVO010000054.1 <> na Primary Assembly 10646345 na HG04187#1#h1tg000009l unplaced-scaffold na na JBJUVO010000057.1 <> na Primary Assembly 92876346 na HG04187#1#h1tg000014l unplaced-scaffold na na JBJUVO010000060.1 <> na Primary Assembly 190047712 na HG04187#1#h1tg000018l unplaced-scaffold na na JBJUVO010000061.1 <> na Primary Assembly 3226328 na HG04187#1#h1tg000022l-1 unplaced-scaffold na na JBJUVO010000064.1 <> na Primary Assembly 19764454 na HG04187#1#h1tg000026l unplaced-scaffold na na JBJUVO010000066.1 <> na Primary Assembly 12675298 na HG04187#1#h1tg000027l unplaced-scaffold na na JBJUVO010000067.1 <> na Primary Assembly 3351182 na HG04187#1#h1tg000028l unplaced-scaffold na na JBJUVO010000068.1 <> na Primary Assembly 1286519 na HG04187#1#h1tg000029l unplaced-scaffold na na JBJUVO010000069.1 <> na Primary Assembly 65673 na HG04187#1#h1tg000031l unplaced-scaffold na na JBJUVO010000070.1 <> na Primary Assembly 3303851 na HG04187#1#h1tg000034l unplaced-scaffold na na JBJUVO010000071.1 <> na Primary Assembly 1085165 na HG04187#1#h1tg000035l unplaced-scaffold na na JBJUVO010000072.1 <> na Primary Assembly 228749 na HG04187#1#h1tg000036l unplaced-scaffold na na JBJUVO010000073.1 <> na Primary Assembly 305433 na HG04187#1#h1tg000039l unplaced-scaffold na na JBJUVO010000074.1 <> na Primary Assembly 177533 na HG04187#1#h1tg000041l unplaced-scaffold na na JBJUVO010000075.1 <> na Primary Assembly 2260303 na HG04187#1#h1tg000043l unplaced-scaffold na na JBJUVO010000076.1 <> na Primary Assembly 2174630 na HG04187#1#h1tg000049l unplaced-scaffold na na JBJUVO010000077.1 <> na Primary Assembly 165142 na HG04187#1#h1tg000053l unplaced-scaffold na na JBJUVO010000078.1 <> na Primary Assembly 86853 na HG04187#1#h1tg000055l unplaced-scaffold na na JBJUVO010000079.1 <> na Primary Assembly 336358 na HG04187#1#h1tg000060l unplaced-scaffold na na JBJUVO010000080.1 <> na Primary Assembly 306825 na HG04187#1#h1tg000061l unplaced-scaffold na na JBJUVO010000081.1 <> na Primary Assembly 58215 na HG04187#1#h1tg000064l unplaced-scaffold na na JBJUVO010000082.1 <> na Primary Assembly 304089 na HG04187#1#h1tg000066l unplaced-scaffold na na JBJUVO010000083.1 <> na Primary Assembly 130169 na HG04187#1#h1tg000068l unplaced-scaffold na na JBJUVO010000084.1 <> na Primary Assembly 172755 na HG04187#1#h1tg000070l unplaced-scaffold na na JBJUVO010000085.1 <> na Primary Assembly 50562 na HG04187#1#h1tg000072l unplaced-scaffold na na JBJUVO010000086.1 <> na Primary Assembly 189144 na HG04187#1#h1tg000075l unplaced-scaffold na na JBJUVO010000087.1 <> na Primary Assembly 128226 na HG04187#1#h1tg000078l unplaced-scaffold na na JBJUVO010000088.1 <> na Primary Assembly 518707 na HG04187#1#h1tg000079l unplaced-scaffold na na JBJUVO010000089.1 <> na Primary Assembly 287618 na HG04187#1#h1tg000080l unplaced-scaffold na na JBJUVO010000090.1 <> na Primary Assembly 206186 na HG04187#1#h1tg000087l unplaced-scaffold na na JBJUVO010000091.1 <> na Primary Assembly 217032 na HG04187#1#h1tg000089l unplaced-scaffold na na JBJUVO010000092.1 <> na Primary Assembly 78383 na HG04187#1#h1tg000092l unplaced-scaffold na na JBJUVO010000093.1 <> na Primary Assembly 75373 na HG04187#1#h1tg000093l unplaced-scaffold na na JBJUVO010000094.1 <> na Primary Assembly 157666 na HG04187#1#h1tg000095l unplaced-scaffold na na JBJUVO010000095.1 <> na Primary Assembly 250292 na HG04187#1#h1tg000099l unplaced-scaffold na na JBJUVO010000096.1 <> na Primary Assembly 66499 na HG04187#1#h1tg000102l unplaced-scaffold na na JBJUVO010000097.1 <> na Primary Assembly 63209 na HG04187#1#h1tg000106l unplaced-scaffold na na JBJUVO010000098.1 <> na Primary Assembly 200368 na HG04187#1#h1tg000107l unplaced-scaffold na na JBJUVO010000099.1 <> na Primary Assembly 107510 na HG04187#1#h1tg000109l unplaced-scaffold na na JBJUVO010000100.1 <> na Primary Assembly 53567 na HG04187#1#h1tg000110l unplaced-scaffold na na JBJUVO010000101.1 <> na Primary Assembly 97641 na HG04187#1#h1tg000113l unplaced-scaffold na na JBJUVO010000102.1 <> na Primary Assembly 91121 na HG04187#1#h1tg000115l unplaced-scaffold na na JBJUVO010000103.1 <> na Primary Assembly 63000 na HG04187#1#h1tg000117l unplaced-scaffold na na JBJUVO010000104.1 <> na Primary Assembly 146109 na HG04187#1#h1tg000119l unplaced-scaffold na na JBJUVO010000105.1 <> na Primary Assembly 69671 na HG04187#1#h1tg000121l unplaced-scaffold na na JBJUVO010000106.1 <> na Primary Assembly 71211 na HG04187#1#h1tg000126l unplaced-scaffold na na JBJUVO010000107.1 <> na Primary Assembly 76242 na HG04187#1#h1tg000128l unplaced-scaffold na na JBJUVO010000108.1 <> na Primary Assembly 168653 na HG04187#1#h1tg000130l unplaced-scaffold na na JBJUVO010000109.1 <> na Primary Assembly 63471 na HG04187#1#h1tg000137l unplaced-scaffold na na JBJUVO010000110.1 <> na Primary Assembly 66104 na HG04187#1#h1tg000139l unplaced-scaffold na na JBJUVO010000111.1 <> na Primary Assembly 62981 na HG04187#1#h1tg000143l unplaced-scaffold na na JBJUVO010000112.1 <> na Primary Assembly 72152 na