# Assembly name:  Tmue_2.0
# Organism name:  Tokudaia muenninki (Okinawa island spiny rat)
# Isolate:  P-3
# Taxid:          742503
# BioSample:      SAMD00634148
# BioProject:     PRJDB16323
# Submitter:      Hokkaido University, Graduate School of Life Science
# Date:           2024-11-30
# Assembly type:  haploid
# Release type:   major
# Assembly level: Scaffold
# Genome representation: full
# WGS project:    BAAFZZ01
# Assembly method: hifiasm v. 0.19.8; 3D_DNA v. 180922
# Genome coverage: 100x
# Sequencing technology: PacBio Sequel II; Revio; Illumina NovaSeq6000
# RefSeq category: Reference Genome
# GenBank assembly accession: GCA_047150545.1
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_047150555.1		Primary Assembly
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
chr01	unplaced-scaffold	na	na	BAAFZZ010000001.1	<>	na	Primary Assembly	293097053	na
chr02	unplaced-scaffold	na	na	BAAFZZ010000002.1	<>	na	Primary Assembly	297916432	na
chr03	unplaced-scaffold	na	na	BAAFZZ010000003.1	<>	na	Primary Assembly	243664890	na
chr04	unplaced-scaffold	na	na	BAAFZZ010000004.1	<>	na	Primary Assembly	179340188	na
chr05	unplaced-scaffold	na	na	BAAFZZ010000005.1	<>	na	Primary Assembly	261967851	na
chr06	unplaced-scaffold	na	na	BAAFZZ010000006.1	<>	na	Primary Assembly	188866913	na
chr07	unplaced-scaffold	na	na	BAAFZZ010000007.1	<>	na	Primary Assembly	158721324	na
chr08	unplaced-scaffold	na	na	BAAFZZ010000008.1	<>	na	Primary Assembly	138437150	na
chr09	unplaced-scaffold	na	na	BAAFZZ010000009.1	<>	na	Primary Assembly	160313991	na
chr10	unplaced-scaffold	na	na	BAAFZZ010000010.1	<>	na	Primary Assembly	123727036	na
chr11	unplaced-scaffold	na	na	BAAFZZ010000011.1	<>	na	Primary Assembly	128733504	na
chr12	unplaced-scaffold	na	na	BAAFZZ010000012.1	<>	na	Primary Assembly	62188781	na
chr13	unplaced-scaffold	na	na	BAAFZZ010000013.1	<>	na	Primary Assembly	121118470	na
chr14	unplaced-scaffold	na	na	BAAFZZ010000014.1	<>	na	Primary Assembly	107047090	na
chr15	unplaced-scaffold	na	na	BAAFZZ010000015.1	<>	na	Primary Assembly	91839599	na
chr16	unplaced-scaffold	na	na	BAAFZZ010000016.1	<>	na	Primary Assembly	136141326	na
chr17	unplaced-scaffold	na	na	BAAFZZ010000017.1	<>	na	Primary Assembly	81143605	na
chr18	unplaced-scaffold	na	na	BAAFZZ010000018.1	<>	na	Primary Assembly	78421374	na
chr19	unplaced-scaffold	na	na	BAAFZZ010000019.1	<>	na	Primary Assembly	68494226	na
chr20	unplaced-scaffold	na	na	BAAFZZ010000020.1	<>	na	Primary Assembly	71293587	na
chr21	unplaced-scaffold	na	na	BAAFZZ010000021.1	<>	na	Primary Assembly	140751371	na
neo-ancX	unplaced-scaffold	na	na	BAAFZZ010000022.1	<>	na	Primary Assembly	346715556	na
neoY-ancY	unplaced-scaffold	na	na	BAAFZZ010000023.1	<>	na	Primary Assembly	171451252	na
Un01	unplaced-scaffold	na	na	BAAFZZ010000024.1	<>	na	Primary Assembly	9228424	na
Un02	unplaced-scaffold	na	na	BAAFZZ010000025.1	<>	na	Primary Assembly	5779208	na
Un03	unplaced-scaffold	na	na	BAAFZZ010000026.1	<>	na	Primary Assembly	4465333	na
Un04	unplaced-scaffold	na	na	BAAFZZ010000027.1	<>	na	Primary Assembly	1160603	na
Un05	unplaced-scaffold	na	na	BAAFZZ010000028.1	<>	na	Primary Assembly	798968	na
Un06	unplaced-scaffold	na	na	BAAFZZ010000029.1	<>	na	Primary Assembly	574922	na
Un07	unplaced-scaffold	na	na	BAAFZZ010000030.1	<>	na	Primary Assembly	321849	na
Un08	unplaced-scaffold	na	na	BAAFZZ010000031.1	<>	na	Primary Assembly	294322	na
Un09	unplaced-scaffold	na	na	BAAFZZ010000032.1	<>	na	Primary Assembly	227723	na
Un10	unplaced-scaffold	na	na	BAAFZZ010000033.1	<>	na	Primary Assembly	189876	na
Un11	unplaced-scaffold	na	na	BAAFZZ010000034.1	<>	na	Primary Assembly	152197	na