# Assembly name: fCoiMys1.hap1 # Organism name: Coilia mystus (Osbeck's grenadier anchovy) # Infraspecific name: ecotype=Shantou # Isolate: fCoiMys1 # Sex: female # Taxid: 286537 # BioSample: SAMN46980313 # BioProject: PRJNA1229001 # Submitter: University of Copenhagen # Date: 2025-03-11 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBLZWN01 # Assembly method: hifiasm v. 0.19.9; purge_dups v. 1.2.5; arima_mapping_pipeline v. 2019-08-02; yahs v. 1.2a.1 # Expected final version: yes # Genome coverage: 47.3x # Sequencing technology: PacBio HiFi; Hi-C # GenBank assembly accession: GCA_048544215.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_048544275.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_1 assembled-molecule 1 Chromosome CM108860.1 <> na Primary Assembly 38399463 na scaffold_6 assembled-molecule 2 Chromosome CM108861.1 <> na Primary Assembly 36481769 na scaffold_4 assembled-molecule 3 Chromosome CM108862.1 <> na Primary Assembly 36253457 na scaffold_2 assembled-molecule 4 Chromosome CM108863.1 <> na Primary Assembly 36901382 na scaffold_8 assembled-molecule 5 Chromosome CM108864.1 <> na Primary Assembly 35700262 na scaffold_5 assembled-molecule 6 Chromosome CM108865.1 <> na Primary Assembly 36112000 na scaffold_3 assembled-molecule 7 Chromosome CM108866.1 <> na Primary Assembly 37173539 na scaffold_12 assembled-molecule 8 Chromosome CM108867.1 <> na Primary Assembly 35843784 na scaffold_7 assembled-molecule 9 Chromosome CM108868.1 <> na Primary Assembly 35821743 na scaffold_9 assembled-molecule 10 Chromosome CM108869.1 <> na Primary Assembly 34557785 na scaffold_17 assembled-molecule 11 Chromosome CM108870.1 <> na Primary Assembly 34963122 na scaffold_21 assembled-molecule 12 Chromosome CM108871.1 <> na Primary Assembly 35472514 na scaffold_14 assembled-molecule 13 Chromosome CM108872.1 <> na Primary Assembly 34078795 na scaffold_11 assembled-molecule 14 Chromosome CM108873.1 <> na Primary Assembly 34363378 na scaffold_19 assembled-molecule 15 Chromosome CM108874.1 <> na Primary Assembly 34204527 na scaffold_10 assembled-molecule 16 Chromosome CM108875.1 <> na Primary Assembly 34364919 na scaffold_16 assembled-molecule 17 Chromosome CM108876.1 <> na Primary Assembly 33774322 na scaffold_13 assembled-molecule 18 Chromosome CM108877.1 <> na Primary Assembly 34019532 na scaffold_15 assembled-molecule 19 Chromosome CM108878.1 <> na Primary Assembly 33176658 na scaffold_20 assembled-molecule 20 Chromosome CM108879.1 <> na Primary Assembly 31533491 na scaffold_23 assembled-molecule 21 Chromosome CM108880.1 <> na Primary Assembly 29459922 na scaffold_22 assembled-molecule 22 Chromosome CM108881.1 <> na Primary Assembly 29873237 na scaffold_18 assembled-molecule 23 Chromosome CM108882.1 <> na Primary Assembly 32330434 na scaffold_173 unplaced-scaffold na na JBLZWN010000001.1 <> na Primary Assembly 71167 na scaffold_154 unplaced-scaffold na na JBLZWN010000002.1 <> na Primary Assembly 85983 na scaffold_143 unplaced-scaffold na na JBLZWN010000003.1 <> na Primary Assembly 1000 na scaffold_151 unplaced-scaffold na na JBLZWN010000004.1 <> na Primary Assembly 118000 na scaffold_160 unplaced-scaffold na na JBLZWN010000005.1 <> na Primary Assembly 67124 na scaffold_138 unplaced-scaffold na na JBLZWN010000006.1 <> na Primary Assembly 1000 na scaffold_68 unplaced-scaffold na na JBLZWN010000007.1 <> na Primary Assembly 35172 na scaffold_119 unplaced-scaffold na na JBLZWN010000008.1 <> na Primary Assembly 2000 na scaffold_111 unplaced-scaffold na na JBLZWN010000009.1 <> na Primary Assembly 19871 na scaffold_136 unplaced-scaffold na na JBLZWN010000010.1 <> na Primary Assembly 1000 na scaffold_32 unplaced-scaffold na na JBLZWN010000011.1 <> na Primary Assembly 54152 na scaffold_163 unplaced-scaffold na na JBLZWN010000012.1 <> na Primary Assembly 53733 na scaffold_89 unplaced-scaffold na na JBLZWN010000013.1 <> na Primary Assembly 96072 na scaffold_140 unplaced-scaffold na na JBLZWN010000015.1 <> na Primary Assembly 1000 na scaffold_159 unplaced-scaffold na na JBLZWN010000016.1 <> na Primary Assembly 67676 na scaffold_98 unplaced-scaffold na na JBLZWN010000017.1 <> na Primary Assembly 26779 na scaffold_100 unplaced-scaffold na na JBLZWN010000018.1 <> na Primary Assembly 26417 na scaffold_59 unplaced-scaffold na na JBLZWN010000019.1 <> na Primary Assembly 38013 na scaffold_170 unplaced-scaffold na na JBLZWN010000021.1 <> na Primary Assembly 58842 na scaffold_50 unplaced-scaffold na na JBLZWN010000022.1 <> na Primary Assembly 41415 na scaffold_48 unplaced-scaffold na na JBLZWN010000023.1 <> na Primary Assembly 42039 na scaffold_167 unplaced-scaffold na na JBLZWN010000024.1 <> na Primary Assembly 50000 na scaffold_57 unplaced-scaffold na na JBLZWN010000025.1 <> na Primary Assembly 39153 na scaffold_54 unplaced-scaffold na na JBLZWN010000026.1 <> na Primary Assembly 40724 na scaffold_87 unplaced-scaffold na na JBLZWN010000027.1 <> na Primary Assembly 95575 na scaffold_128 unplaced-scaffold na na JBLZWN010000028.1 <> na Primary Assembly 1000 na scaffold_80 unplaced-scaffold na na JBLZWN010000030.1 <> na Primary Assembly 27228 na scaffold_84 unplaced-scaffold na na JBLZWN010000031.1 <> na Primary Assembly 374339 na scaffold_147 unplaced-scaffold na na JBLZWN010000032.1 <> na Primary Assembly 209798 na scaffold_126 unplaced-scaffold na na JBLZWN010000033.1 <> na Primary Assembly 1000 na scaffold_33 unplaced-scaffold na na JBLZWN010000034.1 <> na Primary Assembly 52625 na scaffold_107 unplaced-scaffold na na JBLZWN010000035.1 <> na Primary Assembly 23644 na scaffold_56 unplaced-scaffold na na JBLZWN010000036.1 <> na Primary Assembly 39682 na scaffold_177 unplaced-scaffold na na JBLZWN010000037.1 <> na Primary Assembly 46787 na scaffold_78 unplaced-scaffold na na JBLZWN010000038.1 <> na Primary Assembly 29434 na scaffold_182 unplaced-scaffold na na JBLZWN010000039.1 <> na Primary Assembly 40611 na scaffold_86 unplaced-scaffold na na JBLZWN010000040.1 <> na Primary Assembly 94944 na scaffold_25 unplaced-scaffold na na JBLZWN010000041.1 <> na Primary Assembly 66749 na scaffold_62 unplaced-scaffold na na JBLZWN010000042.1 <> na Primary Assembly 37277 na scaffold_85 unplaced-scaffold na na JBLZWN010000043.1 <> na Primary Assembly 194804 na scaffold_26 unplaced-scaffold na na JBLZWN010000044.1 <> na Primary Assembly 65333 na scaffold_43 unplaced-scaffold na na JBLZWN010000045.1 <> na Primary Assembly 44413 na scaffold_117 unplaced-scaffold na na JBLZWN010000046.1 <> na Primary Assembly 4000 na scaffold_55 unplaced-scaffold na na JBLZWN010000047.1 <> na Primary Assembly 40174 na scaffold_73 unplaced-scaffold na na JBLZWN010000048.1 <> na Primary Assembly 33009 na scaffold_132 unplaced-scaffold na na JBLZWN010000049.1 <> na Primary Assembly 1000 na scaffold_81 unplaced-scaffold na na JBLZWN010000051.1 <> na Primary Assembly 27043 na scaffold_135 unplaced-scaffold na na JBLZWN010000052.1 <> na Primary Assembly 1000 na scaffold_27 unplaced-scaffold na na JBLZWN010000053.1 <> na Primary Assembly 64489 na scaffold_24 unplaced-scaffold na na JBLZWN010000054.1 <> na Primary Assembly 75476 na scaffold_92 unplaced-scaffold na na JBLZWN010000055.1 <> na Primary Assembly 82024 na scaffold_157 unplaced-scaffold na na JBLZWN010000056.1 <> na Primary Assembly 74388 na scaffold_51 unplaced-scaffold na na JBLZWN010000058.1 <> na Primary Assembly 41407 na scaffold_38 unplaced-scaffold na na JBLZWN010000059.1 <> na Primary Assembly 48002 na scaffold_169 unplaced-scaffold na na JBLZWN010000060.1 <> na Primary Assembly 51175 na scaffold_63 unplaced-scaffold na na JBLZWN010000061.1 <> na Primary Assembly 36593 na scaffold_110 unplaced-scaffold na na JBLZWN010000063.1 <> na Primary Assembly 21852 na scaffold_171 unplaced-scaffold na na JBLZWN010000064.1 <> na Primary Assembly 36666 na scaffold_174 unplaced-scaffold na na JBLZWN010000065.1 <> na Primary Assembly 69415 na scaffold_104 unplaced-scaffold na na JBLZWN010000066.1 <> na Primary Assembly 24881 na scaffold_101 unplaced-scaffold na na JBLZWN010000067.1 <> na Primary Assembly 26170 na scaffold_29 unplaced-scaffold na na JBLZWN010000068.1 <> na Primary Assembly 59551 na scaffold_42 unplaced-scaffold na na JBLZWN010000069.1 <> na Primary Assembly 44728 na scaffold_144 unplaced-scaffold na na JBLZWN010000071.1 <> na Primary Assembly 1000 na scaffold_153 unplaced-scaffold na na JBLZWN010000072.1 <> na Primary Assembly 97682 na scaffold_141 unplaced-scaffold na na JBLZWN010000073.1 <> na Primary Assembly 1000 na scaffold_149 unplaced-scaffold na na JBLZWN010000074.1 <> na Primary Assembly 195290 na scaffold_125 unplaced-scaffold na na JBLZWN010000075.1 <> na Primary Assembly 2000 na scaffold_122 unplaced-scaffold na na JBLZWN010000076.1 <> na Primary Assembly 2000 na scaffold_72 unplaced-scaffold na na JBLZWN010000077.1 <> na Primary Assembly 34110 na scaffold_150 unplaced-scaffold na na JBLZWN010000078.1 <> na Primary Assembly 165605 na scaffold_109 unplaced-scaffold na na JBLZWN010000079.1 <> na Primary Assembly 22065 na scaffold_93 unplaced-scaffold na na JBLZWN010000080.1 <> na Primary Assembly 81118 na scaffold_179 unplaced-scaffold na na JBLZWN010000081.1 <> na Primary Assembly 75295 na scaffold_113 unplaced-scaffold na na JBLZWN010000082.1 <> na Primary Assembly 18783 na scaffold_161 unplaced-scaffold na na JBLZWN010000084.1 <> na Primary Assembly 72000 na scaffold_164 unplaced-scaffold na na JBLZWN010000085.1 <> na Primary Assembly 53343 na scaffold_88 unplaced-scaffold na na JBLZWN010000086.1 <> na Primary Assembly 113106 na scaffold_162 unplaced-scaffold na na JBLZWN010000088.1 <> na Primary Assembly 54000 na scaffold_76 unplaced-scaffold na na JBLZWN010000089.1 <> na Primary Assembly 30560 na scaffold_165 unplaced-scaffold na na JBLZWN010000090.1 <> na Primary Assembly 57965 na scaffold_47 unplaced-scaffold na na JBLZWN010000091.1 <> na Primary Assembly 42902 na scaffold_40 unplaced-scaffold na na JBLZWN010000092.1 <> na Primary Assembly 44973 na scaffold_58 unplaced-scaffold na na JBLZWN010000093.1 <> na Primary Assembly 38525 na scaffold_124 unplaced-scaffold na na JBLZWN010000094.1 <> na Primary Assembly 2000 na scaffold_99 unplaced-scaffold na na JBLZWN010000095.1 <> na Primary Assembly 26689 na scaffold_121 unplaced-scaffold na na JBLZWN010000096.1 <> na Primary Assembly 2000 na scaffold_31 unplaced-scaffold na na JBLZWN010000097.1 <> na Primary Assembly 55006 na scaffold_44 unplaced-scaffold na na JBLZWN010000098.1 <> na Primary Assembly 43729 na scaffold_129 unplaced-scaffold na na JBLZWN010000099.1 <> na Primary Assembly 1000 na scaffold_145 unplaced-scaffold na na JBLZWN010000100.1 <> na Primary Assembly 267572 na scaffold_142 unplaced-scaffold na na JBLZWN010000101.1 <> na Primary Assembly 1000 na scaffold_74 unplaced-scaffold na na JBLZWN010000102.1 <> na Primary Assembly 32728 na scaffold_77 unplaced-scaffold na na JBLZWN010000103.1 <> na Primary Assembly 29673 na scaffold_172 unplaced-scaffold na na JBLZWN010000104.1 <> na Primary Assembly 29090 na scaffold_175 unplaced-scaffold na na JBLZWN010000105.1 <> na Primary Assembly 74491 na scaffold_105 unplaced-scaffold na na JBLZWN010000106.1 <> na Primary Assembly 24565 na scaffold_102 unplaced-scaffold na na JBLZWN010000107.1 <> na Primary Assembly 26020 na scaffold_70 unplaced-scaffold na na JBLZWN010000109.1 <> na Primary Assembly 35008 na scaffold_35 unplaced-scaffold na na JBLZWN010000110.1 <> na Primary Assembly 51176 na scaffold_69 unplaced-scaffold na na JBLZWN010000111.1 <> na Primary Assembly 35128 na scaffold_46 unplaced-scaffold na na JBLZWN010000112.1 <> na Primary Assembly 43672 na scaffold_64 unplaced-scaffold na na JBLZWN010000113.1 <> na Primary Assembly 36591 na scaffold_158 unplaced-scaffold na na JBLZWN010000114.1 <> na Primary Assembly 69000 na scaffold_67 unplaced-scaffold na na JBLZWN010000115.1 <> na Primary Assembly 35689 na scaffold_96 unplaced-scaffold na na JBLZWN010000116.1 <> na Primary Assembly 78891 na scaffold_60 unplaced-scaffold na na JBLZWN010000117.1 <> na Primary Assembly 37306 na scaffold_79 unplaced-scaffold na na JBLZWN010000119.1 <> na Primary Assembly 27626 na scaffold_131 unplaced-scaffold na na JBLZWN010000120.1 <> na Primary Assembly 1000 na scaffold_134 unplaced-scaffold na na JBLZWN010000121.1 <> na Primary Assembly 1000 na scaffold_116 unplaced-scaffold na na JBLZWN010000122.1 <> na Primary Assembly 14279 na scaffold_90 unplaced-scaffold na na JBLZWN010000123.1 <> na Primary Assembly 94891 na scaffold_66 unplaced-scaffold na na JBLZWN010000124.1 <> na Primary Assembly 35763 na scaffold_97 unplaced-scaffold na na JBLZWN010000125.1 <> na Primary Assembly 78032 na scaffold_139 unplaced-scaffold na na JBLZWN010000126.1 <> na Primary Assembly 1000 na scaffold_94 unplaced-scaffold na na JBLZWN010000127.1 <> na Primary Assembly 80263 na scaffold_118 unplaced-scaffold na na JBLZWN010000128.1 <> na Primary Assembly 3000 na scaffold_49 unplaced-scaffold na na JBLZWN010000129.1 <> na Primary Assembly 41878 na scaffold_180 unplaced-scaffold na na JBLZWN010000131.1 <> na Primary Assembly 75865 na scaffold_156 unplaced-scaffold na na JBLZWN010000134.1 <> na Primary Assembly 83909 na scaffold_181 unplaced-scaffold na na JBLZWN010000137.1 <> na Primary Assembly 88003 na scaffold_166 unplaced-scaffold na na JBLZWN010000138.1 <> na Primary Assembly 52026 na scaffold_52 unplaced-scaffold na na JBLZWN010000141.1 <> na Primary Assembly 40882 na scaffold_133 unplaced-scaffold na na JBLZWN010000142.1 <> na Primary Assembly 1000 na scaffold_65 unplaced-scaffold na na JBLZWN010000143.1 <> na Primary Assembly 35805 na scaffold_148 unplaced-scaffold na na JBLZWN010000144.1 <> na Primary Assembly 209000 na scaffold_39 unplaced-scaffold na na JBLZWN010000145.1 <> na Primary Assembly 47442 na scaffold_91 unplaced-scaffold na na JBLZWN010000146.1 <> na Primary Assembly 85449 na scaffold_108 unplaced-scaffold na na JBLZWN010000147.1 <> na Primary Assembly 22408 na scaffold_82 unplaced-scaffold na na JBLZWN010000148.1 <> na Primary Assembly 104605 na scaffold_178 unplaced-scaffold na na JBLZWN010000149.1 <> na Primary Assembly 211076 na scaffold_146 unplaced-scaffold na na JBLZWN010000150.1 <> na Primary Assembly 216183 na scaffold_127 unplaced-scaffold na na JBLZWN010000151.1 <> na Primary Assembly 1000 na scaffold_106 unplaced-scaffold na na JBLZWN010000153.1 <> na Primary Assembly 23763 na scaffold_176 unplaced-scaffold na na JBLZWN010000154.1 <> na Primary Assembly 64957 na scaffold_168 unplaced-scaffold na na JBLZWN010000155.1 <> na Primary Assembly 50000 na scaffold_130 unplaced-scaffold na na JBLZWN010000157.1 <> na Primary Assembly 1000 na scaffold_61 unplaced-scaffold na na JBLZWN010000158.1 <> na Primary Assembly 37298 na scaffold_95 unplaced-scaffold na na JBLZWN010000159.1 <> na Primary Assembly 79311 na scaffold_36 unplaced-scaffold na na JBLZWN010000160.1 <> na Primary Assembly 50819 na scaffold_45 unplaced-scaffold na na JBLZWN010000161.1 <> na Primary Assembly 43681 na scaffold_123 unplaced-scaffold na na JBLZWN010000162.1 <> na Primary Assembly 2000 na scaffold_53 unplaced-scaffold na na JBLZWN010000163.1 <> na Primary Assembly 40800 na scaffold_83 unplaced-scaffold na na JBLZWN010000165.1 <> na Primary Assembly 59796 na scaffold_115 unplaced-scaffold na na JBLZWN010000166.1 <> na Primary Assembly 17516 na scaffold_112 unplaced-scaffold na na JBLZWN010000167.1 <> na Primary Assembly 19621 na scaffold_71 unplaced-scaffold na na JBLZWN010000168.1 <> na Primary Assembly 34295 na scaffold_34 unplaced-scaffold na na JBLZWN010000169.1 <> na Primary Assembly 51332 na scaffold_41 unplaced-scaffold na na JBLZWN010000170.1 <> na Primary Assembly 47257 na scaffold_137 unplaced-scaffold na na JBLZWN010000172.1 <> na Primary Assembly 1000 na scaffold_30 unplaced-scaffold na na JBLZWN010000173.1 <> na Primary Assembly 55236 na scaffold_37 unplaced-scaffold na na JBLZWN010000174.1 <> na Primary Assembly 50632 na scaffold_155 unplaced-scaffold na na JBLZWN010000175.1 <> na Primary Assembly 95000 na scaffold_152 unplaced-scaffold na na JBLZWN010000176.1 <> na Primary Assembly 111995 na scaffold_75 unplaced-scaffold na na JBLZWN010000177.1 <> na Primary Assembly 32019 na scaffold_120 unplaced-scaffold na na JBLZWN010000178.1 <> na Primary Assembly 2000 na scaffold_28 unplaced-scaffold na na JBLZWN010000179.1 <> na Primary Assembly 62210 na