# Assembly name: UIUC_Hgly_OP50_v1 # Organism name: Heterodera glycines (soybean cyst nematode) # Infraspecific name: strain=OP50 # Taxid: 51029 # BioSample: SAMN10534534 # BioProject: PRJNA508850 # Submitter: University of Illinois at Urbana-Champaign # Date: 2025-04-04 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAMPJW01 # Assembly method: SMARTdenovo v. 2017-09-16 # Expected final version: no # Genome coverage: 26.0x # Sequencing technology: Oxford Nanopore GridION # GenBank assembly accession: GCA_049307805.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_049307815.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Hg_chrom1_OP50 assembled-molecule 1 Chromosome CM111257.1 <> na Primary Assembly 13498073 na Hg_chrom2_OP50 assembled-molecule 2 Chromosome CM111258.1 <> na Primary Assembly 16174235 na Hg_chrom3_OP50 assembled-molecule 3 Chromosome CM111259.1 <> na Primary Assembly 15184894 na Hg_chrom4_OP50 assembled-molecule 4 Chromosome CM111260.1 <> na Primary Assembly 13750537 na Hg_chrom5_OP50 assembled-molecule 5 Chromosome CM111261.1 <> na Primary Assembly 12677530 na Hg_chrom6_OP50 assembled-molecule 6 Chromosome CM111262.1 <> na Primary Assembly 11550758 na Hg_chrom7_OP50 assembled-molecule 7 Chromosome CM111263.1 <> na Primary Assembly 9699017 na Hg_chrom8_OP50 assembled-molecule 8 Chromosome CM111264.1 <> na Primary Assembly 10066600 na Hg_chrom9_OP50 assembled-molecule 9 Chromosome CM111265.1 <> na Primary Assembly 8703158 na Hg_Un_10_OP50 unplaced-scaffold na na JAMPJW010000010.1 <> na Primary Assembly 53016 na Hg_Un_11_OP50 unplaced-scaffold na na JAMPJW010000011.1 <> na Primary Assembly 26087 na Hg_Un_14_OP50 unplaced-scaffold na na JAMPJW010000012.1 <> na Primary Assembly 25000 na Hg_Un_13_OP50 unplaced-scaffold na na JAMPJW010000013.1 <> na Primary Assembly 25000 na Hg_Un_12_OP50 unplaced-scaffold na na JAMPJW010000014.1 <> na Primary Assembly 25000 na Hg_Un_15_OP50 unplaced-scaffold na na JAMPJW010000015.1 <> na Primary Assembly 22753 na Hg_Un_16_OP50 unplaced-scaffold na na JAMPJW010000016.1 <> na Primary Assembly 22729 na Hg_Un_17_OP50 unplaced-scaffold na na JAMPJW010000017.1 <> na Primary Assembly 21927 na Hg_Un_18_OP50 unplaced-scaffold na na JAMPJW010000018.1 <> na Primary Assembly 20212 na Hg_Un_19_OP50 unplaced-scaffold na na JAMPJW010000019.1 <> na Primary Assembly 20151 na Hg_Un_20_OP50 unplaced-scaffold na na JAMPJW010000020.1 <> na Primary Assembly 19516 na Hg_Un_21_OP50 unplaced-scaffold na na JAMPJW010000021.1 <> na Primary Assembly 19507 na Hg_Un_22_OP50 unplaced-scaffold na na JAMPJW010000022.1 <> na Primary Assembly 19288 na Hg_Un_23_OP50 unplaced-scaffold na na JAMPJW010000023.1 <> na Primary Assembly 18874 na Hg_Un_24_OP50 unplaced-scaffold na na JAMPJW010000024.1 <> na Primary Assembly 18648 na Hg_Un_25_OP50 unplaced-scaffold na na JAMPJW010000025.1 <> na Primary Assembly 18623 na Hg_Un_26_OP50 unplaced-scaffold na na JAMPJW010000026.1 <> na Primary Assembly 18618 na Hg_Un_27_OP50 unplaced-scaffold na na JAMPJW010000027.1 <> na Primary Assembly 18470 na Hg_Un_28_OP50 unplaced-scaffold na na JAMPJW010000028.1 <> na Primary Assembly 17909 na Hg_Un_29_OP50 unplaced-scaffold na na JAMPJW010000029.1 <> na Primary Assembly 17117 na Hg_Un_30_OP50 unplaced-scaffold na na JAMPJW010000030.1 <> na Primary Assembly 16885 na Hg_Un_31_OP50 unplaced-scaffold na na JAMPJW010000031.1 <> na Primary Assembly 16857 na Hg_Un_32_OP50 unplaced-scaffold na na JAMPJW010000032.1 <> na Primary Assembly 16249 na Hg_Un_33_OP50 unplaced-scaffold na na JAMPJW010000033.1 <> na Primary Assembly 16248 na Hg_Un_34_OP50 unplaced-scaffold na na JAMPJW010000034.1 <> na Primary Assembly 15976 na Hg_Un_35_OP50 unplaced-scaffold na na JAMPJW010000035.1 <> na Primary Assembly 14985 na Hg_Un_36_OP50 unplaced-scaffold na na JAMPJW010000036.1 <> na Primary Assembly 14977 na Hg_Un_37_OP50 unplaced-scaffold na na JAMPJW010000037.1 <> na Primary Assembly 14688 na Hg_Un_38_OP50 unplaced-scaffold na na JAMPJW010000038.1 <> na Primary Assembly 14672 na Hg_Un_39_OP50 unplaced-scaffold na na JAMPJW010000039.1 <> na Primary Assembly 14670 na Hg_Un_40_OP50 unplaced-scaffold na na JAMPJW010000040.1 <> na Primary Assembly 14633 na Hg_Un_41_OP50 unplaced-scaffold na na JAMPJW010000041.1 <> na Primary Assembly 14590 na Hg_Un_42_OP50 unplaced-scaffold na na JAMPJW010000042.1 <> na Primary Assembly 14285 na Hg_Un_43_OP50 unplaced-scaffold na na JAMPJW010000043.1 <> na Primary Assembly 14245 na Hg_Un_44_OP50 unplaced-scaffold na na JAMPJW010000044.1 <> na Primary Assembly 14220 na Hg_Un_45_OP50 unplaced-scaffold na na JAMPJW010000045.1 <> na Primary Assembly 13874 na Hg_Un_46_OP50 unplaced-scaffold na na JAMPJW010000046.1 <> na Primary Assembly 13870 na Hg_Un_47_OP50 unplaced-scaffold na na JAMPJW010000047.1 <> na Primary Assembly 13686 na Hg_Un_48_OP50 unplaced-scaffold na na JAMPJW010000048.1 <> na Primary Assembly 13577 na Hg_Un_49_OP50 unplaced-scaffold na na JAMPJW010000049.1 <> na Primary Assembly 13548 na Hg_Un_50_OP50 unplaced-scaffold na na JAMPJW010000050.1 <> na Primary Assembly 13153 na Hg_Un_51_OP50 unplaced-scaffold na na JAMPJW010000051.1 <> na Primary Assembly 13092 na Hg_Un_52_OP50 unplaced-scaffold na na JAMPJW010000052.1 <> na Primary Assembly 12754 na Hg_Un_53_OP50 unplaced-scaffold na na JAMPJW010000053.1 <> na Primary Assembly 12611 na Hg_Un_54_OP50 unplaced-scaffold na na JAMPJW010000054.1 <> na Primary Assembly 12508 na Hg_Un_55_OP50 unplaced-scaffold na na JAMPJW010000055.1 <> na Primary Assembly 12346 na Hg_Un_56_OP50 unplaced-scaffold na na JAMPJW010000056.1 <> na Primary Assembly 11868 na Hg_Un_57_OP50 unplaced-scaffold na na JAMPJW010000057.1 <> na Primary Assembly 11530 na Hg_Un_58_OP50 unplaced-scaffold na na JAMPJW010000058.1 <> na Primary Assembly 11441 na Hg_Un_59_OP50 unplaced-scaffold na na JAMPJW010000059.1 <> na Primary Assembly 11082 na Hg_Un_60_OP50 unplaced-scaffold na na JAMPJW010000060.1 <> na Primary Assembly 10132 na Hg_Un_61_OP50 unplaced-scaffold na na JAMPJW010000061.1 <> na Primary Assembly 10002 na Hg_Un_62_OP50 unplaced-scaffold na na JAMPJW010000062.1 <> na Primary Assembly 9694 na Hg_Un_63_OP50 unplaced-scaffold na na JAMPJW010000063.1 <> na Primary Assembly 9687 na Hg_Un_64_OP50 unplaced-scaffold na na JAMPJW010000064.1 <> na Primary Assembly 9373 na Hg_Un_65_OP50 unplaced-scaffold na na JAMPJW010000065.1 <> na Primary Assembly 9350 na Hg_Un_66_OP50 unplaced-scaffold na na JAMPJW010000066.1 <> na Primary Assembly 9168 na Hg_Un_67_OP50 unplaced-scaffold na na JAMPJW010000067.1 <> na Primary Assembly 7875 na Hg_Un_68_OP50 unplaced-scaffold na na JAMPJW010000068.1 <> na Primary Assembly 6806 na Hg_Un_69_OP50 unplaced-scaffold na na JAMPJW010000069.1 <> na Primary Assembly 5681 na Hg_Un_99_OP50 unplaced-scaffold na na JAMPJW010000070.1 <> na Primary Assembly 5000 na Hg_Un_98_OP50 unplaced-scaffold na na JAMPJW010000071.1 <> na Primary Assembly 5000 na Hg_Un_97_OP50 unplaced-scaffold na na JAMPJW010000072.1 <> na Primary Assembly 5000 na Hg_Un_96_OP50 unplaced-scaffold na na JAMPJW010000073.1 <> na Primary Assembly 5000 na Hg_Un_95_OP50 unplaced-scaffold na na JAMPJW010000074.1 <> na Primary Assembly 5000 na Hg_Un_94_OP50 unplaced-scaffold na na JAMPJW010000075.1 <> na Primary Assembly 5000 na Hg_Un_93_OP50 unplaced-scaffold na na JAMPJW010000076.1 <> na Primary Assembly 5000 na Hg_Un_92_OP50 unplaced-scaffold na na JAMPJW010000077.1 <> na Primary Assembly 5000 na Hg_Un_91_OP50 unplaced-scaffold na na JAMPJW010000078.1 <> na Primary Assembly 5000 na Hg_Un_90_OP50 unplaced-scaffold na na JAMPJW010000079.1 <> na Primary Assembly 5000 na Hg_Un_89_OP50 unplaced-scaffold na na JAMPJW010000080.1 <> na Primary Assembly 5000 na Hg_Un_88_OP50 unplaced-scaffold na na JAMPJW010000081.1 <> na Primary Assembly 5000 na Hg_Un_87_OP50 unplaced-scaffold na na JAMPJW010000082.1 <> na Primary Assembly 5000 na Hg_Un_86_OP50 unplaced-scaffold na na JAMPJW010000083.1 <> na Primary Assembly 5000 na Hg_Un_85_OP50 unplaced-scaffold na na JAMPJW010000084.1 <> na Primary Assembly 5000 na Hg_Un_84_OP50 unplaced-scaffold na na JAMPJW010000085.1 <> na Primary Assembly 5000 na Hg_Un_83_OP50 unplaced-scaffold na na JAMPJW010000086.1 <> na Primary Assembly 5000 na Hg_Un_82_OP50 unplaced-scaffold na na JAMPJW010000087.1 <> na Primary Assembly 5000 na Hg_Un_81_OP50 unplaced-scaffold na na JAMPJW010000088.1 <> na Primary Assembly 5000 na Hg_Un_80_OP50 unplaced-scaffold na na JAMPJW010000089.1 <> na Primary Assembly 5000 na Hg_Un_78_OP50 unplaced-scaffold na na JAMPJW010000090.1 <> na Primary Assembly 5000 na Hg_Un_77_OP50 unplaced-scaffold na na JAMPJW010000091.1 <> na Primary Assembly 5000 na Hg_Un_76_OP50 unplaced-scaffold na na JAMPJW010000092.1 <> na Primary Assembly 5000 na Hg_Un_75_OP50 unplaced-scaffold na na JAMPJW010000093.1 <> na Primary Assembly 5000 na Hg_Un_74_OP50 unplaced-scaffold na na JAMPJW010000094.1 <> na Primary Assembly 5000 na Hg_Un_73_OP50 unplaced-scaffold na na JAMPJW010000095.1 <> na Primary Assembly 5000 na Hg_Un_72_OP50 unplaced-scaffold na na JAMPJW010000096.1 <> na Primary Assembly 5000 na Hg_Un_71_OP50 unplaced-scaffold na na JAMPJW010000097.1 <> na Primary Assembly 5000 na Hg_Un_70_OP50 unplaced-scaffold na na JAMPJW010000098.1 <> na Primary Assembly 5000 na Hg_Un_100_OP50 unplaced-scaffold na na JAMPJW010000099.1 <> na Primary Assembly 5000 na Hg_Un_79_OP50 unplaced-scaffold na na JAMPJW010000100.1 <> na Primary Assembly 4961 na Hg_Un_101_OP50 unplaced-scaffold na na JAMPJW010000101.1 <> na Primary Assembly 1175 na