# Assembly name: mMicMic1.hap1 # Organism name: Micronycteris microtis (bats) # Isolate: mMicMic1 # Sex: male # Taxid: 249008 # BioSample: SAMN49262579 # BioProject: PRJNA1278802 # Submitter: Bat1K Project # Date: 2025-06-26 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBPFCR01 # Assembly method: Hifiasm + Hi-C phasing v. 0.19.3 + galaxy0; yahs v. 1.2a.2 + galaxy1 # Expected final version: no # Genome coverage: 36.17x # Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2 # GenBank assembly accession: GCA_051107205.1 # Linked assembly: GCA_051107335.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_051107225.1 Primary Assembly ## GCA_051107235.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM117682.1 <> na Primary Assembly 241778063 na SUPER_2 assembled-molecule 2 Chromosome CM117683.1 <> na Primary Assembly 238030051 na SUPER_3 assembled-molecule 3 Chromosome CM117684.1 <> na Primary Assembly 220700175 na SUPER_4 assembled-molecule 4 Chromosome CM117685.1 <> na Primary Assembly 190536982 na SUPER_5 assembled-molecule 5 Chromosome CM117686.1 <> na Primary Assembly 148122550 na SUPER_6 assembled-molecule 6 Chromosome CM117687.1 <> na Primary Assembly 134000379 na SUPER_7 assembled-molecule 7 Chromosome CM117688.1 <> na Primary Assembly 125643714 na SUPER_8 assembled-molecule 8 Chromosome CM117689.1 <> na Primary Assembly 96716968 na SUPER_9 assembled-molecule 9 Chromosome CM117690.1 <> na Primary Assembly 94269014 na SUPER_10 assembled-molecule 10 Chromosome CM117691.1 <> na Primary Assembly 89073197 na SUPER_11 assembled-molecule 11 Chromosome CM117692.1 <> na Primary Assembly 66748600 na SUPER_12 assembled-molecule 12 Chromosome CM117693.1 <> na Primary Assembly 56599977 na SUPER_13 assembled-molecule 13 Chromosome CM117694.1 <> na Primary Assembly 56259142 na SUPER_14 assembled-molecule 14 Chromosome CM117695.1 <> na Primary Assembly 48916408 na SUPER_15 assembled-molecule 15 Chromosome CM117696.1 <> na Primary Assembly 47263646 na SUPER_16 assembled-molecule 16 Chromosome CM117697.1 <> na Primary Assembly 45791958 na SUPER_17 assembled-molecule 17 Chromosome CM117698.1 <> na Primary Assembly 42969004 na SUPER_18 assembled-molecule 18 Chromosome CM117699.1 <> na Primary Assembly 38193136 na SUPER_19 assembled-molecule 19 Chromosome CM117700.1 <> na Primary Assembly 34917630 na SUPER_X assembled-molecule X Chromosome CM117701.1 <> na Primary Assembly 119516189 na SUPER_Y assembled-molecule Y Chromosome CM117702.1 <> na Primary Assembly 5944287 na SUPER_1_unloc_1 unlocalized-scaffold 1 Chromosome JBPFCR010000037.1 <> na Primary Assembly 298726 na SUPER_6_unloc_1 unlocalized-scaffold 6 Chromosome JBPFCR010000039.1 <> na Primary Assembly 286113 na SUPER_11_unloc_1 unlocalized-scaffold 11 Chromosome JBPFCR010000029.1 <> na Primary Assembly 468724 na SUPER_11_unloc_4 unlocalized-scaffold 11 Chromosome JBPFCR010000033.1 <> na Primary Assembly 335622 na SUPER_11_unloc_2 unlocalized-scaffold 11 Chromosome JBPFCR010000040.1 <> na Primary Assembly 280273 na SUPER_11_unloc_3 unlocalized-scaffold 11 Chromosome JBPFCR010000041.1 <> na Primary Assembly 279009 na SUPER_12_unloc_1 unlocalized-scaffold 12 Chromosome JBPFCR010000031.1 <> na Primary Assembly 383413 na SUPER_Y_unloc_10 unlocalized-scaffold Y Chromosome JBPFCR010000024.1 <> na Primary Assembly 881893 na SUPER_Y_unloc_1 unlocalized-scaffold Y Chromosome JBPFCR010000025.1 <> na Primary Assembly 811665 na SUPER_Y_unloc_9 unlocalized-scaffold Y Chromosome JBPFCR010000026.1 <> na Primary Assembly 634680 na SUPER_Y_unloc_7 unlocalized-scaffold Y Chromosome JBPFCR010000027.1 <> na Primary Assembly 534130 na SUPER_Y_unloc_8 unlocalized-scaffold Y Chromosome JBPFCR010000028.1 <> na Primary Assembly 504739 na SUPER_Y_unloc_11 unlocalized-scaffold Y Chromosome JBPFCR010000030.1 <> na Primary Assembly 442762 na SUPER_Y_unloc_2 unlocalized-scaffold Y Chromosome JBPFCR010000032.1 <> na Primary Assembly 355144 na SUPER_Y_unloc_3 unlocalized-scaffold Y Chromosome JBPFCR010000034.1 <> na Primary Assembly 314506 na SUPER_Y_unloc_4 unlocalized-scaffold Y Chromosome JBPFCR010000035.1 <> na Primary Assembly 301573 na SUPER_Y_unloc_5 unlocalized-scaffold Y Chromosome JBPFCR010000036.1 <> na Primary Assembly 300979 na SUPER_Y_unloc_6 unlocalized-scaffold Y Chromosome JBPFCR010000038.1 <> na Primary Assembly 293164 na Scaffold_50 unplaced-scaffold na na JBPFCR010000023.1 <> na Primary Assembly 1154546 na Scaffold_45 unplaced-scaffold na na JBPFCR010000042.1 <> na Primary Assembly 224258 na Scaffold_53 unplaced-scaffold na na JBPFCR010000043.1 <> na Primary Assembly 216343 na Scaffold_54 unplaced-scaffold na na JBPFCR010000044.1 <> na Primary Assembly 190413 na Scaffold_46 unplaced-scaffold na na JBPFCR010000045.1 <> na Primary Assembly 184280 na Scaffold_56 unplaced-scaffold na na JBPFCR010000046.1 <> na Primary Assembly 180009 na Scaffold_57 unplaced-scaffold na na JBPFCR010000047.1 <> na Primary Assembly 177588 na Scaffold_48 unplaced-scaffold na na JBPFCR010000048.1 <> na Primary Assembly 169243 na Scaffold_59 unplaced-scaffold na na JBPFCR010000049.1 <> na Primary Assembly 169175 na Scaffold_60 unplaced-scaffold na na JBPFCR010000050.1 <> na Primary Assembly 165574 na Scaffold_61 unplaced-scaffold na na JBPFCR010000051.1 <> na Primary Assembly 164364 na Scaffold_64 unplaced-scaffold na na JBPFCR010000052.1 <> na Primary Assembly 160871 na Scaffold_65 unplaced-scaffold na na JBPFCR010000053.1 <> na Primary Assembly 160593 na Scaffold_68 unplaced-scaffold na na JBPFCR010000054.1 <> na Primary Assembly 149807 na Scaffold_71 unplaced-scaffold na na JBPFCR010000055.1 <> na Primary Assembly 142236 na Scaffold_74 unplaced-scaffold na na JBPFCR010000056.1 <> na Primary Assembly 133903 na Scaffold_75 unplaced-scaffold na na JBPFCR010000057.1 <> na Primary Assembly 133248 na Scaffold_76 unplaced-scaffold na na JBPFCR010000058.1 <> na Primary Assembly 129428 na Scaffold_79 unplaced-scaffold na na JBPFCR010000059.1 <> na Primary Assembly 125699 na Scaffold_80 unplaced-scaffold na na JBPFCR010000060.1 <> na Primary Assembly 124782 na Scaffold_235 unplaced-scaffold na na JBPFCR010000061.1 <> na Primary Assembly 114757 na Scaffold_86 unplaced-scaffold na na JBPFCR010000062.1 <> na Primary Assembly 103672 na Scaffold_87 unplaced-scaffold na na JBPFCR010000063.1 <> na Primary Assembly 103141 na Scaffold_88 unplaced-scaffold na na JBPFCR010000064.1 <> na Primary Assembly 103091 na Scaffold_89 unplaced-scaffold na na JBPFCR010000065.1 <> na Primary Assembly 101586 na Scaffold_240 unplaced-scaffold na na JBPFCR010000066.1 <> na Primary Assembly 95931 na Scaffold_94 unplaced-scaffold na na JBPFCR010000067.1 <> na Primary Assembly 94127 na Scaffold_95 unplaced-scaffold na na JBPFCR010000068.1 <> na Primary Assembly 93859 na Scaffold_96 unplaced-scaffold na na JBPFCR010000069.1 <> na Primary Assembly 89918 na Scaffold_244 unplaced-scaffold na na JBPFCR010000070.1 <> na Primary Assembly 88869 na Scaffold_98 unplaced-scaffold na na JBPFCR010000071.1 <> na Primary Assembly 87875 na Scaffold_99 unplaced-scaffold na na JBPFCR010000072.1 <> na Primary Assembly 87384 na Scaffold_100 unplaced-scaffold na na JBPFCR010000073.1 <> na Primary Assembly 85514 na Scaffold_102 unplaced-scaffold na na JBPFCR010000074.1 <> na Primary Assembly 83197 na Scaffold_249 unplaced-scaffold na na JBPFCR010000075.1 <> na Primary Assembly 83003 na Scaffold_105 unplaced-scaffold na na JBPFCR010000076.1 <> na Primary Assembly 81843 na Scaffold_251 unplaced-scaffold na na JBPFCR010000077.1 <> na Primary Assembly 73375 na Scaffold_109 unplaced-scaffold na na JBPFCR010000078.1 <> na Primary Assembly 73064 na Scaffold_253 unplaced-scaffold na na JBPFCR010000079.1 <> na Primary Assembly 72898 na Scaffold_110 unplaced-scaffold na na JBPFCR010000080.1 <> na Primary Assembly 72769 na Scaffold_111 unplaced-scaffold na na JBPFCR010000081.1 <> na Primary Assembly 72642 na Scaffold_112 unplaced-scaffold na na JBPFCR010000082.1 <> na Primary Assembly 72009 na Scaffold_113 unplaced-scaffold na na JBPFCR010000083.1 <> na Primary Assembly 71820 na Scaffold_114 unplaced-scaffold na na JBPFCR010000084.1 <> na Primary Assembly 70385 na Scaffold_259 unplaced-scaffold na na JBPFCR010000085.1 <> na Primary Assembly 69673 na Scaffold_115 unplaced-scaffold na na JBPFCR010000086.1 <> na Primary Assembly 69510 na Scaffold_116 unplaced-scaffold na na JBPFCR010000087.1 <> na Primary Assembly 66502 na Scaffold_117 unplaced-scaffold na na JBPFCR010000088.1 <> na Primary Assembly 66170 na Scaffold_263 unplaced-scaffold na na JBPFCR010000089.1 <> na Primary Assembly 65885 na Scaffold_264 unplaced-scaffold na na JBPFCR010000090.1 <> na Primary Assembly 64457 na Scaffold_265 unplaced-scaffold na na JBPFCR010000091.1 <> na Primary Assembly 63885 na Scaffold_266 unplaced-scaffold na na JBPFCR010000092.1 <> na Primary Assembly 62992 na Scaffold_267 unplaced-scaffold na na JBPFCR010000093.1 <> na Primary Assembly 62322 na Scaffold_122 unplaced-scaffold na na JBPFCR010000094.1 <> na Primary Assembly 62182 na Scaffold_269 unplaced-scaffold na na JBPFCR010000095.1 <> na Primary Assembly 61671 na Scaffold_123 unplaced-scaffold na na JBPFCR010000096.1 <> na Primary Assembly 61629 na Scaffold_271 unplaced-scaffold na na JBPFCR010000097.1 <> na Primary Assembly 58065 na Scaffold_272 unplaced-scaffold na na JBPFCR010000098.1 <> na Primary Assembly 57258 na Scaffold_129 unplaced-scaffold na na JBPFCR010000099.1 <> na Primary Assembly 55657 na Scaffold_274 unplaced-scaffold na na JBPFCR010000100.1 <> na Primary Assembly 54226 na Scaffold_275 unplaced-scaffold na na JBPFCR010000101.1 <> na Primary Assembly 53860 na Scaffold_276 unplaced-scaffold na na JBPFCR010000102.1 <> na Primary Assembly 50701 na Scaffold_132 unplaced-scaffold na na JBPFCR010000103.1 <> na Primary Assembly 50370 na Scaffold_133 unplaced-scaffold na na JBPFCR010000104.1 <> na Primary Assembly 50008 na Scaffold_279 unplaced-scaffold na na JBPFCR010000105.1 <> na Primary Assembly 48914 na Scaffold_135 unplaced-scaffold na na JBPFCR010000106.1 <> na Primary Assembly 48505 na Scaffold_281 unplaced-scaffold na na JBPFCR010000107.1 <> na Primary Assembly 48087 na Scaffold_136 unplaced-scaffold na na JBPFCR010000108.1 <> na Primary Assembly 47709 na Scaffold_283 unplaced-scaffold na na JBPFCR010000109.1 <> na Primary Assembly 47286 na Scaffold_137 unplaced-scaffold na na JBPFCR010000110.1 <> na Primary Assembly 46669 na Scaffold_285 unplaced-scaffold na na JBPFCR010000111.1 <> na Primary Assembly 46581 na Scaffold_286 unplaced-scaffold na na JBPFCR010000112.1 <> na Primary Assembly 46021 na Scaffold_287 unplaced-scaffold na na JBPFCR010000113.1 <> na Primary Assembly 45456 na Scaffold_288 unplaced-scaffold na na JBPFCR010000114.1 <> na Primary Assembly 44556 na Scaffold_289 unplaced-scaffold na na JBPFCR010000115.1 <> na Primary Assembly 43929 na Scaffold_290 unplaced-scaffold na na JBPFCR010000116.1 <> na Primary Assembly 43540 na Scaffold_142 unplaced-scaffold na na JBPFCR010000117.1 <> na Primary Assembly 43537 na Scaffold_143 unplaced-scaffold na na JBPFCR010000118.1 <> na Primary Assembly 42457 na Scaffold_144 unplaced-scaffold na na JBPFCR010000119.1 <> na Primary Assembly 41885 na Scaffold_294 unplaced-scaffold na na JBPFCR010000120.1 <> na Primary Assembly 41523 na Scaffold_145 unplaced-scaffold na na JBPFCR010000121.1 <> na Primary Assembly 41486 na Scaffold_296 unplaced-scaffold na na JBPFCR010000122.1 <> na Primary Assembly 41452 na Scaffold_297 unplaced-scaffold na na JBPFCR010000123.1 <> na Primary Assembly 41381 na Scaffold_298 unplaced-scaffold na na JBPFCR010000124.1 <> na Primary Assembly 40758 na Scaffold_147 unplaced-scaffold na na JBPFCR010000125.1 <> na Primary Assembly 40731 na Scaffold_300 unplaced-scaffold na na JBPFCR010000126.1 <> na Primary Assembly 40639 na Scaffold_301 unplaced-scaffold na na JBPFCR010000127.1 <> na Primary Assembly 39994 na Scaffold_148 unplaced-scaffold na na JBPFCR010000128.1 <> na Primary Assembly 39051 na Scaffold_303 unplaced-scaffold na na JBPFCR010000129.1 <> na Primary Assembly 38418 na Scaffold_304 unplaced-scaffold na na JBPFCR010000130.1 <> na Primary Assembly 37882 na Scaffold_150 unplaced-scaffold na na JBPFCR010000131.1 <> na Primary Assembly 37736 na Scaffold_306 unplaced-scaffold na na JBPFCR010000132.1 <> na Primary Assembly 36485 na Scaffold_151 unplaced-scaffold na na JBPFCR010000133.1 <> na Primary Assembly 36052 na Scaffold_308 unplaced-scaffold na na JBPFCR010000134.1 <> na Primary Assembly 35675 na Scaffold_152 unplaced-scaffold na na JBPFCR010000135.1 <> na Primary Assembly 35567 na Scaffold_310 unplaced-scaffold na na JBPFCR010000136.1 <> na Primary Assembly 34652 na Scaffold_311 unplaced-scaffold na na JBPFCR010000137.1 <> na Primary Assembly 33640 na Scaffold_153 unplaced-scaffold na na JBPFCR010000138.1 <> na Primary Assembly 33613 na Scaffold_313 unplaced-scaffold na na JBPFCR010000139.1 <> na Primary Assembly 33551 na Scaffold_314 unplaced-scaffold na na JBPFCR010000140.1 <> na Primary Assembly 33277 na Scaffold_315 unplaced-scaffold na na JBPFCR010000141.1 <> na Primary Assembly 32248 na Scaffold_316 unplaced-scaffold na na JBPFCR010000142.1 <> na Primary Assembly 32057 na Scaffold_155 unplaced-scaffold na na JBPFCR010000143.1 <> na Primary Assembly 31958 na Scaffold_318 unplaced-scaffold na na JBPFCR010000144.1 <> na Primary Assembly 31741 na Scaffold_319 unplaced-scaffold na na JBPFCR010000145.1 <> na Primary Assembly 31367 na Scaffold_156 unplaced-scaffold na na JBPFCR010000146.1 <> na Primary Assembly 31232 na Scaffold_321 unplaced-scaffold na na JBPFCR010000147.1 <> na Primary Assembly 31199 na Scaffold_322 unplaced-scaffold na na JBPFCR010000148.1 <> na Primary Assembly 29802 na Scaffold_158 unplaced-scaffold na na JBPFCR010000149.1 <> na Primary Assembly 29082 na Scaffold_324 unplaced-scaffold na na JBPFCR010000150.1 <> na Primary Assembly 28855 na Scaffold_325 unplaced-scaffold na na JBPFCR010000151.1 <> na Primary Assembly 28588 na Scaffold_159 unplaced-scaffold na na JBPFCR010000152.1 <> na Primary Assembly 28393 na Scaffold_327 unplaced-scaffold na na JBPFCR010000153.1 <> na Primary Assembly 27999 na Scaffold_328 unplaced-scaffold na na JBPFCR010000154.1 <> na Primary Assembly 27914 na Scaffold_329 unplaced-scaffold na na JBPFCR010000155.1 <> na Primary Assembly 27694 na Scaffold_330 unplaced-scaffold na na JBPFCR010000156.1 <> na Primary Assembly 27456 na Scaffold_331 unplaced-scaffold na na JBPFCR010000157.1 <> na Primary Assembly 27101 na Scaffold_332 unplaced-scaffold na na JBPFCR010000158.1 <> na Primary Assembly 27096 na Scaffold_333 unplaced-scaffold na na JBPFCR010000159.1 <> na Primary Assembly 26868 na Scaffold_334 unplaced-scaffold na na JBPFCR010000160.1 <> na Primary Assembly 26638 na Scaffold_335 unplaced-scaffold na na JBPFCR010000161.1 <> na Primary Assembly 26335 na Scaffold_336 unplaced-scaffold na na JBPFCR010000162.1 <> na Primary Assembly 25926 na Scaffold_163 unplaced-scaffold na na JBPFCR010000163.1 <> na Primary Assembly 25185 na Scaffold_338 unplaced-scaffold na na JBPFCR010000164.1 <> na Primary Assembly 25126 na Scaffold_339 unplaced-scaffold na na JBPFCR010000165.1 <> na Primary Assembly 24865 na Scaffold_340 unplaced-scaffold na na JBPFCR010000166.1 <> na Primary Assembly 24773 na Scaffold_164 unplaced-scaffold na na JBPFCR010000167.1 <> na Primary Assembly 24649 na Scaffold_342 unplaced-scaffold na na JBPFCR010000168.1 <> na Primary Assembly 24162 na Scaffold_343 unplaced-scaffold na na JBPFCR010000169.1 <> na Primary Assembly 24006 na Scaffold_344 unplaced-scaffold na na JBPFCR010000170.1 <> na Primary Assembly 23998 na Scaffold_345 unplaced-scaffold na na JBPFCR010000171.1 <> na Primary Assembly 23959 na Scaffold_165 unplaced-scaffold na na JBPFCR010000172.1 <> na Primary Assembly 23589 na Scaffold_347 unplaced-scaffold na na JBPFCR010000173.1 <> na Primary Assembly 22949 na Scaffold_348 unplaced-scaffold na na JBPFCR010000174.1 <> na Primary Assembly 22756 na Scaffold_349 unplaced-scaffold na na JBPFCR010000175.1 <> na Primary Assembly 22608 na Scaffold_350 unplaced-scaffold na na JBPFCR010000176.1 <> na Primary Assembly 22538 na Scaffold_351 unplaced-scaffold na na JBPFCR010000177.1 <> na Primary Assembly 22414 na Scaffold_352 unplaced-scaffold na na JBPFCR010000178.1 <> na Primary Assembly 22249 na Scaffold_353 unplaced-scaffold na na JBPFCR010000179.1 <> na Primary Assembly 22015 na Scaffold_168 unplaced-scaffold na na JBPFCR010000180.1 <> na Primary Assembly 21949 na Scaffold_355 unplaced-scaffold na na JBPFCR010000181.1 <> na Primary Assembly 21721 na Scaffold_356 unplaced-scaffold na na JBPFCR010000182.1 <> na Primary Assembly 21564 na Scaffold_357 unplaced-scaffold na na JBPFCR010000183.1 <> na Primary Assembly 21345 na Scaffold_358 unplaced-scaffold na na JBPFCR010000184.1 <> na Primary Assembly 20961 na Scaffold_359 unplaced-scaffold na na JBPFCR010000185.1 <> na Primary Assembly 18907 na Scaffold_360 unplaced-scaffold na na JBPFCR010000186.1 <> na Primary Assembly 18838 na Scaffold_361 unplaced-scaffold na na JBPFCR010000187.1 <> na Primary Assembly 16567 na Scaffold_362 unplaced-scaffold na na JBPFCR010000188.1 <> na Primary Assembly 16207 na Scaffold_363 unplaced-scaffold na na JBPFCR010000189.1 <> na Primary Assembly 15706 na Scaffold_171 unplaced-scaffold na na JBPFCR010000190.1 <> na Primary Assembly 12367 na ptg000015l_rc_rotated assembled-molecule MT Mitochondrion CM117731.1 <> na non-nuclear 16743 na