# Assembly name: TcSylvioHIFI_genome_1.0 # Organism name: Trypanosoma cruzi (kinetoplastids) # Infraspecific name: strain=Sylvio X10 # Taxid: 5693 # BioSample: SAMN47416582 # BioProject: PRJNA1237338 # Submitter: McGill University # Date: 2025-07-01 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBMETK01 # Assembly method: Hifiasm v. 0.19.5 # Expected final version: yes # Genome coverage: 397.0x # Sequencing technology: PacBio Sequel II # GenBank assembly accession: GCA_051170875.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_051170915.1 Primary Assembly ## GCA_051170925.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name TcSylvioHIFI_1 assembled-molecule 1 Chromosome CM118329.1 <> na Primary Assembly 897124 na TcSylvioHIFI_2 assembled-molecule 2 Chromosome CM118330.1 <> na Primary Assembly 2204867 na TcSylvioHIFI_3 assembled-molecule 3 Chromosome CM118331.1 <> na Primary Assembly 1638490 na TcSylvioHIFI_4 assembled-molecule 4 Chromosome CM118332.1 <> na Primary Assembly 2070488 na TcSylvioHIFI_5 assembled-molecule 5 Chromosome CM118333.1 <> na Primary Assembly 1374848 na TcSylvioHIFI_6 assembled-molecule 6 Chromosome CM118334.1 <> na Primary Assembly 1182010 na TcSylvioHIFI_7 assembled-molecule 7 Chromosome CM118335.1 <> na Primary Assembly 1423805 na TcSylvioHIFI_8 assembled-molecule 8 Chromosome CM118336.1 <> na Primary Assembly 1284254 na TcSylvioHIFI_9 assembled-molecule 9 Chromosome CM118337.1 <> na Primary Assembly 1425371 na TcSylvioHIFI_10 assembled-molecule 10 Chromosome CM118338.1 <> na Primary Assembly 1349194 na TcSylvioHIFI_11 assembled-molecule 11 Chromosome CM118339.1 <> na Primary Assembly 1247523 na TcSylvioHIFI_12 assembled-molecule 12 Chromosome CM118340.1 <> na Primary Assembly 694675 na TcSylvioHIFI_13 assembled-molecule 13 Chromosome CM118341.1 <> na Primary Assembly 839773 na TcSylvioHIFI_14 assembled-molecule 14 Chromosome CM118342.1 <> na Primary Assembly 1067752 na TcSylvioHIFI_15 assembled-molecule 15 Chromosome CM118343.1 <> na Primary Assembly 921364 na TcSylvioHIFI_16 assembled-molecule 16 Chromosome CM118344.1 <> na Primary Assembly 1479766 na TcSylvioHIFI_17 assembled-molecule 17 Chromosome CM118345.1 <> na Primary Assembly 1129116 na TcSylvioHIFI_18 assembled-molecule 18 Chromosome CM118346.1 <> na Primary Assembly 1036108 na TcSylvioHIFI_19 assembled-molecule 19 Chromosome CM118347.1 <> na Primary Assembly 914153 na TcSylvioHIFI_20 assembled-molecule 20 Chromosome CM118348.1 <> na Primary Assembly 606623 na TcSylvioHIFI_21 assembled-molecule 21 Chromosome CM118349.1 <> na Primary Assembly 938715 na TcSylvioHIFI_22 assembled-molecule 22 Chromosome CM118350.1 <> na Primary Assembly 1381918 na TcSylvioHIFI_23 assembled-molecule 23 Chromosome CM118351.1 <> na Primary Assembly 703263 na TcSylvioHIFI_24 assembled-molecule 24 Chromosome CM118352.1 <> na Primary Assembly 843343 na TcSylvioHIFI_25 assembled-molecule 25 Chromosome CM118353.1 <> na Primary Assembly 653302 na TcSylvioHIFI_26 assembled-molecule 26 Chromosome CM118354.1 <> na Primary Assembly 582340 na TcSylvioHIFI_27 assembled-molecule 27 Chromosome CM118355.1 <> na Primary Assembly 627031 na TcSylvioHIFI_28 assembled-molecule 28 Chromosome CM118356.1 <> na Primary Assembly 641127 na TcSylvioHIFI_29 assembled-molecule 29 Chromosome CM118357.1 <> na Primary Assembly 2632980 na TcSylvioHIFI_30 assembled-molecule 30 Chromosome CM118358.1 <> na Primary Assembly 1183316 na TcSylvioHIFI_31 assembled-molecule 31 Chromosome CM118359.1 <> na Primary Assembly 2110958 na TcSylvio_scf_2 unplaced-scaffold na na JBMETK010000033.1 <> na Primary Assembly 68711 na TcSylvio_scf_3 unplaced-scaffold na na JBMETK010000034.1 <> na Primary Assembly 68729 na TcSylvio_scf_4 unplaced-scaffold na na JBMETK010000035.1 <> na Primary Assembly 65041 na TcSylvio_scf_5 unplaced-scaffold na na JBMETK010000036.1 <> na Primary Assembly 60706 na TcSylvio_scf_7 unplaced-scaffold na na JBMETK010000037.1 <> na Primary Assembly 51634 na TcSylvio_scf_8 unplaced-scaffold na na JBMETK010000038.1 <> na Primary Assembly 38610 na TcSylvio_scf_9 unplaced-scaffold na na JBMETK010000039.1 <> na Primary Assembly 35026 na TcSylvio_scf_10 unplaced-scaffold na na JBMETK010000040.1 <> na Primary Assembly 34530 na TcSylvio_scf_11 unplaced-scaffold na na JBMETK010000041.1 <> na Primary Assembly 34276 na TcSylvio_scf_12 unplaced-scaffold na na JBMETK010000042.1 <> na Primary Assembly 33737 na TcSylvio_scf_13 unplaced-scaffold na na JBMETK010000043.1 <> na Primary Assembly 26039 na TcSylvio_scf_14 unplaced-scaffold na na JBMETK010000044.1 <> na Primary Assembly 25628 na TcSylvio_scf_15 unplaced-scaffold na na JBMETK010000045.1 <> na Primary Assembly 25340 na TcSylvio_scf_16 unplaced-scaffold na na JBMETK010000046.1 <> na Primary Assembly 24582 na TcSylvio_scf_17 unplaced-scaffold na na JBMETK010000047.1 <> na Primary Assembly 23015 na TcSylvio_scf_18 unplaced-scaffold na na JBMETK010000048.1 <> na Primary Assembly 22981 na TcSylvio_scf_19 unplaced-scaffold na na JBMETK010000049.1 <> na Primary Assembly 22092 na TcSylvio_scf_20 unplaced-scaffold na na JBMETK010000050.1 <> na Primary Assembly 21495 na TcSylvio_scf_21 unplaced-scaffold na na JBMETK010000051.1 <> na Primary Assembly 20545 na TcSylvio_scf_22 unplaced-scaffold na na JBMETK010000052.1 <> na Primary Assembly 19589 na TcSylvio_scf_23 unplaced-scaffold na na JBMETK010000053.1 <> na Primary Assembly 18577 na TcSylvio_scf_24 unplaced-scaffold na na JBMETK010000054.1 <> na Primary Assembly 17488 na TcSylvio_scf_25 unplaced-scaffold na na JBMETK010000055.1 <> na Primary Assembly 17083 na TcSylvio_scf_26 unplaced-scaffold na na JBMETK010000056.1 <> na Primary Assembly 16929 na TcSylvio_scf_27 unplaced-scaffold na na JBMETK010000057.1 <> na Primary Assembly 16562 na TcSylvio_scf_28 unplaced-scaffold na na JBMETK010000058.1 <> na Primary Assembly 16108 na TcSylvio_scf_29 unplaced-scaffold na na JBMETK010000059.1 <> na Primary Assembly 15865 na TcSylvio_scf_30 unplaced-scaffold na na JBMETK010000060.1 <> na Primary Assembly 15746 na TcSylvio_scf_31 unplaced-scaffold na na JBMETK010000061.1 <> na Primary Assembly 15166 na TcSylvio_scf_32 unplaced-scaffold na na JBMETK010000062.1 <> na Primary Assembly 14360 na TcSylvio_scf_33 unplaced-scaffold na na JBMETK010000063.1 <> na Primary Assembly 13948 na TcSylvio_scf_34 unplaced-scaffold na na JBMETK010000064.1 <> na Primary Assembly 13352 na TcSylvio_scf_35 unplaced-scaffold na na JBMETK010000065.1 <> na Primary Assembly 13157 na TcSylvio_scf_36 unplaced-scaffold na na JBMETK010000066.1 <> na Primary Assembly 12114 na TcSylvio_scf_37 unplaced-scaffold na na JBMETK010000067.1 <> na Primary Assembly 11344 na TcSylvio_scf_38 unplaced-scaffold na na JBMETK010000068.1 <> na Primary Assembly 10025 na TcSylvio_scf_39 unplaced-scaffold na na JBMETK010000069.1 <> na Primary Assembly 9560 na TcSylvio_scf_40 unplaced-scaffold na na JBMETK010000070.1 <> na Primary Assembly 8691 na TcSylvio_scf_41 unplaced-scaffold na na JBMETK010000071.1 <> na Primary Assembly 6446 na TcSylvio_maxicircle assembled-molecule kinetoplast Kinetoplast CM118360.1 <> na non-nuclear 59947 na