# Assembly name:  ASM5131277v1
# Organism name:  Encephalitozoon intestinalis (microsporidians)
# Infraspecific name:  strain=ATCC 50507
# Taxid:          58839
# BioSample:      SAMN33950499
# BioProject:     PRJNA949644
# Submitter:      Illinois Institute of Technology
# Date:           2025-07-14
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JBLUPJ01
# Assembly method: SPAdes v. 4.0.0
# Expected final version: yes
# Genome coverage: 361x
# Sequencing technology: Illumina MiSeq
# GenBank assembly accession: GCA_051312775.1
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_051312785.1		Primary Assembly
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
c01s1	assembled-molecule	I	Chromosome	CM119893.1	<>	na	Primary Assembly	146790	na
c06s1	assembled-molecule	VI	Chromosome	CM119894.1	<>	na	Primary Assembly	208920	na
c07s1	assembled-molecule	VII	Chromosome	CM119895.1	<>	na	Primary Assembly	208214	na
c11s1	assembled-molecule	XI	Chromosome	CM119896.1	<>	na	Primary Assembly	247062	na
c02s1	unlocalized-scaffold	II	Chromosome	JBLUPJ010000002.1	<>	na	Primary Assembly	2666	na
c02s2	unlocalized-scaffold	II	Chromosome	JBLUPJ010000003.1	<>	na	Primary Assembly	1114	na
c02s3	unlocalized-scaffold	II	Chromosome	JBLUPJ010000004.1	<>	na	Primary Assembly	183271	na
c03s1	unlocalized-scaffold	III	Chromosome	JBLUPJ010000005.1	<>	na	Primary Assembly	10020	na
c03s2	unlocalized-scaffold	III	Chromosome	JBLUPJ010000006.1	<>	na	Primary Assembly	180619	na
c03s3	unlocalized-scaffold	III	Chromosome	JBLUPJ010000007.1	<>	na	Primary Assembly	3977	na
c04s1	unlocalized-scaffold	IV	Chromosome	JBLUPJ010000008.1	<>	na	Primary Assembly	196913	na
c04s2	unlocalized-scaffold	IV	Chromosome	JBLUPJ010000009.1	<>	na	Primary Assembly	3006	na
c05s1	unlocalized-scaffold	V	Chromosome	JBLUPJ010000010.1	<>	na	Primary Assembly	63344	na
c05s2	unlocalized-scaffold	V	Chromosome	JBLUPJ010000011.1	<>	na	Primary Assembly	136168	na
c08s1	unlocalized-scaffold	VIII	Chromosome	JBLUPJ010000014.1	<>	na	Primary Assembly	101123	na
c08s2	unlocalized-scaffold	VIII	Chromosome	JBLUPJ010000015.1	<>	na	Primary Assembly	1424	na
c08s3	unlocalized-scaffold	VIII	Chromosome	JBLUPJ010000016.1	<>	na	Primary Assembly	90272	na
c08s4	unlocalized-scaffold	VIII	Chromosome	JBLUPJ010000017.1	<>	na	Primary Assembly	2165	na
c09s1	unlocalized-scaffold	IX	Chromosome	JBLUPJ010000018.1	<>	na	Primary Assembly	73648	na
c09s2	unlocalized-scaffold	IX	Chromosome	JBLUPJ010000019.1	<>	na	Primary Assembly	40824	na
c09s3	unlocalized-scaffold	IX	Chromosome	JBLUPJ010000020.1	<>	na	Primary Assembly	9149	na
c09s4	unlocalized-scaffold	IX	Chromosome	JBLUPJ010000021.1	<>	na	Primary Assembly	3621	na
c09s5	unlocalized-scaffold	IX	Chromosome	JBLUPJ010000022.1	<>	na	Primary Assembly	107547	na
c10s1	unlocalized-scaffold	X	Chromosome	JBLUPJ010000023.1	<>	na	Primary Assembly	6476	na
c10s2	unlocalized-scaffold	X	Chromosome	JBLUPJ010000024.1	<>	na	Primary Assembly	5535	na
c10s3	unlocalized-scaffold	X	Chromosome	JBLUPJ010000025.1	<>	na	Primary Assembly	97548	na
c10s4	unlocalized-scaffold	X	Chromosome	JBLUPJ010000026.1	<>	na	Primary Assembly	128381	na