# Assembly name: bAgePho1.hap2 # Organism name: Agelaius phoeniceus (red-winged blackbird) # Isolate: bAgePho1 # Sex: female # Taxid: 39638 # BioSample: SAMN48528219 # BioProject: PRJNA1263560 # Submitter: Vertebrate Genomes Project # Date: 2025-07-15 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBPJSH01 # Assembly method: Hifiasm + Hi-C phasing v. 0.19.8 + galaxy0; Bionano Solve v. 3.7; yahs v. 1.2a.2 + galaxy1 # Expected final version: no # Genome coverage: 68.6x # Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2; Bionano optical mapping (Saphyr) # GenBank assembly accession: GCA_051348685.1 # Linked assembly: GCA_051311805.1 (haplotype 1) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_051348755.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM120228.1 <> na Primary Assembly 155946368 na SUPER_2 assembled-molecule 2 Chromosome CM120229.1 <> na Primary Assembly 119434187 na SUPER_3 assembled-molecule 3 Chromosome CM120230.1 <> na Primary Assembly 118415298 na SUPER_4 assembled-molecule 4 Chromosome CM120231.1 <> na Primary Assembly 74697685 na SUPER_5 assembled-molecule 5 Chromosome CM120232.1 <> na Primary Assembly 74057929 na SUPER_6 assembled-molecule 6 Chromosome CM120233.1 <> na Primary Assembly 65200977 na SUPER_7 assembled-molecule 7 Chromosome CM120234.1 <> na Primary Assembly 52113363 na SUPER_8 assembled-molecule 8 Chromosome CM120235.1 <> na Primary Assembly 45864047 na SUPER_9 assembled-molecule 9 Chromosome CM120236.1 <> na Primary Assembly 37250048 na SUPER_10 assembled-molecule 10 Chromosome CM120237.1 <> na Primary Assembly 27103411 na SUPER_11 assembled-molecule 11 Chromosome CM120238.1 <> na Primary Assembly 25858269 na SUPER_12 assembled-molecule 12 Chromosome CM120239.1 <> na Primary Assembly 21736204 na SUPER_13 assembled-molecule 13 Chromosome CM120240.1 <> na Primary Assembly 21136353 na SUPER_14 assembled-molecule 14 Chromosome CM120241.1 <> na Primary Assembly 21763323 na SUPER_15 assembled-molecule 15 Chromosome CM120242.1 <> na Primary Assembly 19750470 na SUPER_16 assembled-molecule 16 Chromosome CM120243.1 <> na Primary Assembly 17414372 na SUPER_17 assembled-molecule 17 Chromosome CM120244.1 <> na Primary Assembly 16906498 na SUPER_18 assembled-molecule 18 Chromosome CM120245.1 <> na Primary Assembly 14546589 na SUPER_19 assembled-molecule 19 Chromosome CM120246.1 <> na Primary Assembly 13692640 na SUPER_20 assembled-molecule 20 Chromosome CM120247.1 <> na Primary Assembly 12609558 na SUPER_21 assembled-molecule 21 Chromosome CM120248.1 <> na Primary Assembly 11724773 na SUPER_22 assembled-molecule 22 Chromosome CM120249.1 <> na Primary Assembly 9672322 na SUPER_23 assembled-molecule 23 Chromosome CM120250.1 <> na Primary Assembly 8062564 na SUPER_24 assembled-molecule 24 Chromosome CM120251.1 <> na Primary Assembly 8727788 na SUPER_25 assembled-molecule 25 Chromosome CM120252.1 <> na Primary Assembly 8543568 na SUPER_26 assembled-molecule 26 Chromosome CM120253.1 <> na Primary Assembly 9351066 na SUPER_27 assembled-molecule 27 Chromosome CM120254.1 <> na Primary Assembly 6729804 na SUPER_28 assembled-molecule 28 Chromosome CM120255.1 <> na Primary Assembly 7664067 na SUPER_29 assembled-molecule 29 Chromosome CM120256.1 <> na Primary Assembly 7516646 na SUPER_30 assembled-molecule 30 Chromosome CM120257.1 <> na Primary Assembly 6490488 na SUPER_31 assembled-molecule 31 Chromosome CM120258.1 <> na Primary Assembly 8671983 na SUPER_32 assembled-molecule 32 Chromosome CM120259.1 <> na Primary Assembly 5450873 na SUPER_33 assembled-molecule 33 Chromosome CM120260.1 <> na Primary Assembly 6977910 na SUPER_34 assembled-molecule 34 Chromosome CM120261.1 <> na Primary Assembly 5584705 na SUPER_35 assembled-molecule 35 Chromosome CM120262.1 <> na Primary Assembly 4834975 na SUPER_36 assembled-molecule 36 Chromosome CM120263.1 <> na Primary Assembly 2002171 na SUPER_37 assembled-molecule 37 Chromosome CM120264.1 <> na Primary Assembly 1830073 na SUPER_38 assembled-molecule 38 Chromosome CM120265.1 <> na Primary Assembly 1340032 na SUPER_1_unloc_1 unlocalized-scaffold 1 Chromosome JBPJSH010000147.1 <> na Primary Assembly 167367 na SUPER_1_unloc_4 unlocalized-scaffold 1 Chromosome JBPJSH010000171.1 <> na Primary Assembly 135008 na SUPER_1_unloc_3 unlocalized-scaffold 1 Chromosome JBPJSH010000187.1 <> na Primary Assembly 122820 na SUPER_1_unloc_2 unlocalized-scaffold 1 Chromosome JBPJSH010000225.1 <> na Primary Assembly 87838 na SUPER_2_unloc_1 unlocalized-scaffold 2 Chromosome JBPJSH010000210.1 <> na Primary Assembly 100934 na SUPER_4_unloc_1 unlocalized-scaffold 4 Chromosome JBPJSH010000123.1 <> na Primary Assembly 203933 na SUPER_11_unloc_1 unlocalized-scaffold 11 Chromosome JBPJSH010000094.1 <> na Primary Assembly 275487 na SUPER_26_unloc_1 unlocalized-scaffold 26 Chromosome JBPJSH010000045.1 <> na Primary Assembly 1332106 na Scaffold_116 unplaced-scaffold na na JBPJSH010000033.1 <> na Primary Assembly 6278917 na Scaffold_106 unplaced-scaffold na na JBPJSH010000035.1 <> na Primary Assembly 5548936 na Scaffold_111 unplaced-scaffold na na JBPJSH010000038.1 <> na Primary Assembly 3360594 na Scaffold_107 unplaced-scaffold na na JBPJSH010000039.1 <> na Primary Assembly 2854282 na Scaffold_119 unplaced-scaffold na na JBPJSH010000040.1 <> na Primary Assembly 2087223 na Scaffold_114 unplaced-scaffold na na JBPJSH010000043.1 <> na Primary Assembly 1513218 na Scaffold_80 unplaced-scaffold na na JBPJSH010000046.1 <> na Primary Assembly 1056741 na Scaffold_81 unplaced-scaffold na na JBPJSH010000047.1 <> na Primary Assembly 962324 na Scaffold_83 unplaced-scaffold na na JBPJSH010000048.1 <> na Primary Assembly 877884 na Scaffold_84 unplaced-scaffold na na JBPJSH010000049.1 <> na Primary Assembly 830404 na Scaffold_85 unplaced-scaffold na na JBPJSH010000050.1 <> na Primary Assembly 824276 na Scaffold_86 unplaced-scaffold na na JBPJSH010000051.1 <> na Primary Assembly 823370 na Scaffold_88 unplaced-scaffold na na JBPJSH010000052.1 <> na Primary Assembly 736378 na Scaffold_90 unplaced-scaffold na na JBPJSH010000053.1 <> na Primary Assembly 722433 na Scaffold_94 unplaced-scaffold na na JBPJSH010000054.1 <> na Primary Assembly 654565 na Scaffold_95 unplaced-scaffold na na JBPJSH010000055.1 <> na Primary Assembly 627767 na Scaffold_96 unplaced-scaffold na na JBPJSH010000056.1 <> na Primary Assembly 612569 na Scaffold_97 unplaced-scaffold na na JBPJSH010000057.1 <> na Primary Assembly 603295 na Scaffold_99 unplaced-scaffold na na JBPJSH010000058.1 <> na Primary Assembly 598131 na Scaffold_87 unplaced-scaffold na na JBPJSH010000059.1 <> na Primary Assembly 582599 na Scaffold_101 unplaced-scaffold na na JBPJSH010000060.1 <> na Primary Assembly 549671 na Scaffold_121 unplaced-scaffold na na JBPJSH010000061.1 <> na Primary Assembly 496945 na Scaffold_122 unplaced-scaffold na na JBPJSH010000062.1 <> na Primary Assembly 494330 na Scaffold_123 unplaced-scaffold na na JBPJSH010000063.1 <> na Primary Assembly 461514 na Scaffold_124 unplaced-scaffold na na JBPJSH010000064.1 <> na Primary Assembly 422324 na Scaffold_126 unplaced-scaffold na na JBPJSH010000065.1 <> na Primary Assembly 407292 na Scaffold_130 unplaced-scaffold na na JBPJSH010000066.1 <> na Primary Assembly 389019 na Scaffold_112 unplaced-scaffold na na JBPJSH010000067.1 <> na Primary Assembly 374845 na Scaffold_132 unplaced-scaffold na na JBPJSH010000068.1 <> na Primary Assembly 371045 na Scaffold_133 unplaced-scaffold na na JBPJSH010000069.1 <> na Primary Assembly 370499 na Scaffold_134 unplaced-scaffold na na JBPJSH010000070.1 <> na Primary Assembly 370123 na Scaffold_136 unplaced-scaffold na na JBPJSH010000071.1 <> na Primary Assembly 364860 na Scaffold_137 unplaced-scaffold na na JBPJSH010000072.1 <> na Primary Assembly 364514 na Scaffold_138 unplaced-scaffold na na JBPJSH010000073.1 <> na Primary Assembly 360495 na Scaffold_139 unplaced-scaffold na na JBPJSH010000074.1 <> na Primary Assembly 354403 na Scaffold_142 unplaced-scaffold na na JBPJSH010000075.1 <> na Primary Assembly 341115 na Scaffold_143 unplaced-scaffold na na JBPJSH010000076.1 <> na Primary Assembly 336869 na Scaffold_144 unplaced-scaffold na na JBPJSH010000077.1 <> na Primary Assembly 336557 na Scaffold_145 unplaced-scaffold na na JBPJSH010000078.1 <> na Primary Assembly 319306 na Scaffold_146 unplaced-scaffold na na JBPJSH010000079.1 <> na Primary Assembly 314240 na Scaffold_147 unplaced-scaffold na na JBPJSH010000080.1 <> na Primary Assembly 304488 na Scaffold_148 unplaced-scaffold na na JBPJSH010000081.1 <> na Primary Assembly 302775 na Scaffold_149 unplaced-scaffold na na JBPJSH010000082.1 <> na Primary Assembly 302699 na Scaffold_151 unplaced-scaffold na na JBPJSH010000083.1 <> na Primary Assembly 300479 na Scaffold_152 unplaced-scaffold na na JBPJSH010000084.1 <> na Primary Assembly 298861 na Scaffold_127 unplaced-scaffold na na JBPJSH010000085.1 <> na Primary Assembly 291299 na Scaffold_117 unplaced-scaffold na na JBPJSH010000086.1 <> na Primary Assembly 291299 na Scaffold_153 unplaced-scaffold na na JBPJSH010000087.1 <> na Primary Assembly 291051 na Scaffold_154 unplaced-scaffold na na JBPJSH010000088.1 <> na Primary Assembly 289529 na Scaffold_155 unplaced-scaffold na na JBPJSH010000089.1 <> na Primary Assembly 288418 na Scaffold_156 unplaced-scaffold na na JBPJSH010000090.1 <> na Primary Assembly 287321 na Scaffold_157 unplaced-scaffold na na JBPJSH010000091.1 <> na Primary Assembly 286395 na Scaffold_158 unplaced-scaffold na na JBPJSH010000092.1 <> na Primary Assembly 279476 na Scaffold_159 unplaced-scaffold na na JBPJSH010000093.1 <> na Primary Assembly 277544 na Scaffold_160 unplaced-scaffold na na JBPJSH010000095.1 <> na Primary Assembly 266388 na Scaffold_161 unplaced-scaffold na na JBPJSH010000096.1 <> na Primary Assembly 266119 na Scaffold_163 unplaced-scaffold na na JBPJSH010000097.1 <> na Primary Assembly 258772 na Scaffold_164 unplaced-scaffold na na JBPJSH010000098.1 <> na Primary Assembly 257804 na Scaffold_165 unplaced-scaffold na na JBPJSH010000099.1 <> na Primary Assembly 257373 na Scaffold_166 unplaced-scaffold na na JBPJSH010000100.1 <> na Primary Assembly 256831 na Scaffold_167 unplaced-scaffold na na JBPJSH010000101.1 <> na Primary Assembly 256263 na Scaffold_169 unplaced-scaffold na na JBPJSH010000102.1 <> na Primary Assembly 246533 na Scaffold_170 unplaced-scaffold na na JBPJSH010000103.1 <> na Primary Assembly 244625 na Scaffold_171 unplaced-scaffold na na JBPJSH010000104.1 <> na Primary Assembly 241006 na Scaffold_172 unplaced-scaffold na na JBPJSH010000105.1 <> na Primary Assembly 239862 na Scaffold_174 unplaced-scaffold na na JBPJSH010000106.1 <> na Primary Assembly 236485 na Scaffold_175 unplaced-scaffold na na JBPJSH010000107.1 <> na Primary Assembly 234426 na Scaffold_176 unplaced-scaffold na na JBPJSH010000108.1 <> na Primary Assembly 230252 na Scaffold_177 unplaced-scaffold na na JBPJSH010000109.1 <> na Primary Assembly 229772 na Scaffold_178 unplaced-scaffold na na JBPJSH010000110.1 <> na Primary Assembly 227357 na Scaffold_181 unplaced-scaffold na na JBPJSH010000111.1 <> na Primary Assembly 216966 na Scaffold_182 unplaced-scaffold na na JBPJSH010000112.1 <> na Primary Assembly 216613 na Scaffold_183 unplaced-scaffold na na JBPJSH010000113.1 <> na Primary Assembly 216581 na Scaffold_185 unplaced-scaffold na na JBPJSH010000114.1 <> na Primary Assembly 214224 na Scaffold_186 unplaced-scaffold na na JBPJSH010000115.1 <> na Primary Assembly 213875 na Scaffold_187 unplaced-scaffold na na JBPJSH010000116.1 <> na Primary Assembly 213099 na Scaffold_188 unplaced-scaffold na na JBPJSH010000117.1 <> na Primary Assembly 212299 na Scaffold_189 unplaced-scaffold na na JBPJSH010000118.1 <> na Primary Assembly 211362 na Scaffold_89 unplaced-scaffold na na JBPJSH010000119.1 <> na Primary Assembly 207172 na Scaffold_190 unplaced-scaffold na na JBPJSH010000120.1 <> na Primary Assembly 206586 na Scaffold_191 unplaced-scaffold na na JBPJSH010000121.1 <> na Primary Assembly 204895 na Scaffold_192 unplaced-scaffold na na JBPJSH010000122.1 <> na Primary Assembly 204182 na Scaffold_193 unplaced-scaffold na na JBPJSH010000124.1 <> na Primary Assembly 201690 na Scaffold_194 unplaced-scaffold na na JBPJSH010000125.1 <> na Primary Assembly 200999 na Scaffold_195 unplaced-scaffold na na JBPJSH010000126.1 <> na Primary Assembly 199595 na Scaffold_196 unplaced-scaffold na na JBPJSH010000127.1 <> na Primary Assembly 199536 na Scaffold_199 unplaced-scaffold na na JBPJSH010000128.1 <> na Primary Assembly 192241 na Scaffold_200 unplaced-scaffold na na JBPJSH010000129.1 <> na Primary Assembly 192059 na Scaffold_201 unplaced-scaffold na na JBPJSH010000130.1 <> na Primary Assembly 191821 na Scaffold_202 unplaced-scaffold na na JBPJSH010000131.1 <> na Primary Assembly 191631 na Scaffold_203 unplaced-scaffold na na JBPJSH010000132.1 <> na Primary Assembly 191139 na Scaffold_204 unplaced-scaffold na na JBPJSH010000133.1 <> na Primary Assembly 190732 na Scaffold_206 unplaced-scaffold na na JBPJSH010000134.1 <> na Primary Assembly 182968 na Scaffold_207 unplaced-scaffold na na JBPJSH010000135.1 <> na Primary Assembly 182157 na Scaffold_208 unplaced-scaffold na na JBPJSH010000136.1 <> na Primary Assembly 181523 na Scaffold_209 unplaced-scaffold na na JBPJSH010000137.1 <> na Primary Assembly 178993 na Scaffold_210 unplaced-scaffold na na JBPJSH010000138.1 <> na Primary Assembly 178640 na Scaffold_212 unplaced-scaffold na na JBPJSH010000139.1 <> na Primary Assembly 178044 na Scaffold_213 unplaced-scaffold na na JBPJSH010000140.1 <> na Primary Assembly 177000 na Scaffold_214 unplaced-scaffold na na JBPJSH010000141.1 <> na Primary Assembly 174656 na Scaffold_215 unplaced-scaffold na na JBPJSH010000142.1 <> na Primary Assembly 173251 na Scaffold_216 unplaced-scaffold na na JBPJSH010000143.1 <> na Primary Assembly 171430 na Scaffold_217 unplaced-scaffold na na JBPJSH010000144.1 <> na Primary Assembly 171034 na Scaffold_219 unplaced-scaffold na na JBPJSH010000145.1 <> na Primary Assembly 168311 na Scaffold_220 unplaced-scaffold na na JBPJSH010000146.1 <> na Primary Assembly 167881 na Scaffold_531 unplaced-scaffold na na JBPJSH010000148.1 <> na Primary Assembly 163820 na Scaffold_223 unplaced-scaffold na na JBPJSH010000149.1 <> na Primary Assembly 163432 na Scaffold_224 unplaced-scaffold na na JBPJSH010000150.1 <> na Primary Assembly 161551 na Scaffold_227 unplaced-scaffold na na JBPJSH010000151.1 <> na Primary Assembly 160595 na Scaffold_228 unplaced-scaffold na na JBPJSH010000152.1 <> na Primary Assembly 159824 na Scaffold_229 unplaced-scaffold na na JBPJSH010000153.1 <> na Primary Assembly 158983 na Scaffold_234 unplaced-scaffold na na JBPJSH010000154.1 <> na Primary Assembly 156070 na Scaffold_236 unplaced-scaffold na na JBPJSH010000155.1 <> na Primary Assembly 154021 na Scaffold_237 unplaced-scaffold na na JBPJSH010000156.1 <> na Primary Assembly 153951 na Scaffold_238 unplaced-scaffold na na JBPJSH010000157.1 <> na Primary Assembly 153568 na Scaffold_240 unplaced-scaffold na na JBPJSH010000158.1 <> na Primary Assembly 149203 na Scaffold_241 unplaced-scaffold na na JBPJSH010000159.1 <> na Primary Assembly 145749 na Scaffold_79 unplaced-scaffold na na JBPJSH010000160.1 <> na Primary Assembly 145649 na Scaffold_243 unplaced-scaffold na na JBPJSH010000161.1 <> na Primary Assembly 143453 na Scaffold_244 unplaced-scaffold na na JBPJSH010000162.1 <> na Primary Assembly 143324 na Scaffold_245 unplaced-scaffold na na JBPJSH010000163.1 <> na Primary Assembly 142800 na Scaffold_246 unplaced-scaffold na na JBPJSH010000164.1 <> na Primary Assembly 141492 na Scaffold_248 unplaced-scaffold na na JBPJSH010000165.1 <> na Primary Assembly 140564 na Scaffold_249 unplaced-scaffold na na JBPJSH010000166.1 <> na Primary Assembly 140295 na Scaffold_250 unplaced-scaffold na na JBPJSH010000167.1 <> na Primary Assembly 140051 na Scaffold_251 unplaced-scaffold na na JBPJSH010000168.1 <> na Primary Assembly 138681 na Scaffold_255 unplaced-scaffold na na JBPJSH010000169.1 <> na Primary Assembly 136242 na Scaffold_257 unplaced-scaffold na na JBPJSH010000170.1 <> na Primary Assembly 136120 na Scaffold_259 unplaced-scaffold na na JBPJSH010000172.1 <> na Primary Assembly 134623 na Scaffold_264 unplaced-scaffold na na JBPJSH010000173.1 <> na Primary Assembly 132153 na Scaffold_265 unplaced-scaffold na na JBPJSH010000174.1 <> na Primary Assembly 131981 na Scaffold_266 unplaced-scaffold na na JBPJSH010000175.1 <> na Primary Assembly 131411 na Scaffold_267 unplaced-scaffold na na JBPJSH010000176.1 <> na Primary Assembly 129455 na Scaffold_268 unplaced-scaffold na na JBPJSH010000177.1 <> na Primary Assembly 129189 na Scaffold_82 unplaced-scaffold na na JBPJSH010000178.1 <> na Primary Assembly 128954 na Scaffold_270 unplaced-scaffold na na JBPJSH010000179.1 <> na Primary Assembly 127674 na Scaffold_271 unplaced-scaffold na na JBPJSH010000180.1 <> na Primary Assembly 126864 na Scaffold_272 unplaced-scaffold na na JBPJSH010000181.1 <> na Primary Assembly 126307 na Scaffold_273 unplaced-scaffold na na JBPJSH010000182.1 <> na Primary Assembly 125497 na Scaffold_274 unplaced-scaffold na na JBPJSH010000183.1 <> na Primary Assembly 125076 na Scaffold_275 unplaced-scaffold na na JBPJSH010000184.1 <> na Primary Assembly 123444 na Scaffold_276 unplaced-scaffold na na JBPJSH010000185.1 <> na Primary Assembly 123288 na Scaffold_277 unplaced-scaffold na na JBPJSH010000186.1 <> na Primary Assembly 123095 na Scaffold_279 unplaced-scaffold na na JBPJSH010000188.1 <> na Primary Assembly 122539 na Scaffold_282 unplaced-scaffold na na JBPJSH010000189.1 <> na Primary Assembly 120795 na Scaffold_284 unplaced-scaffold na na JBPJSH010000190.1 <> na Primary Assembly 117256 na Scaffold_285 unplaced-scaffold na na JBPJSH010000191.1 <> na Primary Assembly 115887 na Scaffold_286 unplaced-scaffold na na JBPJSH010000192.1 <> na Primary Assembly 115706 na Scaffold_288 unplaced-scaffold na na JBPJSH010000193.1 <> na Primary Assembly 112537 na Scaffold_290 unplaced-scaffold na na JBPJSH010000194.1 <> na Primary Assembly 111891 na Scaffold_292 unplaced-scaffold na na JBPJSH010000195.1 <> na Primary Assembly 111074 na Scaffold_293 unplaced-scaffold na na JBPJSH010000196.1 <> na Primary Assembly 110196 na Scaffold_294 unplaced-scaffold na na JBPJSH010000197.1 <> na Primary Assembly 110137 na Scaffold_297 unplaced-scaffold na na JBPJSH010000198.1 <> na Primary Assembly 109293 na Scaffold_299 unplaced-scaffold na na JBPJSH010000199.1 <> na Primary Assembly 109146 na Scaffold_300 unplaced-scaffold na na JBPJSH010000200.1 <> na Primary Assembly 108329 na Scaffold_128 unplaced-scaffold na na JBPJSH010000201.1 <> na Primary Assembly 106339 na Scaffold_307 unplaced-scaffold na na JBPJSH010000202.1 <> na Primary Assembly 105578 na Scaffold_308 unplaced-scaffold na na JBPJSH010000203.1 <> na Primary Assembly 104832 na Scaffold_309 unplaced-scaffold na na JBPJSH010000204.1 <> na Primary Assembly 104284 na Scaffold_129 unplaced-scaffold na na JBPJSH010000205.1 <> na Primary Assembly 103438 na Scaffold_312 unplaced-scaffold na na JBPJSH010000206.1 <> na Primary Assembly 103044 na Scaffold_313 unplaced-scaffold na na JBPJSH010000207.1 <> na Primary Assembly 102239 na Scaffold_314 unplaced-scaffold na na JBPJSH010000208.1 <> na Primary Assembly 101575 na Scaffold_315 unplaced-scaffold na na JBPJSH010000209.1 <> na Primary Assembly 101381 na Scaffold_317 unplaced-scaffold na na JBPJSH010000211.1 <> na Primary Assembly 100314 na Scaffold_318 unplaced-scaffold na na JBPJSH010000212.1 <> na Primary Assembly 100184 na Scaffold_319 unplaced-scaffold na na JBPJSH010000213.1 <> na Primary Assembly 98854 na Scaffold_320 unplaced-scaffold na na JBPJSH010000214.1 <> na Primary Assembly 98506 na Scaffold_322 unplaced-scaffold na na JBPJSH010000215.1 <> na Primary Assembly 97749 na Scaffold_323 unplaced-scaffold na na JBPJSH010000216.1 <> na Primary Assembly 97568 na Scaffold_324 unplaced-scaffold na na JBPJSH010000217.1 <> na Primary Assembly 97520 na Scaffold_329 unplaced-scaffold na na JBPJSH010000218.1 <> na Primary Assembly 94080 na Scaffold_330 unplaced-scaffold na na JBPJSH010000219.1 <> na Primary Assembly 93397 na Scaffold_333 unplaced-scaffold na na JBPJSH010000220.1 <> na Primary Assembly 92041 na Scaffold_335 unplaced-scaffold na na JBPJSH010000221.1 <> na Primary Assembly 91239 na Scaffold_337 unplaced-scaffold na na JBPJSH010000222.1 <> na Primary Assembly 90788 na Scaffold_338 unplaced-scaffold na na JBPJSH010000223.1 <> na Primary Assembly 90187 na Scaffold_343 unplaced-scaffold na na JBPJSH010000224.1 <> na Primary Assembly 88169 na Scaffold_344 unplaced-scaffold na na JBPJSH010000226.1 <> na Primary Assembly 87820 na Scaffold_348 unplaced-scaffold na na JBPJSH010000227.1 <> na Primary Assembly 86087 na Scaffold_349 unplaced-scaffold na na JBPJSH010000228.1 <> na Primary Assembly 85978 na Scaffold_352 unplaced-scaffold na na JBPJSH010000229.1 <> na Primary Assembly 84494 na Scaffold_353 unplaced-scaffold na na JBPJSH010000230.1 <> na Primary Assembly 84235 na Scaffold_354 unplaced-scaffold na na JBPJSH010000231.1 <> na Primary Assembly 84133 na Scaffold_356 unplaced-scaffold na na JBPJSH010000232.1 <> na Primary Assembly 83893 na Scaffold_357 unplaced-scaffold na na JBPJSH010000233.1 <> na Primary Assembly 83677 na Scaffold_365 unplaced-scaffold na na JBPJSH010000234.1 <> na Primary Assembly 81715 na Scaffold_366 unplaced-scaffold na na JBPJSH010000235.1 <> na Primary Assembly 80773 na Scaffold_372 unplaced-scaffold na na JBPJSH010000236.1 <> na Primary Assembly 79281 na Scaffold_379 unplaced-scaffold na na JBPJSH010000237.1 <> na Primary Assembly 77409 na Scaffold_384 unplaced-scaffold na na JBPJSH010000238.1 <> na Primary Assembly 75713 na Scaffold_386 unplaced-scaffold na na JBPJSH010000239.1 <> na Primary Assembly 74906 na Scaffold_394 unplaced-scaffold na na JBPJSH010000240.1 <> na Primary Assembly 73942 na Scaffold_399 unplaced-scaffold na na JBPJSH010000241.1 <> na Primary Assembly 71718 na Scaffold_402 unplaced-scaffold na na JBPJSH010000242.1 <> na Primary Assembly 70555 na Scaffold_404 unplaced-scaffold na na JBPJSH010000243.1 <> na Primary Assembly 70211 na Scaffold_408 unplaced-scaffold na na JBPJSH010000244.1 <> na Primary Assembly 69319 na Scaffold_410 unplaced-scaffold na na JBPJSH010000245.1 <> na Primary Assembly 68980 na Scaffold_411 unplaced-scaffold na na JBPJSH010000246.1 <> na Primary Assembly 68804 na Scaffold_413 unplaced-scaffold na na JBPJSH010000247.1 <> na Primary Assembly 68018 na Scaffold_414 unplaced-scaffold na na JBPJSH010000248.1 <> na Primary Assembly 67780 na Scaffold_418 unplaced-scaffold na na JBPJSH010000249.1 <> na Primary Assembly 66504 na Scaffold_420 unplaced-scaffold na na JBPJSH010000250.1 <> na Primary Assembly 66054 na Scaffold_1141 unplaced-scaffold na na JBPJSH010000251.1 <> na Primary Assembly 65837 na Scaffold_424 unplaced-scaffold na na JBPJSH010000252.1 <> na Primary Assembly 65242 na Scaffold_428 unplaced-scaffold na na JBPJSH010000253.1 <> na Primary Assembly 64398 na Scaffold_429 unplaced-scaffold na na JBPJSH010000254.1 <> na Primary Assembly 64071 na Scaffold_435 unplaced-scaffold na na JBPJSH010000255.1 <> na Primary Assembly 62164 na Scaffold_440 unplaced-scaffold na na JBPJSH010000256.1 <> na Primary Assembly 60598 na Scaffold_443 unplaced-scaffold na na JBPJSH010000257.1 <> na Primary Assembly 59707 na Scaffold_445 unplaced-scaffold na na JBPJSH010000258.1 <> na Primary Assembly 59468 na Scaffold_1149 unplaced-scaffold na na JBPJSH010000259.1 <> na Primary Assembly 59302 na Scaffold_447 unplaced-scaffold na na JBPJSH010000260.1 <> na Primary Assembly 59082 na Scaffold_449 unplaced-scaffold na na JBPJSH010000261.1 <> na Primary Assembly 58608 na Scaffold_451 unplaced-scaffold na na JBPJSH010000262.1 <> na Primary Assembly 58361 na Scaffold_452 unplaced-scaffold na na JBPJSH010000263.1 <> na Primary Assembly 58232 na Scaffold_1154 unplaced-scaffold na na JBPJSH010000264.1 <> na Primary Assembly 58145 na Scaffold_456 unplaced-scaffold na na JBPJSH010000265.1 <> na Primary Assembly 57446 na Scaffold_1156 unplaced-scaffold na na JBPJSH010000266.1 <> na Primary Assembly 56444 na Scaffold_459 unplaced-scaffold na na JBPJSH010000267.1 <> na Primary Assembly 56301 na Scaffold_463 unplaced-scaffold na na JBPJSH010000268.1 <> na Primary Assembly 54743 na Scaffold_1159 unplaced-scaffold na na JBPJSH010000269.1 <> na Primary Assembly 53013 na Scaffold_474 unplaced-scaffold na na JBPJSH010000270.1 <> na Primary Assembly 50177 na Scaffold_1161 unplaced-scaffold na na JBPJSH010000271.1 <> na Primary Assembly 49865 na Scaffold_482 unplaced-scaffold na na JBPJSH010000272.1 <> na Primary Assembly 48434 na Scaffold_1163 unplaced-scaffold na na JBPJSH010000273.1 <> na Primary Assembly 48105 na Scaffold_1164 unplaced-scaffold na na JBPJSH010000274.1 <> na Primary Assembly 47219 na Scaffold_485 unplaced-scaffold na na JBPJSH010000275.1 <> na Primary Assembly 47123 na Scaffold_488 unplaced-scaffold na na JBPJSH010000276.1 <> na Primary Assembly 46674 na Scaffold_1167 unplaced-scaffold na na JBPJSH010000277.1 <> na Primary Assembly 43788 na Scaffold_500 unplaced-scaffold na na JBPJSH010000278.1 <> na Primary Assembly 41932 na Scaffold_501 unplaced-scaffold na na JBPJSH010000279.1 <> na Primary Assembly 41743 na Scaffold_502 unplaced-scaffold na na JBPJSH010000280.1 <> na Primary Assembly 40922 na Scaffold_506 unplaced-scaffold na na JBPJSH010000281.1 <> na Primary Assembly 40188 na Scaffold_508 unplaced-scaffold na na JBPJSH010000282.1 <> na Primary Assembly 39381 na Scaffold_509 unplaced-scaffold na na JBPJSH010000283.1 <> na Primary Assembly 39289 na Scaffold_514 unplaced-scaffold na na JBPJSH010000284.1 <> na Primary Assembly 38131 na Scaffold_1175 unplaced-scaffold na na JBPJSH010000285.1 <> na Primary Assembly 37110 na Scaffold_518 unplaced-scaffold na na JBPJSH010000286.1 <> na Primary Assembly 36993 na Scaffold_1177 unplaced-scaffold na na JBPJSH010000287.1 <> na Primary Assembly 34466 na Scaffold_525 unplaced-scaffold na na JBPJSH010000288.1 <> na Primary Assembly 30938 na Scaffold_530 unplaced-scaffold na na JBPJSH010000289.1 <> na Primary Assembly 18523 na