# Assembly name: FLI_Tvag_1.1 # Organism name: Trichomonas vaginalis (trichomonads) # Infraspecific name: strain=ATCC 50138 # Taxid: 5722 # BioSample: SAMN48852979 # BioProject: PRJNA1271105 # Submitter: Friedrich-Loeffler-Institut # Date: 2025-08-28 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBQPFY01 # Assembly method: Flye v. 2.9-b1768 # Expected final version: no # Genome coverage: 30.0x # Sequencing technology: Oxford Nanopore GridION; Illumina MiSeq # GenBank assembly accession: GCA_052324655.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_052324675.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_1 assembled-molecule 1 Chromosome CM126016.1 <> na Primary Assembly 45851724 na scaffold_2 assembled-molecule 2 Chromosome CM126017.1 <> na Primary Assembly 35626321 na scaffold_3 assembled-molecule 3 Chromosome CM126018.1 <> na Primary Assembly 26410110 na scaffold_4 assembled-molecule 4 Chromosome CM126019.1 <> na Primary Assembly 21943125 na scaffold_5 assembled-molecule 5 Chromosome CM126020.1 <> na Primary Assembly 17670642 na scaffold_6 assembled-molecule 6 Chromosome CM126021.1 <> na Primary Assembly 14670285 na scaffold_7 unplaced-scaffold na na JBQPFY010000007.1 <> na Primary Assembly 2005264 na scaffold_8 unplaced-scaffold na na JBQPFY010000008.1 <> na Primary Assembly 774795 na scaffold_9 unplaced-scaffold na na JBQPFY010000009.1 <> na Primary Assembly 647348 na scaffold_10 unplaced-scaffold na na JBQPFY010000010.1 <> na Primary Assembly 399170 na scaffold_11 unplaced-scaffold na na JBQPFY010000011.1 <> na Primary Assembly 381145 na scaffold_12 unplaced-scaffold na na JBQPFY010000012.1 <> na Primary Assembly 320117 na scaffold_13 unplaced-scaffold na na JBQPFY010000013.1 <> na Primary Assembly 216899 na scaffold_14 unplaced-scaffold na na JBQPFY010000014.1 <> na Primary Assembly 215578 na scaffold_15 unplaced-scaffold na na JBQPFY010000015.1 <> na Primary Assembly 180920 na scaffold_16 unplaced-scaffold na na JBQPFY010000016.1 <> na Primary Assembly 169833 na scaffold_17 unplaced-scaffold na na JBQPFY010000017.1 <> na Primary Assembly 154806 na scaffold_18 unplaced-scaffold na na JBQPFY010000018.1 <> na Primary Assembly 143522 na scaffold_19 unplaced-scaffold na na JBQPFY010000019.1 <> na Primary Assembly 143379 na scaffold_20 unplaced-scaffold na na JBQPFY010000020.1 <> na Primary Assembly 139000 na scaffold_21 unplaced-scaffold na na JBQPFY010000021.1 <> na Primary Assembly 137442 na scaffold_22 unplaced-scaffold na na JBQPFY010000022.1 <> na Primary Assembly 130779 na scaffold_23 unplaced-scaffold na na JBQPFY010000023.1 <> na Primary Assembly 111996 na scaffold_24 unplaced-scaffold na na JBQPFY010000024.1 <> na Primary Assembly 107738 na scaffold_25 unplaced-scaffold na na JBQPFY010000025.1 <> na Primary Assembly 107000 na scaffold_26 unplaced-scaffold na na JBQPFY010000026.1 <> na Primary Assembly 49766 na scaffold_27 unplaced-scaffold na na JBQPFY010000027.1 <> na Primary Assembly 101449 na scaffold_28 unplaced-scaffold na na JBQPFY010000028.1 <> na Primary Assembly 97323 na scaffold_29 unplaced-scaffold na na JBQPFY010000029.1 <> na Primary Assembly 96576 na scaffold_30 unplaced-scaffold na na JBQPFY010000030.1 <> na Primary Assembly 94550 na scaffold_31 unplaced-scaffold na na JBQPFY010000031.1 <> na Primary Assembly 92618 na scaffold_32 unplaced-scaffold na na JBQPFY010000032.1 <> na Primary Assembly 91370 na scaffold_33 unplaced-scaffold na na JBQPFY010000033.1 <> na Primary Assembly 90865 na scaffold_34 unplaced-scaffold na na JBQPFY010000034.1 <> na Primary Assembly 89480 na scaffold_35 unplaced-scaffold na na JBQPFY010000035.1 <> na Primary Assembly 88650 na scaffold_36 unplaced-scaffold na na JBQPFY010000036.1 <> na Primary Assembly 86985 na scaffold_37 unplaced-scaffold na na JBQPFY010000037.1 <> na Primary Assembly 86721 na scaffold_38 unplaced-scaffold na na JBQPFY010000038.1 <> na Primary Assembly 86121 na scaffold_39 unplaced-scaffold na na JBQPFY010000039.1 <> na Primary Assembly 83331 na scaffold_40 unplaced-scaffold na na JBQPFY010000040.1 <> na Primary Assembly 79531 na scaffold_41 unplaced-scaffold na na JBQPFY010000041.1 <> na Primary Assembly 76071 na scaffold_42 unplaced-scaffold na na JBQPFY010000042.1 <> na Primary Assembly 75319 na scaffold_43 unplaced-scaffold na na JBQPFY010000043.1 <> na Primary Assembly 71503 na scaffold_44 unplaced-scaffold na na JBQPFY010000044.1 <> na Primary Assembly 70643 na scaffold_45 unplaced-scaffold na na JBQPFY010000045.1 <> na Primary Assembly 70230 na scaffold_46 unplaced-scaffold na na JBQPFY010000046.1 <> na Primary Assembly 69221 na scaffold_47 unplaced-scaffold na na JBQPFY010000047.1 <> na Primary Assembly 68868 na scaffold_48 unplaced-scaffold na na JBQPFY010000048.1 <> na Primary Assembly 68000 na scaffold_49 unplaced-scaffold na na JBQPFY010000049.1 <> na Primary Assembly 66377 na scaffold_50 unplaced-scaffold na na JBQPFY010000050.1 <> na Primary Assembly 64000 na scaffold_51 unplaced-scaffold na na JBQPFY010000051.1 <> na Primary Assembly 63515 na scaffold_52 unplaced-scaffold na na JBQPFY010000052.1 <> na Primary Assembly 61499 na scaffold_53 unplaced-scaffold na na JBQPFY010000053.1 <> na Primary Assembly 61000 na scaffold_54 unplaced-scaffold na na JBQPFY010000054.1 <> na Primary Assembly 60650 na scaffold_55 unplaced-scaffold na na JBQPFY010000055.1 <> na Primary Assembly 57702 na scaffold_56 unplaced-scaffold na na JBQPFY010000056.1 <> na Primary Assembly 52288 na scaffold_57 unplaced-scaffold na na JBQPFY010000057.1 <> na Primary Assembly 50682 na scaffold_58 unplaced-scaffold na na JBQPFY010000058.1 <> na Primary Assembly 46594 na scaffold_59 unplaced-scaffold na na JBQPFY010000059.1 <> na Primary Assembly 46052 na scaffold_60 unplaced-scaffold na na JBQPFY010000060.1 <> na Primary Assembly 42442 na scaffold_61 unplaced-scaffold na na JBQPFY010000061.1 <> na Primary Assembly 42275 na scaffold_62 unplaced-scaffold na na JBQPFY010000062.1 <> na Primary Assembly 41842 na scaffold_63 unplaced-scaffold na na JBQPFY010000063.1 <> na Primary Assembly 40451 na scaffold_64 unplaced-scaffold na na JBQPFY010000064.1 <> na Primary Assembly 40409 na scaffold_65 unplaced-scaffold na na JBQPFY010000065.1 <> na Primary Assembly 39569 na scaffold_66 unplaced-scaffold na na JBQPFY010000066.1 <> na Primary Assembly 38589 na scaffold_67 unplaced-scaffold na na JBQPFY010000067.1 <> na Primary Assembly 36916 na scaffold_68 unplaced-scaffold na na JBQPFY010000068.1 <> na Primary Assembly 36105 na scaffold_69 unplaced-scaffold na na JBQPFY010000069.1 <> na Primary Assembly 35344 na scaffold_70 unplaced-scaffold na na JBQPFY010000070.1 <> na Primary Assembly 34963 na scaffold_71 unplaced-scaffold na na JBQPFY010000071.1 <> na Primary Assembly 34551 na scaffold_72 unplaced-scaffold na na JBQPFY010000072.1 <> na Primary Assembly 32687 na scaffold_73 unplaced-scaffold na na JBQPFY010000073.1 <> na Primary Assembly 32133 na scaffold_74 unplaced-scaffold na na JBQPFY010000074.1 <> na Primary Assembly 32003 na scaffold_75 unplaced-scaffold na na JBQPFY010000075.1 <> na Primary Assembly 31356 na scaffold_76 unplaced-scaffold na na JBQPFY010000076.1 <> na Primary Assembly 31000 na scaffold_77 unplaced-scaffold na na JBQPFY010000077.1 <> na Primary Assembly 30586 na scaffold_78 unplaced-scaffold na na JBQPFY010000078.1 <> na Primary Assembly 30428 na scaffold_79 unplaced-scaffold na na JBQPFY010000079.1 <> na Primary Assembly 30249 na scaffold_80 unplaced-scaffold na na JBQPFY010000080.1 <> na Primary Assembly 30088 na scaffold_81 unplaced-scaffold na na JBQPFY010000081.1 <> na Primary Assembly 30022 na scaffold_82 unplaced-scaffold na na JBQPFY010000082.1 <> na Primary Assembly 29800 na scaffold_83 unplaced-scaffold na na JBQPFY010000083.1 <> na Primary Assembly 29773 na scaffold_84 unplaced-scaffold na na JBQPFY010000084.1 <> na Primary Assembly 28624 na scaffold_85 unplaced-scaffold na na JBQPFY010000085.1 <> na Primary Assembly 27768 na scaffold_86 unplaced-scaffold na na JBQPFY010000086.1 <> na Primary Assembly 26921 na scaffold_87 unplaced-scaffold na na JBQPFY010000087.1 <> na Primary Assembly 26572 na scaffold_88 unplaced-scaffold na na JBQPFY010000088.1 <> na Primary Assembly 26185 na scaffold_89 unplaced-scaffold na na JBQPFY010000089.1 <> na Primary Assembly 25769 na scaffold_90 unplaced-scaffold na na JBQPFY010000090.1 <> na Primary Assembly 25320 na scaffold_91 unplaced-scaffold na na JBQPFY010000091.1 <> na Primary Assembly 24891 na scaffold_92 unplaced-scaffold na na JBQPFY010000092.1 <> na Primary Assembly 24658 na scaffold_93 unplaced-scaffold na na JBQPFY010000093.1 <> na Primary Assembly 24096 na scaffold_94 unplaced-scaffold na na JBQPFY010000094.1 <> na Primary Assembly 23734 na scaffold_95 unplaced-scaffold na na JBQPFY010000095.1 <> na Primary Assembly 23554 na scaffold_96 unplaced-scaffold na na JBQPFY010000096.1 <> na Primary Assembly 22935 na scaffold_97 unplaced-scaffold na na JBQPFY010000097.1 <> na Primary Assembly 22483 na scaffold_98 unplaced-scaffold na na JBQPFY010000098.1 <> na Primary Assembly 21510 na scaffold_99 unplaced-scaffold na na JBQPFY010000099.1 <> na Primary Assembly 21251 na scaffold_100 unplaced-scaffold na na JBQPFY010000100.1 <> na Primary Assembly 21176 na scaffold_101 unplaced-scaffold na na JBQPFY010000101.1 <> na Primary Assembly 20832 na scaffold_102 unplaced-scaffold na na JBQPFY010000102.1 <> na Primary Assembly 20818 na scaffold_103 unplaced-scaffold na na JBQPFY010000103.1 <> na Primary Assembly 20481 na scaffold_104 unplaced-scaffold na na JBQPFY010000104.1 <> na Primary Assembly 20362 na scaffold_105 unplaced-scaffold na na JBQPFY010000105.1 <> na Primary Assembly 20191 na scaffold_106 unplaced-scaffold na na JBQPFY010000106.1 <> na Primary Assembly 19990 na scaffold_107 unplaced-scaffold na na JBQPFY010000107.1 <> na Primary Assembly 19356 na scaffold_108 unplaced-scaffold na na JBQPFY010000108.1 <> na Primary Assembly 19020 na scaffold_109 unplaced-scaffold na na JBQPFY010000109.1 <> na Primary Assembly 16967 na scaffold_110 unplaced-scaffold na na JBQPFY010000110.1 <> na Primary Assembly 16893 na scaffold_111 unplaced-scaffold na na JBQPFY010000111.1 <> na Primary Assembly 16159 na scaffold_112 unplaced-scaffold na na JBQPFY010000112.1 <> na Primary Assembly 15902 na scaffold_113 unplaced-scaffold na na JBQPFY010000113.1 <> na Primary Assembly 15585 na scaffold_114 unplaced-scaffold na na JBQPFY010000114.1 <> na Primary Assembly 15367 na scaffold_115 unplaced-scaffold na na JBQPFY010000115.1 <> na Primary Assembly 14594 na scaffold_116 unplaced-scaffold na na JBQPFY010000116.1 <> na Primary Assembly 14470 na scaffold_117 unplaced-scaffold na na JBQPFY010000117.1 <> na Primary Assembly 14116 na scaffold_118 unplaced-scaffold na na JBQPFY010000118.1 <> na Primary Assembly 14110 na scaffold_119 unplaced-scaffold na na JBQPFY010000119.1 <> na Primary Assembly 13626 na scaffold_120 unplaced-scaffold na na JBQPFY010000120.1 <> na Primary Assembly 13626 na scaffold_121 unplaced-scaffold na na JBQPFY010000121.1 <> na Primary Assembly 13333 na scaffold_122 unplaced-scaffold na na JBQPFY010000122.1 <> na Primary Assembly 12685 na scaffold_123 unplaced-scaffold na na JBQPFY010000123.1 <> na Primary Assembly 12654 na scaffold_124 unplaced-scaffold na na JBQPFY010000124.1 <> na Primary Assembly 12333 na scaffold_125 unplaced-scaffold na na JBQPFY010000125.1 <> na Primary Assembly 12091 na scaffold_126 unplaced-scaffold na na JBQPFY010000126.1 <> na Primary Assembly 11889 na scaffold_127 unplaced-scaffold na na JBQPFY010000127.1 <> na Primary Assembly 11837 na scaffold_128 unplaced-scaffold na na JBQPFY010000128.1 <> na Primary Assembly 11603 na scaffold_129 unplaced-scaffold na na JBQPFY010000129.1 <> na Primary Assembly 11164 na scaffold_130 unplaced-scaffold na na JBQPFY010000130.1 <> na Primary Assembly 11020 na scaffold_131 unplaced-scaffold na na JBQPFY010000131.1 <> na Primary Assembly 10883 na scaffold_132 unplaced-scaffold na na JBQPFY010000132.1 <> na Primary Assembly 10524 na scaffold_133 unplaced-scaffold na na JBQPFY010000133.1 <> na Primary Assembly 10513 na scaffold_134 unplaced-scaffold na na JBQPFY010000134.1 <> na Primary Assembly 10291 na scaffold_135 unplaced-scaffold na na JBQPFY010000135.1 <> na Primary Assembly 9801 na scaffold_136 unplaced-scaffold na na JBQPFY010000136.1 <> na Primary Assembly 9685 na scaffold_137 unplaced-scaffold na na JBQPFY010000137.1 <> na Primary Assembly 9103 na scaffold_138 unplaced-scaffold na na JBQPFY010000138.1 <> na Primary Assembly 9075 na scaffold_139 unplaced-scaffold na na JBQPFY010000139.1 <> na Primary Assembly 9000 na scaffold_140 unplaced-scaffold na na JBQPFY010000140.1 <> na Primary Assembly 8946 na scaffold_141 unplaced-scaffold na na JBQPFY010000141.1 <> na Primary Assembly 8789 na scaffold_142 unplaced-scaffold na na JBQPFY010000142.1 <> na Primary Assembly 8764 na scaffold_143 unplaced-scaffold na na JBQPFY010000143.1 <> na Primary Assembly 8418 na scaffold_144 unplaced-scaffold na na JBQPFY010000144.1 <> na Primary Assembly 8344 na scaffold_145 unplaced-scaffold na na JBQPFY010000145.1 <> na Primary Assembly 7681 na scaffold_146 unplaced-scaffold na na JBQPFY010000146.1 <> na Primary Assembly 6801 na scaffold_147 unplaced-scaffold na na JBQPFY010000147.1 <> na Primary Assembly 6708 na scaffold_148 unplaced-scaffold na na JBQPFY010000148.1 <> na Primary Assembly 6668 na scaffold_149 unplaced-scaffold na na JBQPFY010000149.1 <> na Primary Assembly 6652 na scaffold_150 unplaced-scaffold na na JBQPFY010000150.1 <> na Primary Assembly 6638 na scaffold_151 unplaced-scaffold na na JBQPFY010000151.1 <> na Primary Assembly 6423 na scaffold_152 unplaced-scaffold na na JBQPFY010000152.1 <> na Primary Assembly 6114 na scaffold_153 unplaced-scaffold na na JBQPFY010000153.1 <> na Primary Assembly 6066 na scaffold_154 unplaced-scaffold na na JBQPFY010000154.1 <> na Primary Assembly 5775 na scaffold_155 unplaced-scaffold na na JBQPFY010000155.1 <> na Primary Assembly 5572 na scaffold_156 unplaced-scaffold na na JBQPFY010000156.1 <> na Primary Assembly 5277 na scaffold_157 unplaced-scaffold na na JBQPFY010000157.1 <> na Primary Assembly 5230 na scaffold_158 unplaced-scaffold na na JBQPFY010000158.1 <> na Primary Assembly 5150 na scaffold_159 unplaced-scaffold na na JBQPFY010000159.1 <> na Primary Assembly 4956 na scaffold_160 unplaced-scaffold na na JBQPFY010000160.1 <> na Primary Assembly 4892 na scaffold_161 unplaced-scaffold na na JBQPFY010000161.1 <> na Primary Assembly 4890 na scaffold_162 unplaced-scaffold na na JBQPFY010000162.1 <> na Primary Assembly 4522 na scaffold_163 unplaced-scaffold na na JBQPFY010000163.1 <> na Primary Assembly 4514 na scaffold_164 unplaced-scaffold na na JBQPFY010000164.1 <> na Primary Assembly 4443 na scaffold_165 unplaced-scaffold na na JBQPFY010000165.1 <> na Primary Assembly 4398 na scaffold_166 unplaced-scaffold na na JBQPFY010000166.1 <> na Primary Assembly 4370 na scaffold_167 unplaced-scaffold na na JBQPFY010000167.1 <> na Primary Assembly 4175 na scaffold_168 unplaced-scaffold na na JBQPFY010000168.1 <> na Primary Assembly 4140 na scaffold_169 unplaced-scaffold na na JBQPFY010000169.1 <> na Primary Assembly 4041 na scaffold_170 unplaced-scaffold na na JBQPFY010000170.1 <> na Primary Assembly 3975 na scaffold_171 unplaced-scaffold na na JBQPFY010000171.1 <> na Primary Assembly 3852 na scaffold_172 unplaced-scaffold na na JBQPFY010000172.1 <> na Primary Assembly 3785 na scaffold_173 unplaced-scaffold na na JBQPFY010000173.1 <> na Primary Assembly 3762 na scaffold_174 unplaced-scaffold na na JBQPFY010000174.1 <> na Primary Assembly 3730 na scaffold_175 unplaced-scaffold na na JBQPFY010000175.1 <> na Primary Assembly 3649 na scaffold_176 unplaced-scaffold na na JBQPFY010000176.1 <> na Primary Assembly 3593 na scaffold_177 unplaced-scaffold na na JBQPFY010000177.1 <> na Primary Assembly 3556 na scaffold_178 unplaced-scaffold na na JBQPFY010000178.1 <> na Primary Assembly 3364 na scaffold_179 unplaced-scaffold na na JBQPFY010000179.1 <> na Primary Assembly 3312 na scaffold_180 unplaced-scaffold na na JBQPFY010000180.1 <> na Primary Assembly 3150 na scaffold_181 unplaced-scaffold na na JBQPFY010000181.1 <> na Primary Assembly 3092 na scaffold_182 unplaced-scaffold na na JBQPFY010000182.1 <> na Primary Assembly 3085 na scaffold_183 unplaced-scaffold na na JBQPFY010000183.1 <> na Primary Assembly 3064 na scaffold_184 unplaced-scaffold na na JBQPFY010000184.1 <> na Primary Assembly 3049 na scaffold_185 unplaced-scaffold na na JBQPFY010000185.1 <> na Primary Assembly 2913 na scaffold_186 unplaced-scaffold na na JBQPFY010000186.1 <> na Primary Assembly 2900 na scaffold_187 unplaced-scaffold na na JBQPFY010000187.1 <> na Primary Assembly 2887 na scaffold_188 unplaced-scaffold na na JBQPFY010000188.1 <> na Primary Assembly 2880 na scaffold_189 unplaced-scaffold na na JBQPFY010000189.1 <> na Primary Assembly 2675 na scaffold_190 unplaced-scaffold na na JBQPFY010000190.1 <> na Primary Assembly 2455 na scaffold_191 unplaced-scaffold na na JBQPFY010000191.1 <> na Primary Assembly 2305 na scaffold_192 unplaced-scaffold na na JBQPFY010000192.1 <> na Primary Assembly 2290 na scaffold_193 unplaced-scaffold na na JBQPFY010000193.1 <> na Primary Assembly 2270 na scaffold_194 unplaced-scaffold na na JBQPFY010000194.1 <> na Primary Assembly 2158 na scaffold_195 unplaced-scaffold na na JBQPFY010000195.1 <> na Primary Assembly 2079 na scaffold_196 unplaced-scaffold na na JBQPFY010000196.1 <> na Primary Assembly 2007 na scaffold_197 unplaced-scaffold na na JBQPFY010000197.1 <> na Primary Assembly 1902 na scaffold_198 unplaced-scaffold na na JBQPFY010000198.1 <> na Primary Assembly 1779 na scaffold_199 unplaced-scaffold na na JBQPFY010000199.1 <> na Primary Assembly 1729 na scaffold_200 unplaced-scaffold na na JBQPFY010000200.1 <> na Primary Assembly 1689 na scaffold_201 unplaced-scaffold na na JBQPFY010000201.1 <> na Primary Assembly 1654 na scaffold_202 unplaced-scaffold na na JBQPFY010000202.1 <> na Primary Assembly 1553 na scaffold_203 unplaced-scaffold na na JBQPFY010000203.1 <> na Primary Assembly 1000 na scaffold_204 unplaced-scaffold na na JBQPFY010000204.1 <> na Primary Assembly 1000 na