# Assembly name: rDerMaw1.hap1 # Organism name: Dermatemys mawii (turtles) # Isolate: rDerMaw1 # Sex: male # Taxid: 55550 # BioSample: SAMN52921036 # BioProject: PRJNA1348907 # Submitter: Vertebrate Genomes Project # Date: 2025-12-18 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBSEGB01 # Assembly method: Hifiasm + Hi-C phasing v. 0.25.0 + galaxy0; yahs v. 1.2a.2 + galaxy2 # Expected final version: No # Genome coverage: 64.86x # Sequencing technology: PacBio Revio HiFi; Arima Hi-C v2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_054099655.1 # Linked assembly: GCA_054099715.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_054099675.1 Primary Assembly ## GCA_054099685.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM133850.1 <> na Primary Assembly 303394853 na SUPER_2 assembled-molecule 2 Chromosome CM133851.1 <> na Primary Assembly 227121526 na SUPER_3 assembled-molecule 3 Chromosome CM133852.1 <> na Primary Assembly 172345754 na SUPER_4 assembled-molecule 4 Chromosome CM133853.1 <> na Primary Assembly 119057281 na SUPER_5 assembled-molecule 5 Chromosome CM133854.1 <> na Primary Assembly 113606181 na SUPER_6 assembled-molecule 6 Chromosome CM133855.1 <> na Primary Assembly 112986257 na SUPER_7 assembled-molecule 7 Chromosome CM133856.1 <> na Primary Assembly 109184686 na SUPER_8 assembled-molecule 8 Chromosome CM133857.1 <> na Primary Assembly 93521265 na SUPER_9 assembled-molecule 9 Chromosome CM133858.1 <> na Primary Assembly 89290614 na SUPER_10 assembled-molecule 10 Chromosome CM133859.1 <> na Primary Assembly 74263596 na SUPER_11 assembled-molecule 11 Chromosome CM133860.1 <> na Primary Assembly 65664272 na SUPER_12 assembled-molecule 12 Chromosome CM133861.1 <> na Primary Assembly 39028344 na SUPER_13 assembled-molecule 13 Chromosome CM133862.1 <> na Primary Assembly 38528640 na SUPER_14 assembled-molecule 14 Chromosome CM133863.1 <> na Primary Assembly 33831797 na SUPER_15 assembled-molecule 15 Chromosome CM133864.1 <> na Primary Assembly 33531710 na SUPER_16 assembled-molecule 16 Chromosome CM133865.1 <> na Primary Assembly 32232531 na SUPER_17 assembled-molecule 17 Chromosome CM133866.1 <> na Primary Assembly 25293461 na SUPER_18 assembled-molecule 18 Chromosome CM133867.1 <> na Primary Assembly 25227594 na SUPER_19 assembled-molecule 19 Chromosome CM133868.1 <> na Primary Assembly 20749103 na SUPER_20 assembled-molecule 20 Chromosome CM133869.1 <> na Primary Assembly 20688917 na SUPER_21 assembled-molecule 21 Chromosome CM133870.1 <> na Primary Assembly 20076100 na SUPER_22 assembled-molecule 22 Chromosome CM133871.1 <> na Primary Assembly 19622758 na SUPER_23 assembled-molecule 23 Chromosome CM133872.1 <> na Primary Assembly 18967127 na SUPER_24 assembled-molecule 24 Chromosome CM133873.1 <> na Primary Assembly 17872704 na SUPER_25 assembled-molecule 25 Chromosome CM133874.1 <> na Primary Assembly 15774725 na SUPER_26 assembled-molecule 26 Chromosome CM133875.1 <> na Primary Assembly 15031800 na SUPER_27 assembled-molecule 27 Chromosome CM133876.1 <> na Primary Assembly 13885588 na SUPER_28 assembled-molecule 28 Chromosome CM133877.1 <> na Primary Assembly 12232853 na SUPER_2_unloc_2 unlocalized-scaffold 2 Chromosome JBSEGB010000078.1 <> na Primary Assembly 356390 na SUPER_2_unloc_3 unlocalized-scaffold 2 Chromosome JBSEGB010000080.1 <> na Primary Assembly 329043 na SUPER_2_unloc_1 unlocalized-scaffold 2 Chromosome JBSEGB010000084.1 <> na Primary Assembly 308203 na SUPER_4_unloc_1 unlocalized-scaffold 4 Chromosome JBSEGB010000063.1 <> na Primary Assembly 518095 na SUPER_5_unloc_1 unlocalized-scaffold 5 Chromosome JBSEGB010000035.1 <> na Primary Assembly 2563715 na SUPER_6_unloc_1 unlocalized-scaffold 6 Chromosome JBSEGB010000056.1 <> na Primary Assembly 736309 na SUPER_11_unloc_5 unlocalized-scaffold 11 Chromosome JBSEGB010000052.1 <> na Primary Assembly 845427 na SUPER_11_unloc_3 unlocalized-scaffold 11 Chromosome JBSEGB010000061.1 <> na Primary Assembly 539158 na SUPER_11_unloc_4 unlocalized-scaffold 11 Chromosome JBSEGB010000064.1 <> na Primary Assembly 506863 na SUPER_11_unloc_1 unlocalized-scaffold 11 Chromosome JBSEGB010000072.1 <> na Primary Assembly 446534 na SUPER_11_unloc_2 unlocalized-scaffold 11 Chromosome JBSEGB010000085.1 <> na Primary Assembly 306839 na SUPER_12_unloc_1 unlocalized-scaffold 12 Chromosome JBSEGB010000037.1 <> na Primary Assembly 1800945 na SUPER_16_unloc_1 unlocalized-scaffold 16 Chromosome JBSEGB010000043.1 <> na Primary Assembly 1171962 na SUPER_16_unloc_2 unlocalized-scaffold 16 Chromosome JBSEGB010000065.1 <> na Primary Assembly 506017 na SUPER_18_unloc_3 unlocalized-scaffold 18 Chromosome JBSEGB010000040.1 <> na Primary Assembly 1504707 na SUPER_18_unloc_5 unlocalized-scaffold 18 Chromosome JBSEGB010000067.1 <> na Primary Assembly 473442 na SUPER_18_unloc_1 unlocalized-scaffold 18 Chromosome JBSEGB010000092.1 <> na Primary Assembly 235774 na SUPER_18_unloc_4 unlocalized-scaffold 18 Chromosome JBSEGB010000093.1 <> na Primary Assembly 226181 na SUPER_18_unloc_2 unlocalized-scaffold 18 Chromosome JBSEGB010000106.1 <> na Primary Assembly 138133 na Scaffold_218 unplaced-scaffold na na JBSEGB010000030.1 <> na Primary Assembly 9705572 na Scaffold_135 unplaced-scaffold na na JBSEGB010000031.1 <> na Primary Assembly 3365287 na Scaffold_231 unplaced-scaffold na na JBSEGB010000032.1 <> na Primary Assembly 3133119 na Scaffold_236 unplaced-scaffold na na JBSEGB010000033.1 <> na Primary Assembly 2999522 na Scaffold_241 unplaced-scaffold na na JBSEGB010000034.1 <> na Primary Assembly 2658224 na Scaffold_234 unplaced-scaffold na na JBSEGB010000036.1 <> na Primary Assembly 2511544 na Scaffold_238 unplaced-scaffold na na JBSEGB010000038.1 <> na Primary Assembly 1614174 na Scaffold_159 unplaced-scaffold na na JBSEGB010000039.1 <> na Primary Assembly 1532066 na Scaffold_130 unplaced-scaffold na na JBSEGB010000041.1 <> na Primary Assembly 1208316 na Scaffold_129 unplaced-scaffold na na JBSEGB010000042.1 <> na Primary Assembly 1176726 na Scaffold_235 unplaced-scaffold na na JBSEGB010000044.1 <> na Primary Assembly 1145326 na Scaffold_131 unplaced-scaffold na na JBSEGB010000045.1 <> na Primary Assembly 1006432 na Scaffold_155 unplaced-scaffold na na JBSEGB010000046.1 <> na Primary Assembly 986024 na Scaffold_204 unplaced-scaffold na na JBSEGB010000047.1 <> na Primary Assembly 963722 na Scaffold_154 unplaced-scaffold na na JBSEGB010000048.1 <> na Primary Assembly 907713 na Scaffold_134 unplaced-scaffold na na JBSEGB010000049.1 <> na Primary Assembly 895097 na Scaffold_201 unplaced-scaffold na na JBSEGB010000050.1 <> na Primary Assembly 864233 na Scaffold_124 unplaced-scaffold na na JBSEGB010000051.1 <> na Primary Assembly 854975 na Scaffold_225 unplaced-scaffold na na JBSEGB010000053.1 <> na Primary Assembly 827969 na Scaffold_232 unplaced-scaffold na na JBSEGB010000054.1 <> na Primary Assembly 792990 na Scaffold_161 unplaced-scaffold na na JBSEGB010000055.1 <> na Primary Assembly 762021 na Scaffold_128 unplaced-scaffold na na JBSEGB010000057.1 <> na Primary Assembly 697111 na Scaffold_153 unplaced-scaffold na na JBSEGB010000058.1 <> na Primary Assembly 572531 na Scaffold_165 unplaced-scaffold na na JBSEGB010000059.1 <> na Primary Assembly 564903 na Scaffold_142 unplaced-scaffold na na JBSEGB010000060.1 <> na Primary Assembly 545866 na Scaffold_146 unplaced-scaffold na na JBSEGB010000062.1 <> na Primary Assembly 527150 na Scaffold_150 unplaced-scaffold na na JBSEGB010000066.1 <> na Primary Assembly 490855 na Scaffold_139 unplaced-scaffold na na JBSEGB010000068.1 <> na Primary Assembly 472619 na Scaffold_167 unplaced-scaffold na na JBSEGB010000069.1 <> na Primary Assembly 462934 na Scaffold_237 unplaced-scaffold na na JBSEGB010000070.1 <> na Primary Assembly 447609 na Scaffold_147 unplaced-scaffold na na JBSEGB010000071.1 <> na Primary Assembly 446867 na Scaffold_157 unplaced-scaffold na na JBSEGB010000073.1 <> na Primary Assembly 416247 na Scaffold_223 unplaced-scaffold na na JBSEGB010000074.1 <> na Primary Assembly 405104 na Scaffold_140 unplaced-scaffold na na JBSEGB010000075.1 <> na Primary Assembly 404458 na Scaffold_221 unplaced-scaffold na na JBSEGB010000076.1 <> na Primary Assembly 375935 na Scaffold_228 unplaced-scaffold na na JBSEGB010000077.1 <> na Primary Assembly 368180 na Scaffold_168 unplaced-scaffold na na JBSEGB010000079.1 <> na Primary Assembly 337166 na Scaffold_158 unplaced-scaffold na na JBSEGB010000081.1 <> na Primary Assembly 327691 na Scaffold_138 unplaced-scaffold na na JBSEGB010000082.1 <> na Primary Assembly 319085 na Scaffold_170 unplaced-scaffold na na JBSEGB010000083.1 <> na Primary Assembly 314007 na Scaffold_132 unplaced-scaffold na na JBSEGB010000086.1 <> na Primary Assembly 306141 na Scaffold_136 unplaced-scaffold na na JBSEGB010000087.1 <> na Primary Assembly 302956 na Scaffold_141 unplaced-scaffold na na JBSEGB010000088.1 <> na Primary Assembly 280950 na Scaffold_151 unplaced-scaffold na na JBSEGB010000089.1 <> na Primary Assembly 269699 na Scaffold_149 unplaced-scaffold na na JBSEGB010000090.1 <> na Primary Assembly 242771 na Scaffold_164 unplaced-scaffold na na JBSEGB010000091.1 <> na Primary Assembly 238115 na Scaffold_144 unplaced-scaffold na na JBSEGB010000094.1 <> na Primary Assembly 225655 na Scaffold_184 unplaced-scaffold na na JBSEGB010000095.1 <> na Primary Assembly 224404 na Scaffold_169 unplaced-scaffold na na JBSEGB010000096.1 <> na Primary Assembly 211486 na Scaffold_156 unplaced-scaffold na na JBSEGB010000097.1 <> na Primary Assembly 196208 na Scaffold_163 unplaced-scaffold na na JBSEGB010000098.1 <> na Primary Assembly 191538 na Scaffold_171 unplaced-scaffold na na JBSEGB010000099.1 <> na Primary Assembly 190286 na Scaffold_145 unplaced-scaffold na na JBSEGB010000100.1 <> na Primary Assembly 185874 na Scaffold_62 unplaced-scaffold na na JBSEGB010000101.1 <> na Primary Assembly 184975 na Scaffold_63 unplaced-scaffold na na JBSEGB010000102.1 <> na Primary Assembly 178916 na Scaffold_143 unplaced-scaffold na na JBSEGB010000103.1 <> na Primary Assembly 172049 na Scaffold_216 unplaced-scaffold na na JBSEGB010000104.1 <> na Primary Assembly 160773 na Scaffold_74 unplaced-scaffold na na JBSEGB010000105.1 <> na Primary Assembly 144803 na Scaffold_76 unplaced-scaffold na na JBSEGB010000107.1 <> na Primary Assembly 137889 na Scaffold_78 unplaced-scaffold na na JBSEGB010000108.1 <> na Primary Assembly 131666 na Scaffold_80 unplaced-scaffold na na JBSEGB010000109.1 <> na Primary Assembly 130802 na Scaffold_81 unplaced-scaffold na na JBSEGB010000110.1 <> na Primary Assembly 129209 na Scaffold_84 unplaced-scaffold na na JBSEGB010000111.1 <> na Primary Assembly 111735 na Scaffold_87 unplaced-scaffold na na JBSEGB010000112.1 <> na Primary Assembly 101978 na Scaffold_92 unplaced-scaffold na na JBSEGB010000113.1 <> na Primary Assembly 92984 na Scaffold_250 unplaced-scaffold na na JBSEGB010000114.1 <> na Primary Assembly 86471 na Scaffold_94 unplaced-scaffold na na JBSEGB010000115.1 <> na Primary Assembly 86067 na Scaffold_95 unplaced-scaffold na na JBSEGB010000116.1 <> na Primary Assembly 81141 na Scaffold_253 unplaced-scaffold na na JBSEGB010000117.1 <> na Primary Assembly 80943 na Scaffold_96 unplaced-scaffold na na JBSEGB010000118.1 <> na Primary Assembly 79981 na Scaffold_98 unplaced-scaffold na na JBSEGB010000119.1 <> na Primary Assembly 73079 na Scaffold_99 unplaced-scaffold na na JBSEGB010000120.1 <> na Primary Assembly 73014 na Scaffold_295 unplaced-scaffold na na JBSEGB010000121.1 <> na Primary Assembly 67511 na Scaffold_101 unplaced-scaffold na na JBSEGB010000122.1 <> na Primary Assembly 66415 na Scaffold_297 unplaced-scaffold na na JBSEGB010000123.1 <> na Primary Assembly 64305 na Scaffold_103 unplaced-scaffold na na JBSEGB010000124.1 <> na Primary Assembly 64169 na Scaffold_299 unplaced-scaffold na na JBSEGB010000125.1 <> na Primary Assembly 63110 na Scaffold_105 unplaced-scaffold na na JBSEGB010000126.1 <> na Primary Assembly 62898 na Scaffold_106 unplaced-scaffold na na JBSEGB010000127.1 <> na Primary Assembly 62672 na Scaffold_108 unplaced-scaffold na na JBSEGB010000128.1 <> na Primary Assembly 59310 na Scaffold_293 unplaced-scaffold na na JBSEGB010000129.1 <> na Primary Assembly 58420 na Scaffold_109 unplaced-scaffold na na JBSEGB010000130.1 <> na Primary Assembly 58131 na Scaffold_110 unplaced-scaffold na na JBSEGB010000131.1 <> na Primary Assembly 55813 na Scaffold_306 unplaced-scaffold na na JBSEGB010000132.1 <> na Primary Assembly 55029 na Scaffold_111 unplaced-scaffold na na JBSEGB010000133.1 <> na Primary Assembly 54533 na Scaffold_112 unplaced-scaffold na na JBSEGB010000134.1 <> na Primary Assembly 51318 na Scaffold_309 unplaced-scaffold na na JBSEGB010000135.1 <> na Primary Assembly 51072 na Scaffold_113 unplaced-scaffold na na JBSEGB010000136.1 <> na Primary Assembly 46158 na Scaffold_114 unplaced-scaffold na na JBSEGB010000137.1 <> na Primary Assembly 43998 na Scaffold_115 unplaced-scaffold na na JBSEGB010000138.1 <> na Primary Assembly 40604 na Scaffold_280 unplaced-scaffold na na JBSEGB010000139.1 <> na Primary Assembly 39436 na Scaffold_116 unplaced-scaffold na na JBSEGB010000140.1 <> na Primary Assembly 38797 na Scaffold_282 unplaced-scaffold na na JBSEGB010000141.1 <> na Primary Assembly 38680 na Scaffold_283 unplaced-scaffold na na JBSEGB010000142.1 <> na Primary Assembly 37437 na Scaffold_118 unplaced-scaffold na na JBSEGB010000143.1 <> na Primary Assembly 37232 na Scaffold_285 unplaced-scaffold na na JBSEGB010000144.1 <> na Primary Assembly 34973 na Scaffold_286 unplaced-scaffold na na JBSEGB010000145.1 <> na Primary Assembly 34766 na Scaffold_287 unplaced-scaffold na na JBSEGB010000146.1 <> na Primary Assembly 33025 na Scaffold_288 unplaced-scaffold na na JBSEGB010000147.1 <> na Primary Assembly 32087 na Scaffold_289 unplaced-scaffold na na JBSEGB010000148.1 <> na Primary Assembly 28912 na Scaffold_121 unplaced-scaffold na na JBSEGB010000149.1 <> na Primary Assembly 28523 na Scaffold_291 unplaced-scaffold na na JBSEGB010000150.1 <> na Primary Assembly 27840 na Scaffold_292 unplaced-scaffold na na JBSEGB010000151.1 <> na Primary Assembly 25231 na ptg000016l_rc_rotated assembled-molecule MT Mitochondrion CM133878.1 <> na non-nuclear 16462 na