# Assembly name: mEptChi1.hap1 # Organism name: Neoeptesicus chiriquinus (Chiriquinan serotine) # Isolate: mEptChi1 # Sex: male # Taxid: 3371121 # BioSample: SAMN52625897 # BioProject: PRJNA1339244 # Submitter: Bat1K Project # Date: 2025-12-18 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBSIDG01 # Assembly method: Hifiasm + Hi-C phasing v. 0.19.3 + galaxy0; yahs v. 1.2a.2 + galaxy1 # Expected final version: No # Genome coverage: 16.48x # Sequencing technology: PacBio Sequel II; Arima Hi-C v2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_054100705.1 # Linked assembly: GCA_054099605.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_054100715.1 Primary Assembly ## GCA_054100725.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM134158.1 <> na Primary Assembly 132721435 na SUPER_2 assembled-molecule 2 Chromosome CM134159.1 <> na Primary Assembly 119322103 na SUPER_3 assembled-molecule 3 Chromosome CM134160.1 <> na Primary Assembly 117412626 na SUPER_4 assembled-molecule 4 Chromosome CM134161.1 <> na Primary Assembly 116008521 na SUPER_5 assembled-molecule 5 Chromosome CM134162.1 <> na Primary Assembly 115025043 na SUPER_6 assembled-molecule 6 Chromosome CM134163.1 <> na Primary Assembly 113769025 na SUPER_7 assembled-molecule 7 Chromosome CM134164.1 <> na Primary Assembly 109505284 na SUPER_8 assembled-molecule 8 Chromosome CM134165.1 <> na Primary Assembly 107037369 na SUPER_9 assembled-molecule 9 Chromosome CM134166.1 <> na Primary Assembly 104867932 na SUPER_10 assembled-molecule 10 Chromosome CM134167.1 <> na Primary Assembly 98499313 na SUPER_11 assembled-molecule 11 Chromosome CM134168.1 <> na Primary Assembly 94948742 na SUPER_12 assembled-molecule 12 Chromosome CM134169.1 <> na Primary Assembly 88361067 na SUPER_13 assembled-molecule 13 Chromosome CM134170.1 <> na Primary Assembly 86668031 na SUPER_14 assembled-molecule 14 Chromosome CM134171.1 <> na Primary Assembly 82051295 na SUPER_15 assembled-molecule 15 Chromosome CM134172.1 <> na Primary Assembly 74232460 na SUPER_16 assembled-molecule 16 Chromosome CM134173.1 <> na Primary Assembly 65447156 na SUPER_17 assembled-molecule 17 Chromosome CM134174.1 <> na Primary Assembly 64537163 na SUPER_18 assembled-molecule 18 Chromosome CM134175.1 <> na Primary Assembly 58371719 na SUPER_19 assembled-molecule 19 Chromosome CM134176.1 <> na Primary Assembly 55424796 na SUPER_20 assembled-molecule 20 Chromosome CM134177.1 <> na Primary Assembly 54899096 na SUPER_21 assembled-molecule 21 Chromosome CM134178.1 <> na Primary Assembly 46858010 na SUPER_22 assembled-molecule 22 Chromosome CM134179.1 <> na Primary Assembly 31957293 na SUPER_23 assembled-molecule 23 Chromosome CM134180.1 <> na Primary Assembly 26507631 na SUPER_24 assembled-molecule 24 Chromosome CM134181.1 <> na Primary Assembly 19065000 na SUPER_X assembled-molecule X Chromosome CM134182.1 <> na Primary Assembly 140151266 na SUPER_Y assembled-molecule Y Chromosome CM134183.1 <> na Primary Assembly 10459321 na SUPER_2_unloc_1 unlocalized-scaffold 2 Chromosome JBSIDG010000054.1 <> na Primary Assembly 218179 na SUPER_2_unloc_2 unlocalized-scaffold 2 Chromosome JBSIDG010000055.1 <> na Primary Assembly 214360 na SUPER_3_unloc_1 unlocalized-scaffold 3 Chromosome JBSIDG010000038.1 <> na Primary Assembly 758611 na SUPER_4_unloc_1 unlocalized-scaffold 4 Chromosome JBSIDG010000028.1 <> na Primary Assembly 4649068 na SUPER_6_unloc_1 unlocalized-scaffold 6 Chromosome JBSIDG010000035.1 <> na Primary Assembly 1353486 na SUPER_9_unloc_1 unlocalized-scaffold 9 Chromosome JBSIDG010000029.1 <> na Primary Assembly 3093964 na SUPER_10_unloc_1 unlocalized-scaffold 10 Chromosome JBSIDG010000045.1 <> na Primary Assembly 509961 na SUPER_11_unloc_1 unlocalized-scaffold 11 Chromosome JBSIDG010000031.1 <> na Primary Assembly 1781693 na SUPER_14_unloc_2 unlocalized-scaffold 14 Chromosome JBSIDG010000036.1 <> na Primary Assembly 991395 na SUPER_14_unloc_1 unlocalized-scaffold 14 Chromosome JBSIDG010000037.1 <> na Primary Assembly 990809 na SUPER_14_unloc_3 unlocalized-scaffold 14 Chromosome JBSIDG010000039.1 <> na Primary Assembly 736626 na SUPER_15_unloc_1 unlocalized-scaffold 15 Chromosome JBSIDG010000030.1 <> na Primary Assembly 2095176 na SUPER_17_unloc_1 unlocalized-scaffold 17 Chromosome JBSIDG010000050.1 <> na Primary Assembly 344412 na SUPER_22_unloc_1 unlocalized-scaffold 22 Chromosome JBSIDG010000040.1 <> na Primary Assembly 674967 na SUPER_Y_unloc_4 unlocalized-scaffold Y Chromosome JBSIDG010000032.1 <> na Primary Assembly 1779400 na SUPER_Y_unloc_5 unlocalized-scaffold Y Chromosome JBSIDG010000033.1 <> na Primary Assembly 1757432 na SUPER_Y_unloc_3 unlocalized-scaffold Y Chromosome JBSIDG010000034.1 <> na Primary Assembly 1568008 na SUPER_Y_unloc_7 unlocalized-scaffold Y Chromosome JBSIDG010000041.1 <> na Primary Assembly 659714 na SUPER_Y_unloc_6 unlocalized-scaffold Y Chromosome JBSIDG010000044.1 <> na Primary Assembly 576936 na SUPER_Y_unloc_1 unlocalized-scaffold Y Chromosome JBSIDG010000046.1 <> na Primary Assembly 478360 na SUPER_Y_unloc_2 unlocalized-scaffold Y Chromosome JBSIDG010000048.1 <> na Primary Assembly 465716 na Scaffold_54 unplaced-scaffold na na JBSIDG010000042.1 <> na Primary Assembly 618666 na Scaffold_55 unplaced-scaffold na na JBSIDG010000043.1 <> na Primary Assembly 615332 na Scaffold_58 unplaced-scaffold na na JBSIDG010000047.1 <> na Primary Assembly 474714 na Scaffold_59 unplaced-scaffold na na JBSIDG010000049.1 <> na Primary Assembly 454789 na Scaffold_60 unplaced-scaffold na na JBSIDG010000051.1 <> na Primary Assembly 300653 na Scaffold_61 unplaced-scaffold na na JBSIDG010000052.1 <> na Primary Assembly 291656 na Scaffold_63 unplaced-scaffold na na JBSIDG010000053.1 <> na Primary Assembly 228485 na Scaffold_64 unplaced-scaffold na na JBSIDG010000056.1 <> na Primary Assembly 210769 na Scaffold_69 unplaced-scaffold na na JBSIDG010000057.1 <> na Primary Assembly 162645 na Scaffold_71 unplaced-scaffold na na JBSIDG010000058.1 <> na Primary Assembly 160884 na Scaffold_72 unplaced-scaffold na na JBSIDG010000059.1 <> na Primary Assembly 153556 na Scaffold_73 unplaced-scaffold na na JBSIDG010000060.1 <> na Primary Assembly 150749 na Scaffold_74 unplaced-scaffold na na JBSIDG010000061.1 <> na Primary Assembly 147831 na Scaffold_76 unplaced-scaffold na na JBSIDG010000062.1 <> na Primary Assembly 141971 na Scaffold_78 unplaced-scaffold na na JBSIDG010000063.1 <> na Primary Assembly 134823 na Scaffold_79 unplaced-scaffold na na JBSIDG010000064.1 <> na Primary Assembly 132809 na Scaffold_81 unplaced-scaffold na na JBSIDG010000065.1 <> na Primary Assembly 123123 na Scaffold_82 unplaced-scaffold na na JBSIDG010000066.1 <> na Primary Assembly 121848 na Scaffold_85 unplaced-scaffold na na JBSIDG010000067.1 <> na Primary Assembly 106775 na Scaffold_86 unplaced-scaffold na na JBSIDG010000068.1 <> na Primary Assembly 105752 na Scaffold_88 unplaced-scaffold na na JBSIDG010000069.1 <> na Primary Assembly 99158 na Scaffold_215 unplaced-scaffold na na JBSIDG010000070.1 <> na Primary Assembly 97062 na Scaffold_89 unplaced-scaffold na na JBSIDG010000071.1 <> na Primary Assembly 94977 na Scaffold_217 unplaced-scaffold na na JBSIDG010000072.1 <> na Primary Assembly 91516 na Scaffold_93 unplaced-scaffold na na JBSIDG010000073.1 <> na Primary Assembly 86447 na Scaffold_94 unplaced-scaffold na na JBSIDG010000074.1 <> na Primary Assembly 81671 na Scaffold_95 unplaced-scaffold na na JBSIDG010000075.1 <> na Primary Assembly 81587 na Scaffold_96 unplaced-scaffold na na JBSIDG010000076.1 <> na Primary Assembly 80902 na Scaffold_222 unplaced-scaffold na na JBSIDG010000077.1 <> na Primary Assembly 78660 na Scaffold_99 unplaced-scaffold na na JBSIDG010000078.1 <> na Primary Assembly 76422 na Scaffold_224 unplaced-scaffold na na JBSIDG010000079.1 <> na Primary Assembly 73826 na Scaffold_225 unplaced-scaffold na na JBSIDG010000080.1 <> na Primary Assembly 72047 na Scaffold_102 unplaced-scaffold na na JBSIDG010000081.1 <> na Primary Assembly 69690 na Scaffold_227 unplaced-scaffold na na JBSIDG010000082.1 <> na Primary Assembly 69009 na Scaffold_103 unplaced-scaffold na na JBSIDG010000083.1 <> na Primary Assembly 68259 na Scaffold_104 unplaced-scaffold na na JBSIDG010000084.1 <> na Primary Assembly 64642 na Scaffold_230 unplaced-scaffold na na JBSIDG010000085.1 <> na Primary Assembly 63574 na Scaffold_231 unplaced-scaffold na na JBSIDG010000086.1 <> na Primary Assembly 61803 na Scaffold_232 unplaced-scaffold na na JBSIDG010000087.1 <> na Primary Assembly 61613 na Scaffold_233 unplaced-scaffold na na JBSIDG010000088.1 <> na Primary Assembly 60257 na Scaffold_107 unplaced-scaffold na na JBSIDG010000089.1 <> na Primary Assembly 59749 na Scaffold_108 unplaced-scaffold na na JBSIDG010000090.1 <> na Primary Assembly 58034 na Scaffold_109 unplaced-scaffold na na JBSIDG010000091.1 <> na Primary Assembly 56916 na Scaffold_237 unplaced-scaffold na na JBSIDG010000092.1 <> na Primary Assembly 56735 na Scaffold_238 unplaced-scaffold na na JBSIDG010000093.1 <> na Primary Assembly 56282 na Scaffold_239 unplaced-scaffold na na JBSIDG010000094.1 <> na Primary Assembly 55292 na Scaffold_112 unplaced-scaffold na na JBSIDG010000095.1 <> na Primary Assembly 53401 na Scaffold_241 unplaced-scaffold na na JBSIDG010000096.1 <> na Primary Assembly 53226 na Scaffold_113 unplaced-scaffold na na JBSIDG010000097.1 <> na Primary Assembly 53158 na Scaffold_243 unplaced-scaffold na na JBSIDG010000098.1 <> na Primary Assembly 51863 na Scaffold_244 unplaced-scaffold na na JBSIDG010000099.1 <> na Primary Assembly 50050 na Scaffold_117 unplaced-scaffold na na JBSIDG010000100.1 <> na Primary Assembly 49266 na Scaffold_246 unplaced-scaffold na na JBSIDG010000101.1 <> na Primary Assembly 48643 na Scaffold_247 unplaced-scaffold na na JBSIDG010000102.1 <> na Primary Assembly 48224 na Scaffold_248 unplaced-scaffold na na JBSIDG010000103.1 <> na Primary Assembly 47099 na Scaffold_120 unplaced-scaffold na na JBSIDG010000104.1 <> na Primary Assembly 47031 na Scaffold_250 unplaced-scaffold na na JBSIDG010000105.1 <> na Primary Assembly 46834 na Scaffold_251 unplaced-scaffold na na JBSIDG010000106.1 <> na Primary Assembly 45578 na Scaffold_252 unplaced-scaffold na na JBSIDG010000107.1 <> na Primary Assembly 43972 na Scaffold_253 unplaced-scaffold na na JBSIDG010000108.1 <> na Primary Assembly 43326 na Scaffold_123 unplaced-scaffold na na JBSIDG010000109.1 <> na Primary Assembly 43051 na Scaffold_255 unplaced-scaffold na na JBSIDG010000110.1 <> na Primary Assembly 42684 na Scaffold_256 unplaced-scaffold na na JBSIDG010000111.1 <> na Primary Assembly 42089 na Scaffold_126 unplaced-scaffold na na JBSIDG010000112.1 <> na Primary Assembly 39203 na Scaffold_258 unplaced-scaffold na na JBSIDG010000113.1 <> na Primary Assembly 39025 na Scaffold_259 unplaced-scaffold na na JBSIDG010000114.1 <> na Primary Assembly 38113 na Scaffold_260 unplaced-scaffold na na JBSIDG010000115.1 <> na Primary Assembly 35664 na Scaffold_261 unplaced-scaffold na na JBSIDG010000116.1 <> na Primary Assembly 34591 na Scaffold_130 unplaced-scaffold na na JBSIDG010000117.1 <> na Primary Assembly 32759 na Scaffold_263 unplaced-scaffold na na JBSIDG010000118.1 <> na Primary Assembly 31745 na Scaffold_264 unplaced-scaffold na na JBSIDG010000119.1 <> na Primary Assembly 31259 na Scaffold_265 unplaced-scaffold na na JBSIDG010000120.1 <> na Primary Assembly 30301 na Scaffold_266 unplaced-scaffold na na JBSIDG010000121.1 <> na Primary Assembly 29070 na Scaffold_267 unplaced-scaffold na na JBSIDG010000122.1 <> na Primary Assembly 28918 na Scaffold_268 unplaced-scaffold na na JBSIDG010000123.1 <> na Primary Assembly 28860 na Scaffold_133 unplaced-scaffold na na JBSIDG010000124.1 <> na Primary Assembly 28706 na Scaffold_270 unplaced-scaffold na na JBSIDG010000125.1 <> na Primary Assembly 28101 na Scaffold_271 unplaced-scaffold na na JBSIDG010000126.1 <> na Primary Assembly 27627 na Scaffold_272 unplaced-scaffold na na JBSIDG010000127.1 <> na Primary Assembly 27193 na Scaffold_273 unplaced-scaffold na na JBSIDG010000128.1 <> na Primary Assembly 26719 na Scaffold_134 unplaced-scaffold na na JBSIDG010000129.1 <> na Primary Assembly 26377 na Scaffold_276 unplaced-scaffold na na JBSIDG010000130.1 <> na Primary Assembly 25061 na Scaffold_277 unplaced-scaffold na na JBSIDG010000131.1 <> na Primary Assembly 23589 na Scaffold_278 unplaced-scaffold na na JBSIDG010000132.1 <> na Primary Assembly 19633 na Scaffold_279 unplaced-scaffold na na JBSIDG010000133.1 <> na Primary Assembly 18871 na atg000019l_rotated assembled-molecule MT Mitochondrion CM134184.1 <> na non-nuclear 16837 na