# Assembly name: fTakRub1.3 # Organism name: Takifugu rubripes (torafugu) # Taxid: 31033 # BioSample: SAMEA104384834 # BioProject: PRJEB31988 # Submitter: Wellcome Sanger Institute # Date: 2021-04-24 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAAJGN03 # Genome coverage: 83x # RefSeq category: Representative Genome # GenBank assembly accession: GCA_901000725.3 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_901000724.3 Primary Assembly ## GCA_901000726.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_1 assembled-molecule 1 Chromosome LR584231.2 <> na Primary Assembly 29232231 na scaffold_8_arrow_ctg1 assembled-molecule 2 Chromosome LR584245.2 <> na Primary Assembly 15686389 na scaffold_3 assembled-molecule 3 Chromosome LR584237.1 <> na Primary Assembly 17484280 na scaffold_4 assembled-molecule 4 Chromosome LR584242.2 <> na Primary Assembly 16363587 na scaffold_5 assembled-molecule 5 Chromosome LR584247.1 <> na Primary Assembly 14586308 na scaffold_6 assembled-molecule 6 Chromosome LR584250.1 <> na Primary Assembly 12913240 na scaffold_7 assembled-molecule 7 Chromosome LR584238.1 <> na Primary Assembly 17515293 na scaffold_8 assembled-molecule 8 Chromosome LR584234.2 <> na Primary Assembly 19721368 na scaffold_1_arrow_ctg1_2 assembled-molecule 9 Chromosome LR584246.2 <> na Primary Assembly 15473624 na scaffold_10 assembled-molecule 10 Chromosome LR584251.2 <> na Primary Assembly 12556898 na scaffold_11 assembled-molecule 11 Chromosome LR584241.1 <> na Primary Assembly 16367601 na scaffold_12 assembled-molecule 12 Chromosome LR584248.2 <> na Primary Assembly 13571579 na scaffold_13 assembled-molecule 13 Chromosome LR584232.1 <> na Primary Assembly 21507415 na scaffold_14 assembled-molecule 14 Chromosome LR584244.1 <> na Primary Assembly 16036328 na scaffold_15 assembled-molecule 15 Chromosome LR584240.2 <> na Primary Assembly 16705553 na scaffold_16 assembled-molecule 16 Chromosome LR584249.2 <> na Primary Assembly 13527504 na scaffold_17 assembled-molecule 17 Chromosome LR584239.2 <> na Primary Assembly 16842301 na scaffold_18 assembled-molecule 18 Chromosome LR584252.2 <> na Primary Assembly 10237708 na scaffold_19 assembled-molecule 19 Chromosome LR584235.1 <> na Primary Assembly 19418397 na scaffold_20 assembled-molecule 20 Chromosome LR584236.2 <> na Primary Assembly 18239318 na scaffold_21 assembled-molecule 21 Chromosome LR584233.2 <> na Primary Assembly 20050447 na scaffold_22 assembled-molecule 22 Chromosome LR584243.1 <> na Primary Assembly 16056980 na contig1 unplaced-scaffold na na CAAJGN030000001.1 <> na Primary Assembly 64808 na contig2 unplaced-scaffold na na CAAJGN030000002.1 <> na Primary Assembly 63402 na contig3 unplaced-scaffold na na CAAJGN030000003.1 <> na Primary Assembly 63354 na contig4 unplaced-scaffold na na CAAJGN030000004.1 <> na Primary Assembly 63531 na contig5 unplaced-scaffold na na CAAJGN030000005.1 <> na Primary Assembly 62646 na contig6 unplaced-scaffold na na CAAJGN030000006.1 <> na Primary Assembly 62542 na contig7 unplaced-scaffold na na CAAJGN030000007.1 <> na Primary Assembly 61109 na contig8 unplaced-scaffold na na CAAJGN030000008.1 <> na Primary Assembly 59120 na contig9 unplaced-scaffold na na CAAJGN030000009.1 <> na Primary Assembly 57647 na contig10 unplaced-scaffold na na CAAJGN030000010.1 <> na Primary Assembly 56640 na contig11 unplaced-scaffold na na CAAJGN030000011.1 <> na Primary Assembly 55156 na contig12 unplaced-scaffold na na CAAJGN030000012.1 <> na Primary Assembly 55627 na contig13 unplaced-scaffold na na CAAJGN030000013.1 <> na Primary Assembly 53958 na contig14 unplaced-scaffold na na CAAJGN030000014.1 <> na Primary Assembly 53563 na contig15 unplaced-scaffold na na CAAJGN030000015.1 <> na Primary Assembly 53340 na contig16 unplaced-scaffold na na CAAJGN030000016.1 <> na Primary Assembly 53209 na contig17 unplaced-scaffold na na CAAJGN030000017.1 <> na Primary Assembly 52850 na contig18 unplaced-scaffold na na CAAJGN030000018.1 <> na Primary Assembly 52280 na contig19 unplaced-scaffold na na CAAJGN030000019.1 <> na Primary Assembly 51742 na contig20 unplaced-scaffold na na CAAJGN030000020.1 <> na Primary Assembly 51609 na contig21 unplaced-scaffold na na CAAJGN030000021.1 <> na Primary Assembly 51368 na contig22 unplaced-scaffold na na CAAJGN030000022.1 <> na Primary Assembly 50761 na contig23 unplaced-scaffold na na CAAJGN030000023.1 <> na Primary Assembly 50749 na contig24 unplaced-scaffold na na CAAJGN030000024.1 <> na Primary Assembly 50425 na contig25 unplaced-scaffold na na CAAJGN030000025.1 <> na Primary Assembly 50389 na contig26 unplaced-scaffold na na CAAJGN030000026.1 <> na Primary Assembly 50227 na contig27 unplaced-scaffold na na CAAJGN030000027.1 <> na Primary Assembly 50162 na contig28 unplaced-scaffold na na CAAJGN030000028.1 <> na Primary Assembly 50377 na contig29 unplaced-scaffold na na CAAJGN030000029.1 <> na Primary Assembly 50254 na contig30 unplaced-scaffold na na CAAJGN030000030.1 <> na Primary Assembly 50253 na contig31 unplaced-scaffold na na CAAJGN030000031.1 <> na Primary Assembly 50112 na contig32 unplaced-scaffold na na CAAJGN030000032.1 <> na Primary Assembly 50090 na contig33 unplaced-scaffold na na CAAJGN030000033.1 <> na Primary Assembly 49996 na contig34 unplaced-scaffold na na CAAJGN030000034.1 <> na Primary Assembly 50032 na contig35 unplaced-scaffold na na CAAJGN030000035.1 <> na Primary Assembly 50373 na contig36 unplaced-scaffold na na CAAJGN030000036.1 <> na Primary Assembly 49999 na contig37 unplaced-scaffold na na CAAJGN030000037.1 <> na Primary Assembly 50025 na contig38 unplaced-scaffold na na CAAJGN030000038.1 <> na Primary Assembly 50167 na contig39 unplaced-scaffold na na CAAJGN030000039.1 <> na Primary Assembly 50000 na contig40 unplaced-scaffold na na CAAJGN030000040.1 <> na Primary Assembly 50001 na contig41 unplaced-scaffold na na CAAJGN030000041.1 <> na Primary Assembly 50041 na contig42 unplaced-scaffold na na CAAJGN030000042.1 <> na Primary Assembly 50222 na contig43 unplaced-scaffold na na CAAJGN030000043.1 <> na Primary Assembly 49979 na contig44 unplaced-scaffold na na CAAJGN030000044.1 <> na Primary Assembly 50033 na contig45 unplaced-scaffold na na CAAJGN030000045.1 <> na Primary Assembly 50114 na contig46 unplaced-scaffold na na CAAJGN030000046.1 <> na Primary Assembly 49949 na contig47 unplaced-scaffold na na CAAJGN030000047.1 <> na Primary Assembly 50175 na contig48 unplaced-scaffold na na CAAJGN030000048.1 <> na Primary Assembly 49596 na contig49 unplaced-scaffold na na CAAJGN030000049.1 <> na Primary Assembly 45360 na contig50 unplaced-scaffold na na CAAJGN030000050.1 <> na Primary Assembly 44590 na contig51 unplaced-scaffold na na CAAJGN030000051.1 <> na Primary Assembly 43349 na contig52 unplaced-scaffold na na CAAJGN030000052.1 <> na Primary Assembly 42007 na contig53 unplaced-scaffold na na CAAJGN030000053.1 <> na Primary Assembly 41911 na contig54 unplaced-scaffold na na CAAJGN030000054.1 <> na Primary Assembly 41550 na contig55 unplaced-scaffold na na CAAJGN030000055.1 <> na Primary Assembly 38939 na contig56 unplaced-scaffold na na CAAJGN030000056.1 <> na Primary Assembly 38198 na contig57 unplaced-scaffold na na CAAJGN030000057.1 <> na Primary Assembly 37981 na contig58 unplaced-scaffold na na CAAJGN030000058.1 <> na Primary Assembly 34550 na contig59 unplaced-scaffold na na CAAJGN030000059.1 <> na Primary Assembly 33003 na contig60 unplaced-scaffold na na CAAJGN030000060.1 <> na Primary Assembly 28435 na contig61 unplaced-scaffold na na CAAJGN030000061.1 <> na Primary Assembly 27229 na contig62 unplaced-scaffold na na CAAJGN030000062.1 <> na Primary Assembly 1821850 na contig63 unplaced-scaffold na na CAAJGN030000063.1 <> na Primary Assembly 1663156 na contig64 unplaced-scaffold na na CAAJGN030000064.1 <> na Primary Assembly 709685 na contig65 unplaced-scaffold na na CAAJGN030000065.1 <> na Primary Assembly 593852 na contig66 unplaced-scaffold na na CAAJGN030000066.1 <> na Primary Assembly 495635 na contig67 unplaced-scaffold na na CAAJGN030000067.1 <> na Primary Assembly 488475 na contig68 unplaced-scaffold na na CAAJGN030000068.1 <> na Primary Assembly 424119 na contig69 unplaced-scaffold na na CAAJGN030000069.1 <> na Primary Assembly 392854 na contig70 unplaced-scaffold na na CAAJGN030000070.1 <> na Primary Assembly 270242 na contig71 unplaced-scaffold na na CAAJGN030000071.1 <> na Primary Assembly 255904 na contig72 unplaced-scaffold na na CAAJGN030000072.1 <> na Primary Assembly 254385 na contig73 unplaced-scaffold na na CAAJGN030000073.1 <> na Primary Assembly 236423 na contig74 unplaced-scaffold na na CAAJGN030000074.1 <> na Primary Assembly 211741 na contig75 unplaced-scaffold na na CAAJGN030000075.1 <> na Primary Assembly 186832 na contig76 unplaced-scaffold na na CAAJGN030000076.1 <> na Primary Assembly 151935 na contig77 unplaced-scaffold na na CAAJGN030000077.1 <> na Primary Assembly 151188 na contig78 unplaced-scaffold na na CAAJGN030000078.1 <> na Primary Assembly 145393 na contig79 unplaced-scaffold na na CAAJGN030000079.1 <> na Primary Assembly 132468 na contig80 unplaced-scaffold na na CAAJGN030000080.1 <> na Primary Assembly 127178 na contig81 unplaced-scaffold na na CAAJGN030000081.1 <> na Primary Assembly 119523 na contig82 unplaced-scaffold na na CAAJGN030000082.1 <> na Primary Assembly 113683 na contig83 unplaced-scaffold na na CAAJGN030000083.1 <> na Primary Assembly 113094 na contig84 unplaced-scaffold na na CAAJGN030000084.1 <> na Primary Assembly 113173 na contig85 unplaced-scaffold na na CAAJGN030000085.1 <> na Primary Assembly 112587 na contig86 unplaced-scaffold na na CAAJGN030000086.1 <> na Primary Assembly 104956 na contig87 unplaced-scaffold na na CAAJGN030000087.1 <> na Primary Assembly 99329 na contig88 unplaced-scaffold na na CAAJGN030000088.1 <> na Primary Assembly 98866 na contig89 unplaced-scaffold na na CAAJGN030000089.1 <> na Primary Assembly 97924 na contig90 unplaced-scaffold na na CAAJGN030000090.1 <> na Primary Assembly 90775 na contig91 unplaced-scaffold na na CAAJGN030000091.1 <> na Primary Assembly 90358 na contig92 unplaced-scaffold na na CAAJGN030000092.1 <> na Primary Assembly 89859 na contig93 unplaced-scaffold na na CAAJGN030000093.1 <> na Primary Assembly 87595 na contig94 unplaced-scaffold na na CAAJGN030000094.1 <> na Primary Assembly 83211 na contig95 unplaced-scaffold na na CAAJGN030000095.1 <> na Primary Assembly 83133 na contig96 unplaced-scaffold na na CAAJGN030000096.1 <> na Primary Assembly 83591 na contig97 unplaced-scaffold na na CAAJGN030000097.1 <> na Primary Assembly 82099 na contig98 unplaced-scaffold na na CAAJGN030000098.1 <> na Primary Assembly 79239 na contig99 unplaced-scaffold na na CAAJGN030000099.1 <> na Primary Assembly 76320 na contig100 unplaced-scaffold na na CAAJGN030000100.1 <> na Primary Assembly 76206 na contig101 unplaced-scaffold na na CAAJGN030000101.1 <> na Primary Assembly 75961 na contig102 unplaced-scaffold na na CAAJGN030000102.1 <> na Primary Assembly 71604 na contig103 unplaced-scaffold na na CAAJGN030000103.1 <> na Primary Assembly 71650 na contig104 unplaced-scaffold na na CAAJGN030000104.1 <> na Primary Assembly 68315 na contig105 unplaced-scaffold na na CAAJGN030000105.1 <> na Primary Assembly 68396 na scaffold_MT assembled-molecule MT Mitochondrion OD909576.1 <> na non-nuclear 16448 na