# Assembly name: CBA_J_v3 # Organism name: Mus musculus (house mouse) # Taxid: 10090 # BioSample: SAMEA9544184 # BioProject: PRJEB47108 # Submitter: EMBL-EBI, WELLCOME TRUST GENOME CAMPUS, CAMBRIDGE # Date: 2022-06-30 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAKLHN02 # Genome coverage: 40x # GenBank assembly accession: GCA_921998905.2 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_921998904.2 Primary Assembly ## GCA_921998906.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name CBA_J#1#chr1 assembled-molecule 1 Chromosome OW971573.1 <> na Primary Assembly 192364876 na CBA_J#1#chr2 assembled-molecule 2 Chromosome OW971574.1 <> na Primary Assembly 176197552 na CBA_J#1#chr3 assembled-molecule 3 Chromosome OW971575.1 <> na Primary Assembly 156858473 na CBA_J#1#chr4 assembled-molecule 4 Chromosome OW971577.1 <> na Primary Assembly 149063713 na CBA_J#1#chr5 assembled-molecule 5 Chromosome OW971578.1 <> na Primary Assembly 146242633 na CBA_J#1#chr6 assembled-molecule 6 Chromosome OW971579.1 <> na Primary Assembly 146059117 na CBA_J#1#chr7 assembled-molecule 7 Chromosome OW971580.1 <> na Primary Assembly 133130997 na CBA_J#1#chr8 assembled-molecule 8 Chromosome OW971582.1 <> na Primary Assembly 124545761 na CBA_J#1#chr9 assembled-molecule 9 Chromosome OW971583.1 <> na Primary Assembly 121272610 na CBA_J#1#chr10 assembled-molecule 10 Chromosome OW971581.1 <> na Primary Assembly 126990816 na CBA_J#1#chr11 assembled-molecule 11 Chromosome OW971584.1 <> na Primary Assembly 118879422 na CBA_J#1#chr12 assembled-molecule 12 Chromosome OW971587.1 <> na Primary Assembly 113223586 na CBA_J#1#chr13 assembled-molecule 13 Chromosome OW971585.1 <> na Primary Assembly 115145956 na CBA_J#1#chr14 assembled-molecule 14 Chromosome OW971586.1 <> na Primary Assembly 114128786 na CBA_J#1#chr15 assembled-molecule 15 Chromosome OW971588.1 <> na Primary Assembly 101027690 na CBA_J#1#chr16 assembled-molecule 16 Chromosome OW971589.1 <> na Primary Assembly 94914950 na CBA_J#1#chr17 assembled-molecule 17 Chromosome OW971590.1 <> na Primary Assembly 90677210 na CBA_J#1#chr18 assembled-molecule 18 Chromosome OW971591.1 <> na Primary Assembly 87962897 na CBA_J#1#chr19 assembled-molecule 19 Chromosome OW971592.1 <> na Primary Assembly 58010470 na CBA_J#1#chrX assembled-molecule X Chromosome OW971576.1 <> na Primary Assembly 148887589 na CBA_J#1#chr1_unloc_1 unplaced-scaffold na na CAKLHN020000001.1 <> na Primary Assembly 151260 na CBA_J#1#chr2_unloc_1 unplaced-scaffold na na CAKLHN020000002.1 <> na Primary Assembly 100017 na CBA_J#1#chrX_unloc_1 unplaced-scaffold na na CAKLHN020000003.1 <> na Primary Assembly 126959 na CBA_J#1#chrX_unloc_2 unplaced-scaffold na na CAKLHN020000004.1 <> na Primary Assembly 105384 na CBA_J#1#chrX_unloc_3 unplaced-scaffold na na CAKLHN020000005.1 <> na Primary Assembly 76067 na CBA_J#1#chr5_unloc_1 unplaced-scaffold na na CAKLHN020000006.1 <> na Primary Assembly 56733 na CBA_J#1#chr5_unloc_2 unplaced-scaffold na na CAKLHN020000007.1 <> na Primary Assembly 53731 na CBA_J#1#chr5_unloc_3 unplaced-scaffold na na CAKLHN020000008.1 <> na Primary Assembly 51775 na CBA_J#1#chr5_unloc_4 unplaced-scaffold na na CAKLHN020000009.1 <> na Primary Assembly 34014 na CBA_J#1#chr7_unloc_1 unplaced-scaffold na na CAKLHN020000010.1 <> na Primary Assembly 80417 na CBA_J#1#chr7_unloc_2 unplaced-scaffold na na CAKLHN020000011.1 <> na Primary Assembly 67470 na CBA_J#1#chr10_unloc_1 unplaced-scaffold na na CAKLHN020000012.1 <> na Primary Assembly 80024 na CBA_J#1#chr8_unloc_1 unplaced-scaffold na na CAKLHN020000013.1 <> na Primary Assembly 120346 na CBA_J#1#chr13_unloc_1 unplaced-scaffold na na CAKLHN020000014.1 <> na Primary Assembly 65290 na CBA_J#1#53 unplaced-scaffold na na CAKLHN020000015.1 <> na Primary Assembly 12335 na CBA_J#1#97 unplaced-scaffold na na CAKLHN020000016.1 <> na Primary Assembly 30869 na CBA_J#1#122 unplaced-scaffold na na CAKLHN020000017.1 <> na Primary Assembly 61354 na CBA_J#1#105 unplaced-scaffold na na CAKLHN020000018.1 <> na Primary Assembly 14901 na CBA_J#1#124 unplaced-scaffold na na CAKLHN020000019.1 <> na Primary Assembly 29728 na CBA_J#1#52 unplaced-scaffold na na CAKLHN020000020.1 <> na Primary Assembly 10309 na CBA_J#1#60 unplaced-scaffold na na CAKLHN020000021.1 <> na Primary Assembly 43703 na CBA_J#1#59 unplaced-scaffold na na CAKLHN020000022.1 <> na Primary Assembly 71236 na CBA_J#1#44 unplaced-scaffold na na CAKLHN020000023.1 <> na Primary Assembly 11218 na CBA_J#1#132 unplaced-scaffold na na CAKLHN020000024.1 <> na Primary Assembly 27150 na CBA_J#1#41 unplaced-scaffold na na CAKLHN020000025.1 <> na Primary Assembly 34592 na CBA_J#1#136 unplaced-scaffold na na CAKLHN020000026.1 <> na Primary Assembly 43041 na CBA_J#1#48 unplaced-scaffold na na CAKLHN020000027.1 <> na Primary Assembly 18945 na CBA_J#1#110 unplaced-scaffold na na CAKLHN020000028.1 <> na Primary Assembly 19296 na CBA_J#1#95 unplaced-scaffold na na CAKLHN020000029.1 <> na Primary Assembly 81419 na CBA_J#1#126 unplaced-scaffold na na CAKLHN020000030.1 <> na Primary Assembly 17699 na CBA_J#1#72 unplaced-scaffold na na CAKLHN020000031.1 <> na Primary Assembly 21814 na CBA_J#1#79 unplaced-scaffold na na CAKLHN020000032.1 <> na Primary Assembly 13608 na CBA_J#1#65 unplaced-scaffold na na CAKLHN020000033.1 <> na Primary Assembly 69038 na CBA_J#1#123 unplaced-scaffold na na CAKLHN020000034.1 <> na Primary Assembly 26842 na CBA_J#1#73 unplaced-scaffold na na CAKLHN020000035.1 <> na Primary Assembly 32103 na CBA_J#1#133 unplaced-scaffold na na CAKLHN020000036.1 <> na Primary Assembly 13505 na CBA_J#1#89 unplaced-scaffold na na CAKLHN020000037.1 <> na Primary Assembly 23701 na CBA_J#1#141 unplaced-scaffold na na CAKLHN020000038.1 <> na Primary Assembly 58875 na CBA_J#1#82 unplaced-scaffold na na CAKLHN020000039.1 <> na Primary Assembly 27737 na CBA_J#1#108 unplaced-scaffold na na CAKLHN020000040.1 <> na Primary Assembly 40524 na CBA_J#1#90 unplaced-scaffold na na CAKLHN020000041.1 <> na Primary Assembly 25292 na CBA_J#1#67 unplaced-scaffold na na CAKLHN020000042.1 <> na Primary Assembly 19473 na CBA_J#1#83 unplaced-scaffold na na CAKLHN020000043.1 <> na Primary Assembly 14579 na CBA_J#1#54 unplaced-scaffold na na CAKLHN020000044.1 <> na Primary Assembly 13358 na CBA_J#1#49 unplaced-scaffold na na CAKLHN020000045.1 <> na Primary Assembly 37372 na CBA_J#1#42 unplaced-scaffold na na CAKLHN020000046.1 <> na Primary Assembly 11957 na CBA_J#1#130 unplaced-scaffold na na CAKLHN020000047.1 <> na Primary Assembly 18827 na CBA_J#1#116 unplaced-scaffold na na CAKLHN020000048.1 <> na Primary Assembly 15214 na CBA_J#1#56 unplaced-scaffold na na CAKLHN020000049.1 <> na Primary Assembly 237883 na CBA_J#1#144 unplaced-scaffold na na CAKLHN020000050.1 <> na Primary Assembly 38069 na CBA_J#1#142 unplaced-scaffold na na CAKLHN020000051.1 <> na Primary Assembly 157750 na CBA_J#1#43 unplaced-scaffold na na CAKLHN020000052.1 <> na Primary Assembly 17266 na CBA_J#1#112 unplaced-scaffold na na CAKLHN020000053.1 <> na Primary Assembly 18917 na CBA_J#1#114 unplaced-scaffold na na CAKLHN020000054.1 <> na Primary Assembly 16462 na CBA_J#1#109 unplaced-scaffold na na CAKLHN020000055.1 <> na Primary Assembly 17505 na CBA_J#1#25 unplaced-scaffold na na CAKLHN020000056.1 <> na Primary Assembly 35727 na CBA_J#1#51 unplaced-scaffold na na CAKLHN020000057.1 <> na Primary Assembly 18290 na CBA_J#1#76 unplaced-scaffold na na CAKLHN020000058.1 <> na Primary Assembly 98164 na CBA_J#1#37 unplaced-scaffold na na CAKLHN020000059.1 <> na Primary Assembly 56453 na CBA_J#1#81 unplaced-scaffold na na CAKLHN020000060.1 <> na Primary Assembly 18455 na CBA_J#1#74 unplaced-scaffold na na CAKLHN020000061.1 <> na Primary Assembly 15905 na CBA_J#1#88 unplaced-scaffold na na CAKLHN020000062.1 <> na Primary Assembly 22213 na CBA_J#1#143 unplaced-scaffold na na CAKLHN020000063.1 <> na Primary Assembly 15147 na CBA_J#1#113 unplaced-scaffold na na CAKLHN020000064.1 <> na Primary Assembly 34401 na CBA_J#1#131 unplaced-scaffold na na CAKLHN020000065.1 <> na Primary Assembly 123675 na CBA_J#1#86 unplaced-scaffold na na CAKLHN020000066.1 <> na Primary Assembly 18928 na CBA_J#1#71 unplaced-scaffold na na CAKLHN020000067.1 <> na Primary Assembly 23348 na CBA_J#1#35 unplaced-scaffold na na CAKLHN020000068.1 <> na Primary Assembly 103634 na CBA_J#1#84 unplaced-scaffold na na CAKLHN020000069.1 <> na Primary Assembly 10729 na CBA_J#1#121 unplaced-scaffold na na CAKLHN020000070.1 <> na Primary Assembly 39115 na CBA_J#1#78 unplaced-scaffold na na CAKLHN020000071.1 <> na Primary Assembly 45703 na CBA_J#1#57 unplaced-scaffold na na CAKLHN020000072.1 <> na Primary Assembly 15972 na CBA_J#1#93 unplaced-scaffold na na CAKLHN020000073.1 <> na Primary Assembly 33573 na CBA_J#1#138 unplaced-scaffold na na CAKLHN020000074.1 <> na Primary Assembly 11478 na CBA_J#1#26 unplaced-scaffold na na CAKLHN020000075.1 <> na Primary Assembly 20237 na CBA_J#1#128 unplaced-scaffold na na CAKLHN020000076.1 <> na Primary Assembly 19321 na CBA_J#1#80 unplaced-scaffold na na CAKLHN020000077.1 <> na Primary Assembly 14005 na CBA_J#1#92 unplaced-scaffold na na CAKLHN020000078.1 <> na Primary Assembly 140506 na CBA_J#1#99 unplaced-scaffold na na CAKLHN020000079.1 <> na Primary Assembly 15745 na CBA_J#1#117 unplaced-scaffold na na CAKLHN020000080.1 <> na Primary Assembly 38023 na CBA_J#1#70 unplaced-scaffold na na CAKLHN020000081.1 <> na Primary Assembly 33840 na CBA_J#1#55 unplaced-scaffold na na CAKLHN020000082.1 <> na Primary Assembly 10036 na CBA_J#1#28 unplaced-scaffold na na CAKLHN020000083.1 <> na Primary Assembly 12433 na CBA_J#1#103 unplaced-scaffold na na CAKLHN020000084.1 <> na Primary Assembly 10985 na CBA_J#1#85 unplaced-scaffold na na CAKLHN020000085.1 <> na Primary Assembly 14327 na CBA_J#1#106 unplaced-scaffold na na CAKLHN020000086.1 <> na Primary Assembly 80589 na CBA_J#1#77 unplaced-scaffold na na CAKLHN020000087.1 <> na Primary Assembly 19908 na CBA_J#1#36 unplaced-scaffold na na CAKLHN020000088.1 <> na Primary Assembly 10995 na CBA_J#1#69 unplaced-scaffold na na CAKLHN020000089.1 <> na Primary Assembly 27232 na CBA_J#1#62 unplaced-scaffold na na CAKLHN020000090.1 <> na Primary Assembly 32360 na CBA_J#1#50 unplaced-scaffold na na CAKLHN020000091.1 <> na Primary Assembly 22428 na CBA_J#1#75 unplaced-scaffold na na CAKLHN020000092.1 <> na Primary Assembly 12365 na CBA_J#1#135 unplaced-scaffold na na CAKLHN020000093.1 <> na Primary Assembly 12449 na CBA_J#1#38 unplaced-scaffold na na CAKLHN020000094.1 <> na Primary Assembly 14906 na CBA_J#1#87 unplaced-scaffold na na CAKLHN020000095.1 <> na Primary Assembly 70344 na CBA_J#1#63 unplaced-scaffold na na CAKLHN020000096.1 <> na Primary Assembly 16484 na CBA_J#1#125 unplaced-scaffold na na CAKLHN020000097.1 <> na Primary Assembly 16353 na CBA_J#1#119 unplaced-scaffold na na CAKLHN020000098.1 <> na Primary Assembly 32083 na CBA_J#1#104 unplaced-scaffold na na CAKLHN020000099.1 <> na Primary Assembly 59441 na CBA_J#1#94 unplaced-scaffold na na CAKLHN020000100.1 <> na Primary Assembly 83690 na CBA_J#1#101 unplaced-scaffold na na CAKLHN020000101.1 <> na Primary Assembly 71159 na CBA_J#1#22 unplaced-scaffold na na CAKLHN020000102.1 <> na Primary Assembly 93968 na CBA_J#1#127 unplaced-scaffold na na CAKLHN020000103.1 <> na Primary Assembly 16576 na CBA_J#1#29 unplaced-scaffold na na CAKLHN020000104.1 <> na Primary Assembly 26373 na CBA_J#1#96 unplaced-scaffold na na CAKLHN020000105.1 <> na Primary Assembly 14314 na CBA_J#1#23 unplaced-scaffold na na CAKLHN020000106.1 <> na Primary Assembly 18744 na CBA_J#1#47 unplaced-scaffold na na CAKLHN020000107.1 <> na Primary Assembly 63790 na CBA_J#1#137 unplaced-scaffold na na CAKLHN020000108.1 <> na Primary Assembly 31333 na CBA_J#1#45 unplaced-scaffold na na CAKLHN020000109.1 <> na Primary Assembly 11735 na CBA_J#1#98 unplaced-scaffold na na CAKLHN020000110.1 <> na Primary Assembly 20420 na CBA_J#1#118 unplaced-scaffold na na CAKLHN020000111.1 <> na Primary Assembly 25520 na CBA_J#1#91 unplaced-scaffold na na CAKLHN020000112.1 <> na Primary Assembly 11664 na CBA_J#1#139 unplaced-scaffold na na CAKLHN020000113.1 <> na Primary Assembly 23734 na CBA_J#1#33 unplaced-scaffold na na CAKLHN020000114.1 <> na Primary Assembly 15490 na CBA_J#1#61 unplaced-scaffold na na CAKLHN020000115.1 <> na Primary Assembly 10688 na CBA_J#1#39 unplaced-scaffold na na CAKLHN020000116.1 <> na Primary Assembly 13449 na CBA_J#1#32 unplaced-scaffold na na CAKLHN020000117.1 <> na Primary Assembly 21915 na CBA_J#1#68 unplaced-scaffold na na CAKLHN020000118.1 <> na Primary Assembly 68165 na CBA_J#1#66 unplaced-scaffold na na CAKLHN020000119.1 <> na Primary Assembly 11832 na CBA_J#1#145 unplaced-scaffold na na CAKLHN020000120.1 <> na Primary Assembly 21953 na CBA_J#1#64 unplaced-scaffold na na CAKLHN020000121.1 <> na Primary Assembly 20269 na CBA_J#1#40 unplaced-scaffold na na CAKLHN020000122.1 <> na Primary Assembly 21852 na CBA_J#1#MT assembled-molecule MIT Mitochondrion OW971593.1 <> na non-nuclear 16300 na