# Assembly name: kaTriClin1.1 # Organism name: Trididemnum clinides (tunicates) # Taxid: 641091 # BioSample: SAMEA9873882 # BioProject: PRJEB69604 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2023-12-07 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAVLYW01 # Assembly method: various # Genome coverage: 27x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_963675345.1 # Linked assembly: GCA_963675475.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_963675344.1 Primary Assembly ## GCA_963675346.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OY776284.1 <> na Primary Assembly 62078107 na SUPER_2 assembled-molecule 2 Chromosome OY776285.1 <> na Primary Assembly 54020906 na SUPER_3 assembled-molecule 3 Chromosome OY776286.1 <> na Primary Assembly 45324739 na SUPER_4 assembled-molecule 4 Chromosome OY776287.1 <> na Primary Assembly 42109513 na SUPER_5 assembled-molecule 5 Chromosome OY776288.1 <> na Primary Assembly 41037356 na SUPER_6 assembled-molecule 6 Chromosome OY776289.1 <> na Primary Assembly 40034467 na SUPER_7 assembled-molecule 7 Chromosome OY776290.1 <> na Primary Assembly 39834007 na SUPER_8 assembled-molecule 8 Chromosome OY776291.1 <> na Primary Assembly 39502731 na SUPER_9 assembled-molecule 9 Chromosome OY776292.1 <> na Primary Assembly 39455279 na SUPER_10 assembled-molecule 10 Chromosome OY776293.1 <> na Primary Assembly 38462795 na SUPER_11 assembled-molecule 11 Chromosome OY776294.1 <> na Primary Assembly 38013173 na SUPER_12 assembled-molecule 12 Chromosome OY776295.1 <> na Primary Assembly 37532179 na SUPER_13 assembled-molecule 13 Chromosome OY776296.1 <> na Primary Assembly 36457513 na SUPER_14 assembled-molecule 14 Chromosome OY776297.1 <> na Primary Assembly 36042423 na SUPER_15 assembled-molecule 15 Chromosome OY776298.1 <> na Primary Assembly 35995779 na SUPER_16 assembled-molecule 16 Chromosome OY776299.1 <> na Primary Assembly 35058691 na SUPER_17 assembled-molecule 17 Chromosome OY776300.1 <> na Primary Assembly 33926995 na SUPER_18 assembled-molecule 18 Chromosome OY776301.1 <> na Primary Assembly 33613481 na SUPER_19 assembled-molecule 19 Chromosome OY776302.1 <> na Primary Assembly 33307140 na SUPER_20 assembled-molecule 20 Chromosome OY776303.1 <> na Primary Assembly 32947472 na SUPER_21 assembled-molecule 21 Chromosome OY776304.1 <> na Primary Assembly 32232534 na SUPER_22 assembled-molecule 22 Chromosome OY776305.1 <> na Primary Assembly 31162863 na SUPER_23 assembled-molecule 23 Chromosome OY776306.1 <> na Primary Assembly 29144796 na SCAFFOLD_295 unplaced-scaffold na na CAVLYW010000001.1 <> na Primary Assembly 24418 na SCAFFOLD_65 unplaced-scaffold na na CAVLYW010000002.1 <> na Primary Assembly 363272 na SCAFFOLD_138 unplaced-scaffold na na CAVLYW010000003.1 <> na Primary Assembly 85449 na SCAFFOLD_159 unplaced-scaffold na na CAVLYW010000004.1 <> na Primary Assembly 65156 na SCAFFOLD_143 unplaced-scaffold na na CAVLYW010000005.1 <> na Primary Assembly 76815 na SCAFFOLD_183 unplaced-scaffold na na CAVLYW010000006.1 <> na Primary Assembly 52000 na SCAFFOLD_411 unplaced-scaffold na na CAVLYW010000007.1 <> na Primary Assembly 1000 na SCAFFOLD_156 unplaced-scaffold na na CAVLYW010000008.1 <> na Primary Assembly 66315 na SCAFFOLD_131 unplaced-scaffold na na CAVLYW010000009.1 <> na Primary Assembly 89849 na SCAFFOLD_165 unplaced-scaffold na na CAVLYW010000010.1 <> na Primary Assembly 60326 na SCAFFOLD_54 unplaced-scaffold na na CAVLYW010000011.1 <> na Primary Assembly 438000 na SCAFFOLD_83 unplaced-scaffold na na CAVLYW010000012.1 <> na Primary Assembly 258842 na SCAFFOLD_115 unplaced-scaffold na na CAVLYW010000013.1 <> na Primary Assembly 121459 na SCAFFOLD_38 unplaced-scaffold na na CAVLYW010000014.1 <> na Primary Assembly 866070 na SCAFFOLD_340 unplaced-scaffold na na CAVLYW010000015.1 <> na Primary Assembly 19000 na SCAFFOLD_125 unplaced-scaffold na na CAVLYW010000016.1 <> na Primary Assembly 96896 na SCAFFOLD_282 unplaced-scaffold na na CAVLYW010000017.1 <> na Primary Assembly 25814 na SCAFFOLD_242 unplaced-scaffold na na CAVLYW010000018.1 <> na Primary Assembly 32966 na SCAFFOLD_277 unplaced-scaffold na na CAVLYW010000019.1 <> na Primary Assembly 26196 na SCAFFOLD_413 unplaced-scaffold na na CAVLYW010000020.1 <> na Primary Assembly 1000 na SCAFFOLD_403 unplaced-scaffold na na CAVLYW010000021.1 <> na Primary Assembly 3000 na SCAFFOLD_157 unplaced-scaffold na na CAVLYW010000022.1 <> na Primary Assembly 66029 na SCAFFOLD_181 unplaced-scaffold na na CAVLYW010000023.1 <> na Primary Assembly 52332 na SCAFFOLD_77 unplaced-scaffold na na CAVLYW010000024.1 <> na Primary Assembly 312436 na SCAFFOLD_374 unplaced-scaffold na na CAVLYW010000025.1 <> na Primary Assembly 13438 na SCAFFOLD_98 unplaced-scaffold na na CAVLYW010000026.1 <> na Primary Assembly 175687 na SCAFFOLD_190 unplaced-scaffold na na CAVLYW010000027.1 <> na Primary Assembly 48240 na SCAFFOLD_153 unplaced-scaffold na na CAVLYW010000028.1 <> na Primary Assembly 69887 na SCAFFOLD_93 unplaced-scaffold na na CAVLYW010000029.1 <> na Primary Assembly 219685 na SCAFFOLD_189 unplaced-scaffold na na CAVLYW010000030.1 <> na Primary Assembly 49186 na SCAFFOLD_252 unplaced-scaffold na na CAVLYW010000031.1 <> na Primary Assembly 31000 na SCAFFOLD_350 unplaced-scaffold na na CAVLYW010000032.1 <> na Primary Assembly 18053 na SCAFFOLD_172 unplaced-scaffold na na CAVLYW010000033.1 <> na Primary Assembly 56082 na SCAFFOLD_210 unplaced-scaffold na na CAVLYW010000034.1 <> na Primary Assembly 41487 na SCAFFOLD_322 unplaced-scaffold na na CAVLYW010000035.1 <> na Primary Assembly 21004 na SCAFFOLD_137 unplaced-scaffold na na CAVLYW010000036.1 <> na Primary Assembly 85876 na SCAFFOLD_260 unplaced-scaffold na na CAVLYW010000037.1 <> na Primary Assembly 29539 na SCAFFOLD_416 unplaced-scaffold na na CAVLYW010000038.1 <> na Primary Assembly 1000 na SCAFFOLD_406 unplaced-scaffold na na CAVLYW010000039.1 <> na Primary Assembly 2000 na SCAFFOLD_147 unplaced-scaffold na na CAVLYW010000040.1 <> na Primary Assembly 74874 na SCAFFOLD_187 unplaced-scaffold na na CAVLYW010000041.1 <> na Primary Assembly 50000 na SCAFFOLD_271 unplaced-scaffold na na CAVLYW010000042.1 <> na Primary Assembly 27822 na SCAFFOLD_37 unplaced-scaffold na na CAVLYW010000043.1 <> na Primary Assembly 949187 na SCAFFOLD_385 unplaced-scaffold na na CAVLYW010000044.1 <> na Primary Assembly 10601 na SCAFFOLD_334 unplaced-scaffold na na CAVLYW010000045.1 <> na Primary Assembly 19602 na SCAFFOLD_100 unplaced-scaffold na na CAVLYW010000046.1 <> na Primary Assembly 170268 na SCAFFOLD_160 unplaced-scaffold na na CAVLYW010000047.1 <> na Primary Assembly 64720 na SCAFFOLD_335 unplaced-scaffold na na CAVLYW010000048.1 <> na Primary Assembly 19582 na SCAFFOLD_344 unplaced-scaffold na na CAVLYW010000049.1 <> na Primary Assembly 18726 na SCAFFOLD_87 unplaced-scaffold na na CAVLYW010000050.1 <> na Primary Assembly 249200 na SCAFFOLD_287 unplaced-scaffold na na CAVLYW010000051.1 <> na Primary Assembly 25143 na SCAFFOLD_239 unplaced-scaffold na na CAVLYW010000052.1 <> na Primary Assembly 33751 na SCAFFOLD_258 unplaced-scaffold na na CAVLYW010000053.1 <> na Primary Assembly 29800 na SCAFFOLD_308 unplaced-scaffold na na CAVLYW010000054.1 <> na Primary Assembly 22604 na SCAFFOLD_48 unplaced-scaffold na na CAVLYW010000055.1 <> na Primary Assembly 560418 na SCAFFOLD_44 unplaced-scaffold na na CAVLYW010000056.1 <> na Primary Assembly 617504 na SCAFFOLD_289 unplaced-scaffold na na CAVLYW010000057.1 <> na Primary Assembly 24811 na SCAFFOLD_249 unplaced-scaffold na na CAVLYW010000058.1 <> na Primary Assembly 31734 na SCAFFOLD_286 unplaced-scaffold na na CAVLYW010000059.1 <> na Primary Assembly 25314 na SCAFFOLD_246 unplaced-scaffold na na CAVLYW010000060.1 <> na Primary Assembly 32585 na SCAFFOLD_182 unplaced-scaffold na na CAVLYW010000061.1 <> na Primary Assembly 52271 na SCAFFOLD_241 unplaced-scaffold na na CAVLYW010000062.1 <> na Primary Assembly 33358 na SCAFFOLD_317 unplaced-scaffold na na CAVLYW010000063.1 <> na Primary Assembly 21794 na SCAFFOLD_177 unplaced-scaffold na na CAVLYW010000064.1 <> na Primary Assembly 53646 na SCAFFOLD_214 unplaced-scaffold na na CAVLYW010000065.1 <> na Primary Assembly 39783 na SCAFFOLD_204 unplaced-scaffold na na CAVLYW010000066.1 <> na Primary Assembly 43299 na SCAFFOLD_132 unplaced-scaffold na na CAVLYW010000067.1 <> na Primary Assembly 88640 na SCAFFOLD_75 unplaced-scaffold na na CAVLYW010000068.1 <> na Primary Assembly 314291 na SCAFFOLD_97 unplaced-scaffold na na CAVLYW010000069.1 <> na Primary Assembly 179467 na SCAFFOLD_369 unplaced-scaffold na na CAVLYW010000070.1 <> na Primary Assembly 14691 na SCAFFOLD_194 unplaced-scaffold na na CAVLYW010000071.1 <> na Primary Assembly 44918 na SCAFFOLD_366 unplaced-scaffold na na CAVLYW010000072.1 <> na Primary Assembly 15737 na SCAFFOLD_256 unplaced-scaffold na na CAVLYW010000073.1 <> na Primary Assembly 30787 na SCAFFOLD_319 unplaced-scaffold na na CAVLYW010000074.1 <> na Primary Assembly 21284 na SCAFFOLD_329 unplaced-scaffold na na CAVLYW010000075.1 <> na Primary Assembly 20000 na SCAFFOLD_316 unplaced-scaffold na na CAVLYW010000076.1 <> na Primary Assembly 22026 na SCAFFOLD_238 unplaced-scaffold na na CAVLYW010000077.1 <> na Primary Assembly 33866 na SCAFFOLD_326 unplaced-scaffold na na CAVLYW010000078.1 <> na Primary Assembly 20121 na SCAFFOLD_306 unplaced-scaffold na na CAVLYW010000079.1 <> na Primary Assembly 22776 na SCAFFOLD_162 unplaced-scaffold na na CAVLYW010000080.1 <> na Primary Assembly 63517 na SCAFFOLD_198 unplaced-scaffold na na CAVLYW010000081.1 <> na Primary Assembly 43858 na SCAFFOLD_102 unplaced-scaffold na na CAVLYW010000082.1 <> na Primary Assembly 163843 na SCAFFOLD_112 unplaced-scaffold na na CAVLYW010000083.1 <> na Primary Assembly 130000 na SCAFFOLD_211 unplaced-scaffold na na CAVLYW010000084.1 <> na Primary Assembly 40365 na SCAFFOLD_201 unplaced-scaffold na na CAVLYW010000085.1 <> na Primary Assembly 43593 na SCAFFOLD_387 unplaced-scaffold na na CAVLYW010000086.1 <> na Primary Assembly 10000 na SCAFFOLD_347 unplaced-scaffold na na CAVLYW010000087.1 <> na Primary Assembly 18260 na SCAFFOLD_351 unplaced-scaffold na na CAVLYW010000088.1 <> na Primary Assembly 18040 na SCAFFOLD_284 unplaced-scaffold na na CAVLYW010000089.1 <> na Primary Assembly 25694 na SCAFFOLD_268 unplaced-scaffold na na CAVLYW010000090.1 <> na Primary Assembly 28113 na SCAFFOLD_292 unplaced-scaffold na na CAVLYW010000091.1 <> na Primary Assembly 24579 na SCAFFOLD_390 unplaced-scaffold na na CAVLYW010000092.1 <> na Primary Assembly 8341 na SCAFFOLD_336 unplaced-scaffold na na CAVLYW010000093.1 <> na Primary Assembly 19422 na SCAFFOLD_218 unplaced-scaffold na na CAVLYW010000094.1 <> na Primary Assembly 38829 na SCAFFOLD_89 unplaced-scaffold na na CAVLYW010000095.1 <> na Primary Assembly 244114 na SCAFFOLD_213 unplaced-scaffold na na CAVLYW010000096.1 <> na Primary Assembly 40049 na SCAFFOLD_203 unplaced-scaffold na na CAVLYW010000097.1 <> na Primary Assembly 43585 na SCAFFOLD_386 unplaced-scaffold na na CAVLYW010000098.1 <> na Primary Assembly 10097 na SCAFFOLD_346 unplaced-scaffold na na CAVLYW010000099.1 <> na Primary Assembly 18318 na SCAFFOLD_175 unplaced-scaffold na na CAVLYW010000100.1 <> na Primary Assembly 54752 na SCAFFOLD_325 unplaced-scaffold na na CAVLYW010000101.1 <> na Primary Assembly 20386 na SCAFFOLD_255 unplaced-scaffold na na CAVLYW010000102.1 <> na Primary Assembly 30803 na SCAFFOLD_331 unplaced-scaffold na na CAVLYW010000103.1 <> na Primary Assembly 19915 na SCAFFOLD_324 unplaced-scaffold na na CAVLYW010000104.1 <> na Primary Assembly 20760 na SCAFFOLD_130 unplaced-scaffold na na CAVLYW010000105.1 <> na Primary Assembly 90954 na SCAFFOLD_267 unplaced-scaffold na na CAVLYW010000106.1 <> na Primary Assembly 28150 na SCAFFOLD_254 unplaced-scaffold na na CAVLYW010000107.1 <> na Primary Assembly 30842 na SCAFFOLD_341 unplaced-scaffold na na CAVLYW010000108.1 <> na Primary Assembly 18897 na SCAFFOLD_364 unplaced-scaffold na na CAVLYW010000109.1 <> na Primary Assembly 16000 na SCAFFOLD_196 unplaced-scaffold na na CAVLYW010000110.1 <> na Primary Assembly 44626 na SCAFFOLD_76 unplaced-scaffold na na CAVLYW010000111.1 <> na Primary Assembly 312487 na SCAFFOLD_217 unplaced-scaffold na na CAVLYW010000112.1 <> na Primary Assembly 38922 na SCAFFOLD_46 unplaced-scaffold na na CAVLYW010000113.1 <> na Primary Assembly 577724 na SCAFFOLD_348 unplaced-scaffold na na CAVLYW010000114.1 <> na Primary Assembly 18151 na SCAFFOLD_410 unplaced-scaffold na na CAVLYW010000115.1 <> na Primary Assembly 1000 na SCAFFOLD_40 unplaced-scaffold na na CAVLYW010000116.1 <> na Primary Assembly 744943 na SCAFFOLD_356 unplaced-scaffold na na CAVLYW010000117.1 <> na Primary Assembly 17406 na SCAFFOLD_219 unplaced-scaffold na na CAVLYW010000118.1 <> na Primary Assembly 38471 na SCAFFOLD_209 unplaced-scaffold na na CAVLYW010000119.1 <> na Primary Assembly 42311 na SCAFFOLD_343 unplaced-scaffold na na CAVLYW010000120.1 <> na Primary Assembly 18775 na SCAFFOLD_359 unplaced-scaffold na na CAVLYW010000121.1 <> na Primary Assembly 16983 na SCAFFOLD_216 unplaced-scaffold na na CAVLYW010000122.1 <> na Primary Assembly 39032 na SCAFFOLD_338 unplaced-scaffold na na CAVLYW010000123.1 <> na Primary Assembly 19125 na SCAFFOLD_269 unplaced-scaffold na na CAVLYW010000124.1 <> na Primary Assembly 28077 na SCAFFOLD_60 unplaced-scaffold na na CAVLYW010000125.1 <> na Primary Assembly 398103 na SCAFFOLD_395 unplaced-scaffold na na CAVLYW010000126.1 <> na Primary Assembly 6000 na SCAFFOLD_96 unplaced-scaffold na na CAVLYW010000127.1 <> na Primary Assembly 190989 na SCAFFOLD_126 unplaced-scaffold na na CAVLYW010000128.1 <> na Primary Assembly 95424 na SCAFFOLD_116 unplaced-scaffold na na CAVLYW010000129.1 <> na Primary Assembly 120576 na SCAFFOLD_376 unplaced-scaffold na na CAVLYW010000130.1 <> na Primary Assembly 13000 na SCAFFOLD_129 unplaced-scaffold na na CAVLYW010000131.1 <> na Primary Assembly 91386 na SCAFFOLD_109 unplaced-scaffold na na CAVLYW010000132.1 <> na Primary Assembly 138708 na SCAFFOLD_169 unplaced-scaffold na na CAVLYW010000133.1 <> na Primary Assembly 58195 na SCAFFOLD_49 unplaced-scaffold na na CAVLYW010000134.1 <> na Primary Assembly 539414 na SCAFFOLD_240 unplaced-scaffold na na CAVLYW010000135.1 <> na Primary Assembly 33594 na SCAFFOLD_280 unplaced-scaffold na na CAVLYW010000136.1 <> na Primary Assembly 26101 na SCAFFOLD_342 unplaced-scaffold na na CAVLYW010000137.1 <> na Primary Assembly 18850 na SCAFFOLD_154 unplaced-scaffold na na CAVLYW010000138.1 <> na Primary Assembly 69605 na SCAFFOLD_274 unplaced-scaffold na na CAVLYW010000139.1 <> na Primary Assembly 27312 na SCAFFOLD_127 unplaced-scaffold na na CAVLYW010000140.1 <> na Primary Assembly 94399 na SCAFFOLD_117 unplaced-scaffold na na CAVLYW010000141.1 <> na Primary Assembly 120371 na SCAFFOLD_192 unplaced-scaffold na na CAVLYW010000142.1 <> na Primary Assembly 45908 na SCAFFOLD_378 unplaced-scaffold na na CAVLYW010000143.1 <> na Primary Assembly 12731 na SCAFFOLD_118 unplaced-scaffold na na CAVLYW010000144.1 <> na Primary Assembly 118383 na SCAFFOLD_128 unplaced-scaffold na na CAVLYW010000145.1 <> na Primary Assembly 94134 na SCAFFOLD_163 unplaced-scaffold na na CAVLYW010000146.1 <> na Primary Assembly 61070 na SCAFFOLD_103 unplaced-scaffold na na CAVLYW010000147.1 <> na Primary Assembly 160901 na SCAFFOLD_123 unplaced-scaffold na na CAVLYW010000148.1 <> na Primary Assembly 97338 na SCAFFOLD_113 unplaced-scaffold na na CAVLYW010000149.1 <> na Primary Assembly 128244 na SCAFFOLD_373 unplaced-scaffold na na CAVLYW010000150.1 <> na Primary Assembly 13982 na SCAFFOLD_56 unplaced-scaffold na na CAVLYW010000151.1 <> na Primary Assembly 410848 na SCAFFOLD_360 unplaced-scaffold na na CAVLYW010000152.1 <> na Primary Assembly 16927 na SCAFFOLD_36 unplaced-scaffold na na CAVLYW010000153.1 <> na Primary Assembly 956373 na SCAFFOLD_262 unplaced-scaffold na na CAVLYW010000154.1 <> na Primary Assembly 29317 na SCAFFOLD_52 unplaced-scaffold na na CAVLYW010000155.1 <> na Primary Assembly 460376 na SCAFFOLD_352 unplaced-scaffold na na CAVLYW010000156.1 <> na Primary Assembly 17890 na SCAFFOLD_51 unplaced-scaffold na na CAVLYW010000157.1 <> na Primary Assembly 478089 na SCAFFOLD_185 unplaced-scaffold na na CAVLYW010000158.1 <> na Primary Assembly 50951 na SCAFFOLD_300 unplaced-scaffold na na CAVLYW010000159.1 <> na Primary Assembly 24070 na SCAFFOLD_134 unplaced-scaffold na na CAVLYW010000160.1 <> na Primary Assembly 86298 na SCAFFOLD_30 unplaced-scaffold na na CAVLYW010000161.1 <> na Primary Assembly 2101116 na SCAFFOLD_293 unplaced-scaffold na na CAVLYW010000162.1 <> na Primary Assembly 24576 na SCAFFOLD_371 unplaced-scaffold na na CAVLYW010000163.1 <> na Primary Assembly 14000 na SCAFFOLD_121 unplaced-scaffold na na CAVLYW010000164.1 <> na Primary Assembly 104654 na SCAFFOLD_111 unplaced-scaffold na na CAVLYW010000165.1 <> na Primary Assembly 138285 na SCAFFOLD_80 unplaced-scaffold na na CAVLYW010000166.1 <> na Primary Assembly 278792 na SCAFFOLD_184 unplaced-scaffold na na CAVLYW010000167.1 <> na Primary Assembly 52000 na SCAFFOLD_135 unplaced-scaffold na na CAVLYW010000168.1 <> na Primary Assembly 86000 na scaffold_MT_1 assembled-molecule MT Mitochondrion OY776307.1 <> na non-nuclear 14984 na