# Assembly name: mPipNat.pri # Organism name: Pipistrellus nathusii (Nathusius's pipistrelle) # Taxid: 59473 # BioSample: SAMEA114653171 # BioProject: PRJEB70415 # Submitter: Leibniz Institute for Zoo and Wildlife Research # Date: 2024-02-07 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAVNZX01 # Assembly method: ccs-v6.0.0,cutadatapt-v2.3,TrimGalore-v0.6.7,hifiasm-v0.17.4,purge-dups-v1.2.6,yahs-v1.2a.1-patch,deepvariant-v1.2.0,bcftools-v1.11,bwa-mem2-v2.2.1,pairtools-v1.0.2,tabix-v1.11,pairix-v0.3.7,cooler-v0.9.3,higlass-v1.4,fcs-gx-v0.4.0.3,repeatmodeler-v2.0.4,repeatmasker-v4.1.5,toga-v1.1.4,hisat2-v2.2.1,stringtie-v2.2.1,transdecoder-v5.7.1,braker-v3.0.2,evidencemodeler-v2.1.0,diamond-v2.1.8,interproscan-v5.55-88.0,agat-v1.0.0 # Genome coverage: 42x # Sequencing technology: PacBio,Illumina # RefSeq category: Reference Genome # GenBank assembly accession: GCA_963693515.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_963693514.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chr_1 assembled-molecule 1 Chromosome OY882858.1 <> na Primary Assembly 209197390 na chr_2 assembled-molecule 2 Chromosome OY882859.1 <> na Primary Assembly 196764438 na chr_3 assembled-molecule 3 Chromosome OY882860.1 <> na Primary Assembly 190476234 na chr_4 assembled-molecule 4 Chromosome OY882861.1 <> na Primary Assembly 102345800 na chr_5 assembled-molecule 5 Chromosome OY882862.1 <> na Primary Assembly 97242187 na chr_6 assembled-molecule 6 Chromosome OY882863.1 <> na Primary Assembly 86915769 na chr_7 assembled-molecule 7 Chromosome OY882864.1 <> na Primary Assembly 86227429 na chr_8 assembled-molecule 8 Chromosome OY882865.1 <> na Primary Assembly 84086715 na chr_9 assembled-molecule 9 Chromosome OY882866.1 <> na Primary Assembly 75120082 na chr_10 assembled-molecule 10 Chromosome OY882867.1 <> na Primary Assembly 72181568 na chr_11 assembled-molecule 11 Chromosome OY882868.1 <> na Primary Assembly 71815049 na chr_12 assembled-molecule 12 Chromosome OY882869.1 <> na Primary Assembly 59953136 na chr_13 assembled-molecule 13 Chromosome OY882870.1 <> na Primary Assembly 54391558 na chr_14 assembled-molecule 14 Chromosome OY882871.1 <> na Primary Assembly 54173731 na chr_15 assembled-molecule 15 Chromosome OY882872.1 <> na Primary Assembly 50241875 na chr_16 assembled-molecule 16 Chromosome OY882873.1 <> na Primary Assembly 48644773 na chr_17 assembled-molecule 17 Chromosome OY882874.1 <> na Primary Assembly 48464210 na chr_18 assembled-molecule 18 Chromosome OY882875.1 <> na Primary Assembly 41064673 na chr_19 assembled-molecule 19 Chromosome OY882876.1 <> na Primary Assembly 25727265 na chr_20 assembled-molecule 20 Chromosome OY882877.1 <> na Primary Assembly 15334796 na chr_21 assembled-molecule 21 Chromosome OY882878.1 <> na Primary Assembly 11605936 na chr_X assembled-molecule X Chromosome OY882879.1 <> na Primary Assembly 106220528 na chr_Y assembled-molecule Y Chromosome OY882880.1 <> na Primary Assembly 5855128 na ms_1 unplaced-scaffold na na CAVNZX010000001.1 <> na Primary Assembly 3913 na ms_2 unplaced-scaffold na na CAVNZX010000002.1 <> na Primary Assembly 48095 na scaffold_100 unplaced-scaffold na na CAVNZX010000003.1 <> na Primary Assembly 58738 na scaffold_101 unplaced-scaffold na na CAVNZX010000004.1 <> na Primary Assembly 57727 na scaffold_102 unplaced-scaffold na na CAVNZX010000005.1 <> na Primary Assembly 56000 na scaffold_103 unplaced-scaffold na na CAVNZX010000006.1 <> na Primary Assembly 55446 na scaffold_104 unplaced-scaffold na na CAVNZX010000007.1 <> na Primary Assembly 53454 na scaffold_105 unplaced-scaffold na na CAVNZX010000008.1 <> na Primary Assembly 52916 na scaffold_106 unplaced-scaffold na na CAVNZX010000009.1 <> na Primary Assembly 50541 na scaffold_107 unplaced-scaffold na na CAVNZX010000010.1 <> na Primary Assembly 50000 na scaffold_108 unplaced-scaffold na na CAVNZX010000011.1 <> na Primary Assembly 48407 na scaffold_109 unplaced-scaffold na na CAVNZX010000012.1 <> na Primary Assembly 46165 na scaffold_110 unplaced-scaffold na na CAVNZX010000013.1 <> na Primary Assembly 46038 na scaffold_111 unplaced-scaffold na na CAVNZX010000014.1 <> na Primary Assembly 45000 na scaffold_112 unplaced-scaffold na na CAVNZX010000015.1 <> na Primary Assembly 44778 na scaffold_113 unplaced-scaffold na na CAVNZX010000016.1 <> na Primary Assembly 44339 na scaffold_114 unplaced-scaffold na na CAVNZX010000017.1 <> na Primary Assembly 43357 na scaffold_115 unplaced-scaffold na na CAVNZX010000018.1 <> na Primary Assembly 42973 na scaffold_116 unplaced-scaffold na na CAVNZX010000019.1 <> na Primary Assembly 41407 na scaffold_117 unplaced-scaffold na na CAVNZX010000020.1 <> na Primary Assembly 40979 na scaffold_118 unplaced-scaffold na na CAVNZX010000021.1 <> na Primary Assembly 40797 na scaffold_119 unplaced-scaffold na na CAVNZX010000022.1 <> na Primary Assembly 39712 na scaffold_11_1 unplaced-scaffold na na CAVNZX010000023.1 <> na Primary Assembly 54973 na scaffold_120 unplaced-scaffold na na CAVNZX010000024.1 <> na Primary Assembly 39174 na scaffold_121 unplaced-scaffold na na CAVNZX010000025.1 <> na Primary Assembly 39100 na scaffold_122 unplaced-scaffold na na CAVNZX010000026.1 <> na Primary Assembly 38843 na scaffold_123 unplaced-scaffold na na CAVNZX010000027.1 <> na Primary Assembly 36969 na scaffold_124 unplaced-scaffold na na CAVNZX010000028.1 <> na Primary Assembly 36343 na scaffold_125 unplaced-scaffold na na CAVNZX010000029.1 <> na Primary Assembly 33620 na scaffold_126 unplaced-scaffold na na CAVNZX010000030.1 <> na Primary Assembly 32255 na scaffold_127 unplaced-scaffold na na CAVNZX010000031.1 <> na Primary Assembly 31000 na scaffold_128 unplaced-scaffold na na CAVNZX010000032.1 <> na Primary Assembly 30652 na scaffold_129 unplaced-scaffold na na CAVNZX010000033.1 <> na Primary Assembly 29718 na scaffold_130 unplaced-scaffold na na CAVNZX010000034.1 <> na Primary Assembly 29338 na scaffold_131 unplaced-scaffold na na CAVNZX010000035.1 <> na Primary Assembly 28548 na scaffold_132 unplaced-scaffold na na CAVNZX010000036.1 <> na Primary Assembly 27110 na scaffold_133 unplaced-scaffold na na CAVNZX010000037.1 <> na Primary Assembly 26000 na scaffold_134 unplaced-scaffold na na CAVNZX010000038.1 <> na Primary Assembly 25216 na scaffold_135 unplaced-scaffold na na CAVNZX010000039.1 <> na Primary Assembly 23695 na scaffold_136 unplaced-scaffold na na CAVNZX010000040.1 <> na Primary Assembly 22000 na scaffold_137 unplaced-scaffold na na CAVNZX010000041.1 <> na Primary Assembly 21374 na scaffold_138 unplaced-scaffold na na CAVNZX010000042.1 <> na Primary Assembly 20851 na scaffold_139 unplaced-scaffold na na CAVNZX010000043.1 <> na Primary Assembly 19008 na scaffold_140 unplaced-scaffold na na CAVNZX010000044.1 <> na Primary Assembly 19000 na scaffold_141 unplaced-scaffold na na CAVNZX010000045.1 <> na Primary Assembly 18168 na scaffold_142 unplaced-scaffold na na CAVNZX010000046.1 <> na Primary Assembly 17951 na scaffold_143 unplaced-scaffold na na CAVNZX010000047.1 <> na Primary Assembly 12000 na scaffold_144 unplaced-scaffold na na CAVNZX010000048.1 <> na Primary Assembly 8000 na scaffold_145 unplaced-scaffold na na CAVNZX010000049.1 <> na Primary Assembly 4000 na scaffold_146 unplaced-scaffold na na CAVNZX010000050.1 <> na Primary Assembly 2000 na scaffold_147 unplaced-scaffold na na CAVNZX010000051.1 <> na Primary Assembly 1000 na scaffold_148 unplaced-scaffold na na CAVNZX010000052.1 <> na Primary Assembly 1000 na scaffold_22 unplaced-scaffold na na CAVNZX010000053.1 <> na Primary Assembly 530501 na scaffold_23 unplaced-scaffold na na CAVNZX010000054.1 <> na Primary Assembly 343303 na scaffold_24 unplaced-scaffold na na CAVNZX010000055.1 <> na Primary Assembly 307800 na scaffold_25 unplaced-scaffold na na CAVNZX010000056.1 <> na Primary Assembly 255000 na scaffold_26 unplaced-scaffold na na CAVNZX010000057.1 <> na Primary Assembly 220948 na scaffold_27 unplaced-scaffold na na CAVNZX010000058.1 <> na Primary Assembly 194171 na scaffold_28 unplaced-scaffold na na CAVNZX010000059.1 <> na Primary Assembly 193573 na scaffold_29 unplaced-scaffold na na CAVNZX010000060.1 <> na Primary Assembly 179701 na scaffold_30 unplaced-scaffold na na CAVNZX010000061.1 <> na Primary Assembly 164694 na scaffold_31 unplaced-scaffold na na CAVNZX010000062.1 <> na Primary Assembly 159709 na scaffold_32 unplaced-scaffold na na CAVNZX010000063.1 <> na Primary Assembly 159012 na scaffold_33 unplaced-scaffold na na CAVNZX010000064.1 <> na Primary Assembly 144638 na scaffold_34 unplaced-scaffold na na CAVNZX010000065.1 <> na Primary Assembly 138927 na scaffold_35 unplaced-scaffold na na CAVNZX010000066.1 <> na Primary Assembly 136642 na scaffold_36 unplaced-scaffold na na CAVNZX010000067.1 <> na Primary Assembly 135793 na scaffold_37 unplaced-scaffold na na CAVNZX010000068.1 <> na Primary Assembly 135034 na scaffold_38 unplaced-scaffold na na CAVNZX010000069.1 <> na Primary Assembly 132786 na scaffold_39 unplaced-scaffold na na CAVNZX010000070.1 <> na Primary Assembly 128351 na scaffold_40 unplaced-scaffold na na CAVNZX010000071.1 <> na Primary Assembly 121703 na scaffold_41 unplaced-scaffold na na CAVNZX010000072.1 <> na Primary Assembly 120893 na scaffold_42 unplaced-scaffold na na CAVNZX010000073.1 <> na Primary Assembly 117825 na scaffold_43 unplaced-scaffold na na CAVNZX010000074.1 <> na Primary Assembly 117065 na scaffold_44 unplaced-scaffold na na CAVNZX010000075.1 <> na Primary Assembly 108564 na scaffold_45 unplaced-scaffold na na CAVNZX010000076.1 <> na Primary Assembly 106258 na scaffold_46 unplaced-scaffold na na CAVNZX010000077.1 <> na Primary Assembly 106113 na scaffold_47 unplaced-scaffold na na CAVNZX010000078.1 <> na Primary Assembly 106087 na scaffold_48 unplaced-scaffold na na CAVNZX010000079.1 <> na Primary Assembly 102989 na scaffold_49 unplaced-scaffold na na CAVNZX010000080.1 <> na Primary Assembly 102476 na scaffold_50 unplaced-scaffold na na CAVNZX010000081.1 <> na Primary Assembly 99989 na scaffold_51 unplaced-scaffold na na CAVNZX010000082.1 <> na Primary Assembly 99597 na scaffold_52 unplaced-scaffold na na CAVNZX010000083.1 <> na Primary Assembly 98940 na scaffold_53 unplaced-scaffold na na CAVNZX010000084.1 <> na Primary Assembly 98730 na scaffold_54 unplaced-scaffold na na CAVNZX010000085.1 <> na Primary Assembly 98372 na scaffold_55 unplaced-scaffold na na CAVNZX010000086.1 <> na Primary Assembly 97779 na scaffold_56 unplaced-scaffold na na CAVNZX010000087.1 <> na Primary Assembly 96680 na scaffold_57 unplaced-scaffold na na CAVNZX010000088.1 <> na Primary Assembly 96000 na scaffold_58 unplaced-scaffold na na CAVNZX010000089.1 <> na Primary Assembly 94590 na scaffold_59 unplaced-scaffold na na CAVNZX010000090.1 <> na Primary Assembly 94000 na scaffold_60 unplaced-scaffold na na CAVNZX010000091.1 <> na Primary Assembly 91040 na scaffold_61 unplaced-scaffold na na CAVNZX010000092.1 <> na Primary Assembly 90479 na scaffold_62 unplaced-scaffold na na CAVNZX010000093.1 <> na Primary Assembly 90256 na scaffold_63 unplaced-scaffold na na CAVNZX010000094.1 <> na Primary Assembly 87751 na scaffold_64 unplaced-scaffold na na CAVNZX010000095.1 <> na Primary Assembly 85888 na scaffold_65 unplaced-scaffold na na CAVNZX010000096.1 <> na Primary Assembly 84910 na scaffold_66 unplaced-scaffold na na CAVNZX010000097.1 <> na Primary Assembly 83651 na scaffold_67 unplaced-scaffold na na CAVNZX010000098.1 <> na Primary Assembly 82355 na scaffold_68 unplaced-scaffold na na CAVNZX010000099.1 <> na Primary Assembly 80330 na scaffold_69 unplaced-scaffold na na CAVNZX010000100.1 <> na Primary Assembly 79982 na scaffold_70 unplaced-scaffold na na CAVNZX010000101.1 <> na Primary Assembly 78279 na scaffold_71 unplaced-scaffold na na CAVNZX010000102.1 <> na Primary Assembly 77523 na scaffold_72 unplaced-scaffold na na CAVNZX010000103.1 <> na Primary Assembly 77090 na scaffold_73 unplaced-scaffold na na CAVNZX010000104.1 <> na Primary Assembly 77000 na scaffold_74 unplaced-scaffold na na CAVNZX010000105.1 <> na Primary Assembly 75541 na scaffold_75 unplaced-scaffold na na CAVNZX010000106.1 <> na Primary Assembly 75180 na scaffold_76 unplaced-scaffold na na CAVNZX010000107.1 <> na Primary Assembly 75000 na scaffold_77 unplaced-scaffold na na CAVNZX010000108.1 <> na Primary Assembly 74732 na scaffold_78 unplaced-scaffold na na CAVNZX010000109.1 <> na Primary Assembly 74335 na scaffold_79 unplaced-scaffold na na CAVNZX010000110.1 <> na Primary Assembly 73789 na scaffold_80 unplaced-scaffold na na CAVNZX010000111.1 <> na Primary Assembly 73215 na scaffold_81 unplaced-scaffold na na CAVNZX010000112.1 <> na Primary Assembly 71955 na scaffold_82 unplaced-scaffold na na CAVNZX010000113.1 <> na Primary Assembly 71867 na scaffold_83 unplaced-scaffold na na CAVNZX010000114.1 <> na Primary Assembly 71024 na scaffold_84 unplaced-scaffold na na CAVNZX010000115.1 <> na Primary Assembly 70922 na scaffold_85 unplaced-scaffold na na CAVNZX010000116.1 <> na Primary Assembly 70763 na scaffold_86 unplaced-scaffold na na CAVNZX010000117.1 <> na Primary Assembly 69891 na scaffold_87 unplaced-scaffold na na CAVNZX010000118.1 <> na Primary Assembly 69197 na scaffold_88 unplaced-scaffold na na CAVNZX010000119.1 <> na Primary Assembly 67030 na scaffold_89 unplaced-scaffold na na CAVNZX010000120.1 <> na Primary Assembly 67014 na scaffold_90 unplaced-scaffold na na CAVNZX010000121.1 <> na Primary Assembly 66450 na scaffold_91 unplaced-scaffold na na CAVNZX010000122.1 <> na Primary Assembly 65946 na scaffold_92 unplaced-scaffold na na CAVNZX010000123.1 <> na Primary Assembly 64855 na scaffold_93 unplaced-scaffold na na CAVNZX010000124.1 <> na Primary Assembly 64144 na scaffold_94 unplaced-scaffold na na CAVNZX010000125.1 <> na Primary Assembly 63159 na scaffold_95 unplaced-scaffold na na CAVNZX010000126.1 <> na Primary Assembly 61602 na scaffold_96 unplaced-scaffold na na CAVNZX010000127.1 <> na Primary Assembly 61204 na scaffold_97 unplaced-scaffold na na CAVNZX010000128.1 <> na Primary Assembly 59745 na scaffold_98 unplaced-scaffold na na CAVNZX010000129.1 <> na Primary Assembly 59273 na scaffold_99 unplaced-scaffold na na CAVNZX010000130.1 <> na Primary Assembly 58780 na