# Assembly name: jaPorCyli1.1 # Organism name: Porites cylindrica (stony corals) # Taxid: 126659 # BioSample: SAMEA110640074 # BioProject: PRJEB75339 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2024-04-29 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAXIUU01 # Assembly method: various # Genome coverage: 30x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_964035525.1 # Linked assembly: GCA_964035495.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_964035524.1 Primary Assembly ## GCA_964035526.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OZ037775.1 <> na Primary Assembly 68678716 na SUPER_2 assembled-molecule 2 Chromosome OZ037776.1 <> na Primary Assembly 60484869 na SUPER_3 assembled-molecule 3 Chromosome OZ037777.1 <> na Primary Assembly 59204889 na SUPER_4 assembled-molecule 4 Chromosome OZ037778.1 <> na Primary Assembly 53196173 na SUPER_5 assembled-molecule 5 Chromosome OZ037779.1 <> na Primary Assembly 52762632 na SUPER_6 assembled-molecule 6 Chromosome OZ037780.1 <> na Primary Assembly 37871096 na SUPER_7 assembled-molecule 7 Chromosome OZ037781.1 <> na Primary Assembly 37838458 na SUPER_8 assembled-molecule 8 Chromosome OZ037782.1 <> na Primary Assembly 37813484 na SUPER_9 assembled-molecule 9 Chromosome OZ037783.1 <> na Primary Assembly 36268973 na SUPER_10 assembled-molecule 10 Chromosome OZ037784.1 <> na Primary Assembly 35863222 na SUPER_11 assembled-molecule 11 Chromosome OZ037785.1 <> na Primary Assembly 30915912 na SUPER_12 assembled-molecule 12 Chromosome OZ037786.1 <> na Primary Assembly 25484888 na SUPER_13 assembled-molecule 13 Chromosome OZ037787.1 <> na Primary Assembly 24229137 na SUPER_14 assembled-molecule 14 Chromosome OZ037788.1 <> na Primary Assembly 24041041 na SUPER_13_unloc_1 unlocalized-scaffold 13 Chromosome CAXIUU010000001.1 <> na Primary Assembly 179770 na scaffold_27 unplaced-scaffold na na CAXIUU010000002.1 <> na Primary Assembly 184065 na scaffold_70 unplaced-scaffold na na CAXIUU010000003.1 <> na Primary Assembly 41382 na scaffold_33 unplaced-scaffold na na CAXIUU010000004.1 <> na Primary Assembly 139000 na scaffold_37 unplaced-scaffold na na CAXIUU010000005.1 <> na Primary Assembly 116263 na scaffold_55 unplaced-scaffold na na CAXIUU010000006.1 <> na Primary Assembly 54285 na scaffold_99 unplaced-scaffold na na CAXIUU010000007.1 <> na Primary Assembly 25284 na scaffold_23 unplaced-scaffold na na CAXIUU010000008.1 <> na Primary Assembly 301116 na scaffold_136 unplaced-scaffold na na CAXIUU010000009.1 <> na Primary Assembly 6000 na scaffold_139 unplaced-scaffold na na CAXIUU010000010.1 <> na Primary Assembly 3000 na scaffold_115 unplaced-scaffold na na CAXIUU010000011.1 <> na Primary Assembly 20705 na scaffold_78 unplaced-scaffold na na CAXIUU010000012.1 <> na Primary Assembly 35874 na scaffold_89 unplaced-scaffold na na CAXIUU010000013.1 <> na Primary Assembly 30075 na scaffold_49 unplaced-scaffold na na CAXIUU010000014.1 <> na Primary Assembly 62321 na scaffold_128 unplaced-scaffold na na CAXIUU010000015.1 <> na Primary Assembly 15801 na scaffold_137 unplaced-scaffold na na CAXIUU010000016.1 <> na Primary Assembly 6000 na scaffold_141 unplaced-scaffold na na CAXIUU010000017.1 <> na Primary Assembly 2000 na scaffold_121 unplaced-scaffold na na CAXIUU010000018.1 <> na Primary Assembly 18203 na scaffold_72 unplaced-scaffold na na CAXIUU010000019.1 <> na Primary Assembly 39903 na scaffold_74 unplaced-scaffold na na CAXIUU010000020.1 <> na Primary Assembly 38035 na scaffold_108 unplaced-scaffold na na CAXIUU010000021.1 <> na Primary Assembly 22576 na scaffold_69 unplaced-scaffold na na CAXIUU010000022.1 <> na Primary Assembly 41863 na scaffold_39 unplaced-scaffold na na CAXIUU010000023.1 <> na Primary Assembly 102425 na scaffold_105 unplaced-scaffold na na CAXIUU010000024.1 <> na Primary Assembly 23459 na scaffold_97 unplaced-scaffold na na CAXIUU010000025.1 <> na Primary Assembly 26384 na scaffold_133 unplaced-scaffold na na CAXIUU010000026.1 <> na Primary Assembly 13832 na scaffold_75 unplaced-scaffold na na CAXIUU010000027.1 <> na Primary Assembly 37412 na scaffold_93 unplaced-scaffold na na CAXIUU010000028.1 <> na Primary Assembly 28221 na scaffold_47 unplaced-scaffold na na CAXIUU010000029.1 <> na Primary Assembly 64139 na scaffold_87 unplaced-scaffold na na CAXIUU010000030.1 <> na Primary Assembly 30410 na scaffold_76 unplaced-scaffold na na CAXIUU010000031.1 <> na Primary Assembly 37182 na scaffold_71 unplaced-scaffold na na CAXIUU010000032.1 <> na Primary Assembly 41330 na scaffold_111 unplaced-scaffold na na CAXIUU010000033.1 <> na Primary Assembly 21669 na scaffold_83 unplaced-scaffold na na CAXIUU010000034.1 <> na Primary Assembly 32682 na scaffold_43 unplaced-scaffold na na CAXIUU010000035.1 <> na Primary Assembly 84000 na scaffold_118 unplaced-scaffold na na CAXIUU010000036.1 <> na Primary Assembly 19620 na scaffold_130 unplaced-scaffold na na CAXIUU010000037.1 <> na Primary Assembly 15509 na scaffold_132 unplaced-scaffold na na CAXIUU010000038.1 <> na Primary Assembly 13863 na scaffold_52 unplaced-scaffold na na CAXIUU010000039.1 <> na Primary Assembly 59372 na scaffold_125 unplaced-scaffold na na CAXIUU010000040.1 <> na Primary Assembly 17319 na scaffold_63 unplaced-scaffold na na CAXIUU010000041.1 <> na Primary Assembly 48112 na scaffold_67 unplaced-scaffold na na CAXIUU010000042.1 <> na Primary Assembly 45198 na scaffold_95 unplaced-scaffold na na CAXIUU010000043.1 <> na Primary Assembly 27810 na scaffold_59 unplaced-scaffold na na CAXIUU010000044.1 <> na Primary Assembly 52100 na scaffold_41 unplaced-scaffold na na CAXIUU010000045.1 <> na Primary Assembly 84304 na scaffold_127 unplaced-scaffold na na CAXIUU010000046.1 <> na Primary Assembly 15904 na scaffold_81 unplaced-scaffold na na CAXIUU010000047.1 <> na Primary Assembly 34362 na scaffold_77 unplaced-scaffold na na CAXIUU010000048.1 <> na Primary Assembly 37000 na scaffold_131 unplaced-scaffold na na CAXIUU010000049.1 <> na Primary Assembly 15407 na scaffold_46 unplaced-scaffold na na CAXIUU010000050.1 <> na Primary Assembly 81000 na scaffold_114 unplaced-scaffold na na CAXIUU010000051.1 <> na Primary Assembly 21036 na scaffold_86 unplaced-scaffold na na CAXIUU010000052.1 <> na Primary Assembly 31002 na scaffold_45 unplaced-scaffold na na CAXIUU010000053.1 <> na Primary Assembly 81917 na scaffold_85 unplaced-scaffold na na CAXIUU010000054.1 <> na Primary Assembly 31327 na scaffold_96 unplaced-scaffold na na CAXIUU010000055.1 <> na Primary Assembly 27266 na scaffold_91 unplaced-scaffold na na CAXIUU010000056.1 <> na Primary Assembly 29173 na scaffold_113 unplaced-scaffold na na CAXIUU010000057.1 <> na Primary Assembly 21329 na scaffold_66 unplaced-scaffold na na CAXIUU010000058.1 <> na Primary Assembly 47069 na scaffold_107 unplaced-scaffold na na CAXIUU010000059.1 <> na Primary Assembly 22641 na scaffold_34 unplaced-scaffold na na CAXIUU010000060.1 <> na Primary Assembly 135926 na scaffold_112 unplaced-scaffold na na CAXIUU010000061.1 <> na Primary Assembly 21403 na scaffold_110 unplaced-scaffold na na CAXIUU010000062.1 <> na Primary Assembly 22075 na scaffold_138 unplaced-scaffold na na CAXIUU010000063.1 <> na Primary Assembly 4000 na scaffold_126 unplaced-scaffold na na CAXIUU010000064.1 <> na Primary Assembly 16677 na scaffold_65 unplaced-scaffold na na CAXIUU010000065.1 <> na Primary Assembly 47694 na scaffold_53 unplaced-scaffold na na CAXIUU010000066.1 <> na Primary Assembly 55919 na scaffold_119 unplaced-scaffold na na CAXIUU010000067.1 <> na Primary Assembly 18781 na scaffold_48 unplaced-scaffold na na CAXIUU010000068.1 <> na Primary Assembly 64000 na scaffold_122 unplaced-scaffold na na CAXIUU010000069.1 <> na Primary Assembly 18047 na scaffold_142 unplaced-scaffold na na CAXIUU010000070.1 <> na Primary Assembly 2000 na scaffold_90 unplaced-scaffold na na CAXIUU010000071.1 <> na Primary Assembly 29762 na scaffold_140 unplaced-scaffold na na CAXIUU010000072.1 <> na Primary Assembly 3000 na scaffold_103 unplaced-scaffold na na CAXIUU010000073.1 <> na Primary Assembly 24459 na scaffold_31 unplaced-scaffold na na CAXIUU010000074.1 <> na Primary Assembly 171548 na scaffold_36 unplaced-scaffold na na CAXIUU010000075.1 <> na Primary Assembly 123097 na scaffold_21 unplaced-scaffold na na CAXIUU010000076.1 <> na Primary Assembly 370896 na scaffold_40 unplaced-scaffold na na CAXIUU010000077.1 <> na Primary Assembly 90718 na scaffold_80 unplaced-scaffold na na CAXIUU010000078.1 <> na Primary Assembly 34432 na scaffold_62 unplaced-scaffold na na CAXIUU010000079.1 <> na Primary Assembly 51000 na scaffold_104 unplaced-scaffold na na CAXIUU010000080.1 <> na Primary Assembly 23526 na scaffold_64 unplaced-scaffold na na CAXIUU010000081.1 <> na Primary Assembly 48074 na scaffold_94 unplaced-scaffold na na CAXIUU010000082.1 <> na Primary Assembly 27914 na scaffold_92 unplaced-scaffold na na CAXIUU010000083.1 <> na Primary Assembly 28929 na scaffold_123 unplaced-scaffold na na CAXIUU010000084.1 <> na Primary Assembly 17941 na scaffold_100 unplaced-scaffold na na CAXIUU010000085.1 <> na Primary Assembly 25184 na scaffold_143 unplaced-scaffold na na CAXIUU010000086.1 <> na Primary Assembly 2000 na scaffold_68 unplaced-scaffold na na CAXIUU010000087.1 <> na Primary Assembly 42880 na scaffold_60 unplaced-scaffold na na CAXIUU010000088.1 <> na Primary Assembly 51878 na scaffold_144 unplaced-scaffold na na CAXIUU010000089.1 <> na Primary Assembly 2000 na scaffold_124 unplaced-scaffold na na CAXIUU010000090.1 <> na Primary Assembly 17450 na scaffold_117 unplaced-scaffold na na CAXIUU010000091.1 <> na Primary Assembly 20538 na scaffold_42 unplaced-scaffold na na CAXIUU010000092.1 <> na Primary Assembly 84106 na scaffold_44 unplaced-scaffold na na CAXIUU010000093.1 <> na Primary Assembly 83519 na scaffold_82 unplaced-scaffold na na CAXIUU010000094.1 <> na Primary Assembly 33000 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ037789.1 <> na non-nuclear 18647 na