# Assembly name: fSynRos1.1 # Organism name: Syngnathus rostellatus (Nilsson's pipefish) # Taxid: 161589 # BioSample: SAMEA118206861 # BioProject: PRJEB89003 # Submitter: Genoscope # Date: 2025-07-19 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CBFFOI01 # Assembly method: Hifiasm,Purge_dups,Yahs # Genome coverage: 47x # Sequencing technology: PacBio,Arima # RefSeq category: Reference Genome # GenBank assembly accession: GCA_965643225.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_965643224.1 Primary Assembly ## GCA_965643226.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OZ285766.1 <> na Primary Assembly 28414451 na SUPER_2 assembled-molecule 2 Chromosome OZ285767.1 <> na Primary Assembly 27261349 na SUPER_3 assembled-molecule 3 Chromosome OZ285768.1 <> na Primary Assembly 22491743 na SUPER_4 assembled-molecule 4 Chromosome OZ285769.1 <> na Primary Assembly 21987758 na SUPER_5 assembled-molecule 5 Chromosome OZ285770.1 <> na Primary Assembly 20189011 na SUPER_6 assembled-molecule 6 Chromosome OZ285771.1 <> na Primary Assembly 18906084 na SUPER_7 assembled-molecule 7 Chromosome OZ285772.1 <> na Primary Assembly 18819050 na SUPER_8 assembled-molecule 8 Chromosome OZ285773.1 <> na Primary Assembly 16008141 na SUPER_9 assembled-molecule 9 Chromosome OZ285774.1 <> na Primary Assembly 15703910 na SUPER_10 assembled-molecule 10 Chromosome OZ285775.1 <> na Primary Assembly 15565731 na SUPER_11 assembled-molecule 11 Chromosome OZ285776.1 <> na Primary Assembly 15200438 na SUPER_12 assembled-molecule 12 Chromosome OZ285777.1 <> na Primary Assembly 15179893 na SUPER_13 assembled-molecule 13 Chromosome OZ285778.1 <> na Primary Assembly 14490092 na SUPER_14 assembled-molecule 14 Chromosome OZ285779.1 <> na Primary Assembly 14287997 na SUPER_15 assembled-molecule 15 Chromosome OZ285780.1 <> na Primary Assembly 13025798 na SUPER_16 assembled-molecule 16 Chromosome OZ285781.1 <> na Primary Assembly 12165588 na SUPER_17 assembled-molecule 17 Chromosome OZ285782.1 <> na Primary Assembly 11970275 na SUPER_18 assembled-molecule 18 Chromosome OZ285783.1 <> na Primary Assembly 10928580 na SUPER_19 assembled-molecule 19 Chromosome OZ285784.1 <> na Primary Assembly 10521787 na SUPER_20 assembled-molecule 20 Chromosome OZ285785.1 <> na Primary Assembly 9738000 na SUPER_21 assembled-molecule 21 Chromosome OZ285786.1 <> na Primary Assembly 9266758 na SUPER_22 assembled-molecule 22 Chromosome OZ285787.1 <> na Primary Assembly 8069885 na SUPER_12_unloc_1 unlocalized-scaffold 12 Chromosome CBFFOI010000001.1 <> na Primary Assembly 82075 na scaffold_24 unplaced-scaffold na na CBFFOI010000002.1 <> na Primary Assembly 3016000 na scaffold_26 unplaced-scaffold na na CBFFOI010000003.1 <> na Primary Assembly 2027000 na scaffold_30 unplaced-scaffold na na CBFFOI010000004.1 <> na Primary Assembly 1655000 na scaffold_31 unplaced-scaffold na na CBFFOI010000005.1 <> na Primary Assembly 1599279 na scaffold_32 unplaced-scaffold na na CBFFOI010000006.1 <> na Primary Assembly 1567259 na scaffold_33 unplaced-scaffold na na CBFFOI010000007.1 <> na Primary Assembly 1506376 na scaffold_34 unplaced-scaffold na na CBFFOI010000008.1 <> na Primary Assembly 1307453 na scaffold_35 unplaced-scaffold na na CBFFOI010000009.1 <> na Primary Assembly 1212740 na scaffold_37 unplaced-scaffold na na CBFFOI010000010.1 <> na Primary Assembly 1080000 na scaffold_38 unplaced-scaffold na na CBFFOI010000011.1 <> na Primary Assembly 1005000 na scaffold_39 unplaced-scaffold na na CBFFOI010000012.1 <> na Primary Assembly 976000 na scaffold_40 unplaced-scaffold na na CBFFOI010000013.1 <> na Primary Assembly 853000 na scaffold_42 unplaced-scaffold na na CBFFOI010000014.1 <> na Primary Assembly 813000 na scaffold_43 unplaced-scaffold na na CBFFOI010000015.1 <> na Primary Assembly 706000 na scaffold_44 unplaced-scaffold na na CBFFOI010000016.1 <> na Primary Assembly 703000 na scaffold_45 unplaced-scaffold na na CBFFOI010000017.1 <> na Primary Assembly 652000 na scaffold_46 unplaced-scaffold na na CBFFOI010000018.1 <> na Primary Assembly 615317 na scaffold_47 unplaced-scaffold na na CBFFOI010000019.1 <> na Primary Assembly 591000 na scaffold_48 unplaced-scaffold na na CBFFOI010000020.1 <> na Primary Assembly 523000 na scaffold_49 unplaced-scaffold na na CBFFOI010000021.1 <> na Primary Assembly 490000 na scaffold_50 unplaced-scaffold na na CBFFOI010000022.1 <> na Primary Assembly 462000 na scaffold_51 unplaced-scaffold na na CBFFOI010000023.1 <> na Primary Assembly 431000 na scaffold_52 unplaced-scaffold na na CBFFOI010000024.1 <> na Primary Assembly 394000 na scaffold_53 unplaced-scaffold na na CBFFOI010000025.1 <> na Primary Assembly 393166 na scaffold_54 unplaced-scaffold na na CBFFOI010000026.1 <> na Primary Assembly 388587 na scaffold_55 unplaced-scaffold na na CBFFOI010000027.1 <> na Primary Assembly 366391 na scaffold_56 unplaced-scaffold na na CBFFOI010000028.1 <> na Primary Assembly 351000 na scaffold_57 unplaced-scaffold na na CBFFOI010000029.1 <> na Primary Assembly 266000 na scaffold_60 unplaced-scaffold na na CBFFOI010000030.1 <> na Primary Assembly 210000 na scaffold_61 unplaced-scaffold na na CBFFOI010000031.1 <> na Primary Assembly 199035 na scaffold_62 unplaced-scaffold na na CBFFOI010000032.1 <> na Primary Assembly 191868 na scaffold_63 unplaced-scaffold na na CBFFOI010000033.1 <> na Primary Assembly 186000 na scaffold_64 unplaced-scaffold na na CBFFOI010000034.1 <> na Primary Assembly 166000 na scaffold_65 unplaced-scaffold na na CBFFOI010000035.1 <> na Primary Assembly 162000 na scaffold_66 unplaced-scaffold na na CBFFOI010000036.1 <> na Primary Assembly 161000 na scaffold_68 unplaced-scaffold na na CBFFOI010000037.1 <> na Primary Assembly 127000 na scaffold_69 unplaced-scaffold na na CBFFOI010000038.1 <> na Primary Assembly 121000 na scaffold_70 unplaced-scaffold na na CBFFOI010000039.1 <> na Primary Assembly 110889 na scaffold_71 unplaced-scaffold na na CBFFOI010000040.1 <> na Primary Assembly 105000 na scaffold_72 unplaced-scaffold na na CBFFOI010000041.1 <> na Primary Assembly 99000 na scaffold_73 unplaced-scaffold na na CBFFOI010000042.1 <> na Primary Assembly 94000 na scaffold_74 unplaced-scaffold na na CBFFOI010000043.1 <> na Primary Assembly 75299 na scaffold_75 unplaced-scaffold na na CBFFOI010000044.1 <> na Primary Assembly 71000 na scaffold_76 unplaced-scaffold na na CBFFOI010000045.1 <> na Primary Assembly 71000 na scaffold_77 unplaced-scaffold na na CBFFOI010000046.1 <> na Primary Assembly 62000 na scaffold_78 unplaced-scaffold na na CBFFOI010000047.1 <> na Primary Assembly 61299 na scaffold_79 unplaced-scaffold na na CBFFOI010000048.1 <> na Primary Assembly 61000 na scaffold_80 unplaced-scaffold na na CBFFOI010000049.1 <> na Primary Assembly 54000 na scaffold_81 unplaced-scaffold na na CBFFOI010000050.1 <> na Primary Assembly 52596 na scaffold_82 unplaced-scaffold na na CBFFOI010000051.1 <> na Primary Assembly 51550 na scaffold_84 unplaced-scaffold na na CBFFOI010000052.1 <> na Primary Assembly 38000 na scaffold_85 unplaced-scaffold na na CBFFOI010000053.1 <> na Primary Assembly 32404 na scaffold_87 unplaced-scaffold na na CBFFOI010000054.1 <> na Primary Assembly 25000 na mitochondrion_1 assembled-molecule MIT Mitochondrion OZ285788.1 <> na non-nuclear 16508 na