# Assembly name: cbOliHerc1.1 # Organism name: Oligotrichum hercynicum (mosses) # Taxid: 201549 # BioSample: SAMEA112689703 # BioProject: PRJEB101218 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2025-11-07 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CDRNFM01 # Assembly method: various # Genome coverage: 217x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_977013005.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_977013004.1 Primary Assembly ## GCA_977013006.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OZ349642.1 <> na Primary Assembly 77832907 na SUPER_2 assembled-molecule 2 Chromosome OZ349643.1 <> na Primary Assembly 72454988 na SUPER_3 assembled-molecule 3 Chromosome OZ349644.1 <> na Primary Assembly 64585166 na SUPER_4 assembled-molecule 4 Chromosome OZ349645.1 <> na Primary Assembly 56558350 na SUPER_5 assembled-molecule 5 Chromosome OZ349646.1 <> na Primary Assembly 50622351 na SUPER_6 assembled-molecule 6 Chromosome OZ349647.1 <> na Primary Assembly 41594128 na SUPER_7 assembled-molecule 7 Chromosome OZ349648.1 <> na Primary Assembly 41164576 na SUPER_3_unloc_1 unlocalized-scaffold 3 Chromosome CDRNFM010000001.1 <> na Primary Assembly 87947 na SUPER_3_unloc_2 unlocalized-scaffold 3 Chromosome CDRNFM010000002.1 <> na Primary Assembly 24181 na SCAFFOLD_3 unplaced-scaffold na na CDRNFM010000003.1 <> na Primary Assembly 83246 na SCAFFOLD_4 unplaced-scaffold na na CDRNFM010000004.1 <> na Primary Assembly 61426 na SCAFFOLD_5 unplaced-scaffold na na CDRNFM010000005.1 <> na Primary Assembly 48622 na SCAFFOLD_6 unplaced-scaffold na na CDRNFM010000006.1 <> na Primary Assembly 117741 na SCAFFOLD_7 unplaced-scaffold na na CDRNFM010000007.1 <> na Primary Assembly 140736 na SCAFFOLD_28 unplaced-scaffold na na CDRNFM010000008.1 <> na Primary Assembly 54147 na SCAFFOLD_31 unplaced-scaffold na na CDRNFM010000009.1 <> na Primary Assembly 51841 na SCAFFOLD_35 unplaced-scaffold na na CDRNFM010000010.1 <> na Primary Assembly 48907 na SCAFFOLD_41 unplaced-scaffold na na CDRNFM010000011.1 <> na Primary Assembly 45659 na SCAFFOLD_43 unplaced-scaffold na na CDRNFM010000012.1 <> na Primary Assembly 44875 na SCAFFOLD_45 unplaced-scaffold na na CDRNFM010000013.1 <> na Primary Assembly 44115 na SCAFFOLD_47 unplaced-scaffold na na CDRNFM010000014.1 <> na Primary Assembly 43070 na SCAFFOLD_49 unplaced-scaffold na na CDRNFM010000015.1 <> na Primary Assembly 42859 na SCAFFOLD_59 unplaced-scaffold na na CDRNFM010000016.1 <> na Primary Assembly 39948 na SCAFFOLD_66 unplaced-scaffold na na CDRNFM010000017.1 <> na Primary Assembly 38542 na SCAFFOLD_70 unplaced-scaffold na na CDRNFM010000018.1 <> na Primary Assembly 38132 na SCAFFOLD_78 unplaced-scaffold na na CDRNFM010000019.1 <> na Primary Assembly 36622 na SCAFFOLD_82 unplaced-scaffold na na CDRNFM010000020.1 <> na Primary Assembly 35920 na SCAFFOLD_87 unplaced-scaffold na na CDRNFM010000021.1 <> na Primary Assembly 35503 na SCAFFOLD_90 unplaced-scaffold na na CDRNFM010000022.1 <> na Primary Assembly 34531 na SCAFFOLD_97 unplaced-scaffold na na CDRNFM010000023.1 <> na Primary Assembly 33747 na SCAFFOLD_100 unplaced-scaffold na na CDRNFM010000024.1 <> na Primary Assembly 33417 na SCAFFOLD_109 unplaced-scaffold na na CDRNFM010000025.1 <> na Primary Assembly 32719 na SCAFFOLD_114 unplaced-scaffold na na CDRNFM010000026.1 <> na Primary Assembly 32594 na SCAFFOLD_115 unplaced-scaffold na na CDRNFM010000027.1 <> na Primary Assembly 32587 na SCAFFOLD_119 unplaced-scaffold na na CDRNFM010000028.1 <> na Primary Assembly 32307 na SCAFFOLD_130 unplaced-scaffold na na CDRNFM010000029.1 <> na Primary Assembly 31433 na SCAFFOLD_134 unplaced-scaffold na na CDRNFM010000030.1 <> na Primary Assembly 31284 na SCAFFOLD_141 unplaced-scaffold na na CDRNFM010000031.1 <> na Primary Assembly 30880 na SCAFFOLD_142 unplaced-scaffold na na CDRNFM010000032.1 <> na Primary Assembly 30770 na SCAFFOLD_144 unplaced-scaffold na na CDRNFM010000033.1 <> na Primary Assembly 30723 na SCAFFOLD_154 unplaced-scaffold na na CDRNFM010000034.1 <> na Primary Assembly 30399 na SCAFFOLD_156 unplaced-scaffold na na CDRNFM010000035.1 <> na Primary Assembly 30348 na SCAFFOLD_162 unplaced-scaffold na na CDRNFM010000036.1 <> na Primary Assembly 30128 na SCAFFOLD_165 unplaced-scaffold na na CDRNFM010000037.1 <> na Primary Assembly 30111 na SCAFFOLD_169 unplaced-scaffold na na CDRNFM010000038.1 <> na Primary Assembly 30041 na SCAFFOLD_173 unplaced-scaffold na na CDRNFM010000039.1 <> na Primary Assembly 29677 na SCAFFOLD_176 unplaced-scaffold na na CDRNFM010000040.1 <> na Primary Assembly 29537 na SCAFFOLD_186 unplaced-scaffold na na CDRNFM010000041.1 <> na Primary Assembly 29282 na SCAFFOLD_194 unplaced-scaffold na na CDRNFM010000042.1 <> na Primary Assembly 28996 na SCAFFOLD_218 unplaced-scaffold na na CDRNFM010000043.1 <> na Primary Assembly 28256 na SCAFFOLD_220 unplaced-scaffold na na CDRNFM010000044.1 <> na Primary Assembly 28210 na SCAFFOLD_221 unplaced-scaffold na na CDRNFM010000045.1 <> na Primary Assembly 28200 na SCAFFOLD_226 unplaced-scaffold na na CDRNFM010000046.1 <> na Primary Assembly 27963 na SCAFFOLD_233 unplaced-scaffold na na CDRNFM010000047.1 <> na Primary Assembly 27901 na SCAFFOLD_234 unplaced-scaffold na na CDRNFM010000048.1 <> na Primary Assembly 27851 na SCAFFOLD_239 unplaced-scaffold na na CDRNFM010000049.1 <> na Primary Assembly 27769 na SCAFFOLD_241 unplaced-scaffold na na CDRNFM010000050.1 <> na Primary Assembly 27747 na SCAFFOLD_252 unplaced-scaffold na na CDRNFM010000051.1 <> na Primary Assembly 27439 na SCAFFOLD_260 unplaced-scaffold na na CDRNFM010000052.1 <> na Primary Assembly 27275 na SCAFFOLD_263 unplaced-scaffold na na CDRNFM010000053.1 <> na Primary Assembly 27115 na SCAFFOLD_266 unplaced-scaffold na na CDRNFM010000054.1 <> na Primary Assembly 26986 na SCAFFOLD_282 unplaced-scaffold na na CDRNFM010000055.1 <> na Primary Assembly 26549 na SCAFFOLD_284 unplaced-scaffold na na CDRNFM010000056.1 <> na Primary Assembly 26536 na SCAFFOLD_296 unplaced-scaffold na na CDRNFM010000057.1 <> na Primary Assembly 26342 na SCAFFOLD_314 unplaced-scaffold na na CDRNFM010000058.1 <> na Primary Assembly 26031 na SCAFFOLD_319 unplaced-scaffold na na CDRNFM010000059.1 <> na Primary Assembly 25970 na SCAFFOLD_320 unplaced-scaffold na na CDRNFM010000060.1 <> na Primary Assembly 25957 na SCAFFOLD_343 unplaced-scaffold na na CDRNFM010000061.1 <> na Primary Assembly 25582 na SCAFFOLD_354 unplaced-scaffold na na CDRNFM010000062.1 <> na Primary Assembly 25461 na SCAFFOLD_359 unplaced-scaffold na na CDRNFM010000063.1 <> na Primary Assembly 25436 na SCAFFOLD_362 unplaced-scaffold na na CDRNFM010000064.1 <> na Primary Assembly 25364 na SCAFFOLD_366 unplaced-scaffold na na CDRNFM010000065.1 <> na Primary Assembly 25320 na SCAFFOLD_383 unplaced-scaffold na na CDRNFM010000066.1 <> na Primary Assembly 24988 na SCAFFOLD_401 unplaced-scaffold na na CDRNFM010000067.1 <> na Primary Assembly 24766 na SCAFFOLD_407 unplaced-scaffold na na CDRNFM010000068.1 <> na Primary Assembly 24700 na SCAFFOLD_418 unplaced-scaffold na na CDRNFM010000069.1 <> na Primary Assembly 24552 na SCAFFOLD_422 unplaced-scaffold na na CDRNFM010000070.1 <> na Primary Assembly 24500 na SCAFFOLD_424 unplaced-scaffold na na CDRNFM010000071.1 <> na Primary Assembly 24489 na SCAFFOLD_430 unplaced-scaffold na na CDRNFM010000072.1 <> na Primary Assembly 24380 na SCAFFOLD_438 unplaced-scaffold na na CDRNFM010000073.1 <> na Primary Assembly 24278 na SCAFFOLD_454 unplaced-scaffold na na CDRNFM010000074.1 <> na Primary Assembly 24064 na SCAFFOLD_456 unplaced-scaffold na na CDRNFM010000075.1 <> na Primary Assembly 24054 na SCAFFOLD_459 unplaced-scaffold na na CDRNFM010000076.1 <> na Primary Assembly 24011 na SCAFFOLD_461 unplaced-scaffold na na CDRNFM010000077.1 <> na Primary Assembly 23964 na SCAFFOLD_465 unplaced-scaffold na na CDRNFM010000078.1 <> na Primary Assembly 23929 na SCAFFOLD_480 unplaced-scaffold na na CDRNFM010000079.1 <> na Primary Assembly 23706 na SCAFFOLD_486 unplaced-scaffold na na CDRNFM010000080.1 <> na Primary Assembly 23656 na SCAFFOLD_490 unplaced-scaffold na na CDRNFM010000081.1 <> na Primary Assembly 23622 na SCAFFOLD_502 unplaced-scaffold na na CDRNFM010000082.1 <> na Primary Assembly 23466 na SCAFFOLD_503 unplaced-scaffold na na CDRNFM010000083.1 <> na Primary Assembly 23462 na SCAFFOLD_509 unplaced-scaffold na na CDRNFM010000084.1 <> na Primary Assembly 23366 na SCAFFOLD_518 unplaced-scaffold na na CDRNFM010000085.1 <> na Primary Assembly 23231 na SCAFFOLD_532 unplaced-scaffold na na CDRNFM010000086.1 <> na Primary Assembly 23082 na SCAFFOLD_539 unplaced-scaffold na na CDRNFM010000087.1 <> na Primary Assembly 23018 na SCAFFOLD_543 unplaced-scaffold na na CDRNFM010000088.1 <> na Primary Assembly 22937 na SCAFFOLD_544 unplaced-scaffold na na CDRNFM010000089.1 <> na Primary Assembly 22915 na SCAFFOLD_553 unplaced-scaffold na na CDRNFM010000090.1 <> na Primary Assembly 22807 na SCAFFOLD_559 unplaced-scaffold na na CDRNFM010000091.1 <> na Primary Assembly 22695 na SCAFFOLD_562 unplaced-scaffold na na CDRNFM010000092.1 <> na Primary Assembly 22650 na SCAFFOLD_572 unplaced-scaffold na na CDRNFM010000093.1 <> na Primary Assembly 22550 na SCAFFOLD_588 unplaced-scaffold na na CDRNFM010000094.1 <> na Primary Assembly 22446 na SCAFFOLD_591 unplaced-scaffold na na CDRNFM010000095.1 <> na Primary Assembly 22382 na SCAFFOLD_594 unplaced-scaffold na na CDRNFM010000096.1 <> na Primary Assembly 22363 na SCAFFOLD_611 unplaced-scaffold na na CDRNFM010000097.1 <> na Primary Assembly 22194 na SCAFFOLD_615 unplaced-scaffold na na CDRNFM010000098.1 <> na Primary Assembly 22162 na SCAFFOLD_619 unplaced-scaffold na na CDRNFM010000099.1 <> na Primary Assembly 22068 na SCAFFOLD_621 unplaced-scaffold na na CDRNFM010000100.1 <> na Primary Assembly 22053 na SCAFFOLD_622 unplaced-scaffold na na CDRNFM010000101.1 <> na Primary Assembly 22037 na SCAFFOLD_635 unplaced-scaffold na na CDRNFM010000102.1 <> na Primary Assembly 21936 na SCAFFOLD_646 unplaced-scaffold na na CDRNFM010000103.1 <> na Primary Assembly 21830 na SCAFFOLD_651 unplaced-scaffold na na CDRNFM010000104.1 <> na Primary Assembly 21804 na SCAFFOLD_676 unplaced-scaffold na na CDRNFM010000105.1 <> na Primary Assembly 21545 na SCAFFOLD_689 unplaced-scaffold na na CDRNFM010000106.1 <> na Primary Assembly 21500 na SCAFFOLD_693 unplaced-scaffold na na CDRNFM010000107.1 <> na Primary Assembly 21436 na SCAFFOLD_701 unplaced-scaffold na na CDRNFM010000108.1 <> na Primary Assembly 21361 na SCAFFOLD_711 unplaced-scaffold na na CDRNFM010000109.1 <> na Primary Assembly 21289 na SCAFFOLD_730 unplaced-scaffold na na CDRNFM010000110.1 <> na Primary Assembly 21122 na SCAFFOLD_738 unplaced-scaffold na na CDRNFM010000111.1 <> na Primary Assembly 21065 na SCAFFOLD_765 unplaced-scaffold na na CDRNFM010000112.1 <> na Primary Assembly 20887 na SCAFFOLD_768 unplaced-scaffold na na CDRNFM010000113.1 <> na Primary Assembly 20852 na SCAFFOLD_786 unplaced-scaffold na na CDRNFM010000114.1 <> na Primary Assembly 20655 na SCAFFOLD_789 unplaced-scaffold na na CDRNFM010000115.1 <> na Primary Assembly 20638 na SCAFFOLD_799 unplaced-scaffold na na CDRNFM010000116.1 <> na Primary Assembly 20538 na SCAFFOLD_805 unplaced-scaffold na na CDRNFM010000117.1 <> na Primary Assembly 20506 na SCAFFOLD_820 unplaced-scaffold na na CDRNFM010000118.1 <> na Primary Assembly 20333 na SCAFFOLD_828 unplaced-scaffold na na CDRNFM010000119.1 <> na Primary Assembly 20262 na SCAFFOLD_830 unplaced-scaffold na na CDRNFM010000120.1 <> na Primary Assembly 20251 na SCAFFOLD_873 unplaced-scaffold na na CDRNFM010000121.1 <> na Primary Assembly 19850 na SCAFFOLD_881 unplaced-scaffold na na CDRNFM010000122.1 <> na Primary Assembly 19776 na SCAFFOLD_883 unplaced-scaffold na na CDRNFM010000123.1 <> na Primary Assembly 19767 na SCAFFOLD_893 unplaced-scaffold na na CDRNFM010000124.1 <> na Primary Assembly 19612 na SCAFFOLD_930 unplaced-scaffold na na CDRNFM010000125.1 <> na Primary Assembly 19273 na SCAFFOLD_981 unplaced-scaffold na na CDRNFM010000126.1 <> na Primary Assembly 18831 na SCAFFOLD_994 unplaced-scaffold na na CDRNFM010000127.1 <> na Primary Assembly 18677 na SCAFFOLD_1005 unplaced-scaffold na na CDRNFM010000128.1 <> na Primary Assembly 18575 na SCAFFOLD_1014 unplaced-scaffold na na CDRNFM010000129.1 <> na Primary Assembly 18503 na SCAFFOLD_1036 unplaced-scaffold na na CDRNFM010000130.1 <> na Primary Assembly 18320 na SCAFFOLD_1058 unplaced-scaffold na na CDRNFM010000131.1 <> na Primary Assembly 18045 na SCAFFOLD_1080 unplaced-scaffold na na CDRNFM010000132.1 <> na Primary Assembly 17824 na SCAFFOLD_1082 unplaced-scaffold na na CDRNFM010000133.1 <> na Primary Assembly 17796 na SCAFFOLD_1111 unplaced-scaffold na na CDRNFM010000134.1 <> na Primary Assembly 17508 na SCAFFOLD_1114 unplaced-scaffold na na CDRNFM010000135.1 <> na Primary Assembly 17467 na SCAFFOLD_1121 unplaced-scaffold na na CDRNFM010000136.1 <> na Primary Assembly 17322 na SCAFFOLD_1129 unplaced-scaffold na na CDRNFM010000137.1 <> na Primary Assembly 17250 na SCAFFOLD_1140 unplaced-scaffold na na CDRNFM010000138.1 <> na Primary Assembly 17082 na SCAFFOLD_1142 unplaced-scaffold na na CDRNFM010000139.1 <> na Primary Assembly 17048 na SCAFFOLD_1162 unplaced-scaffold na na CDRNFM010000140.1 <> na Primary Assembly 16737 na SCAFFOLD_1184 unplaced-scaffold na na CDRNFM010000141.1 <> na Primary Assembly 16486 na SCAFFOLD_1205 unplaced-scaffold na na CDRNFM010000142.1 <> na Primary Assembly 16150 na SCAFFOLD_1247 unplaced-scaffold na na CDRNFM010000143.1 <> na Primary Assembly 15338 na SCAFFOLD_1250 unplaced-scaffold na na CDRNFM010000144.1 <> na Primary Assembly 15284 na SCAFFOLD_1262 unplaced-scaffold na na CDRNFM010000145.1 <> na Primary Assembly 15035 na SCAFFOLD_1265 unplaced-scaffold na na CDRNFM010000146.1 <> na Primary Assembly 14980 na SCAFFOLD_1276 unplaced-scaffold na na CDRNFM010000147.1 <> na Primary Assembly 14761 na SCAFFOLD_1289 unplaced-scaffold na na CDRNFM010000148.1 <> na Primary Assembly 14369 na SCAFFOLD_1305 unplaced-scaffold na na CDRNFM010000149.1 <> na Primary Assembly 13529 na SCAFFOLD_1310 unplaced-scaffold na na CDRNFM010000150.1 <> na Primary Assembly 13273 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ349649.1 <> na non-nuclear 115158 na scaffold_Pltd_1 assembled-molecule Pltd Chloroplast OZ349650.1 <> na non-nuclear 125945 na