# Assembly name: drCraMono1.hap1.1 # Organism name: Crataegus monogyna (eudicots) # Taxid: 140997 # BioSample: SAMEA9143089 # BioProject: PRJEB104360 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2025-12-05 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CDRVLT01 # Assembly method: various # Genome coverage: 85x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_977072135.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_977072134.1 Primary Assembly ## GCA_977072136.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OZ372281.1 <> na Primary Assembly 46889100 na SUPER_2 assembled-molecule 2 Chromosome OZ372282.1 <> na Primary Assembly 44689945 na SUPER_3 assembled-molecule 3 Chromosome OZ372283.1 <> na Primary Assembly 43520301 na SUPER_4 assembled-molecule 4 Chromosome OZ372284.1 <> na Primary Assembly 42884100 na SUPER_5 assembled-molecule 5 Chromosome OZ372285.1 <> na Primary Assembly 42673224 na SUPER_6 assembled-molecule 6 Chromosome OZ372286.1 <> na Primary Assembly 42489134 na SUPER_7 assembled-molecule 7 Chromosome OZ372287.1 <> na Primary Assembly 40318193 na SUPER_8 assembled-molecule 8 Chromosome OZ372288.1 <> na Primary Assembly 39869031 na SUPER_9 assembled-molecule 9 Chromosome OZ372289.1 <> na Primary Assembly 39698589 na SUPER_10 assembled-molecule 10 Chromosome OZ372290.1 <> na Primary Assembly 38773837 na SUPER_11 assembled-molecule 11 Chromosome OZ372291.1 <> na Primary Assembly 38682049 na SUPER_12 assembled-molecule 12 Chromosome OZ372292.1 <> na Primary Assembly 35165567 na SUPER_13 assembled-molecule 13 Chromosome OZ372293.1 <> na Primary Assembly 34879071 na SUPER_14 assembled-molecule 14 Chromosome OZ372294.1 <> na Primary Assembly 34731971 na SUPER_15 assembled-molecule 15 Chromosome OZ372295.1 <> na Primary Assembly 34018100 na SUPER_16 assembled-molecule 16 Chromosome OZ372296.1 <> na Primary Assembly 33084609 na SUPER_17 assembled-molecule 17 Chromosome OZ372297.1 <> na Primary Assembly 31522447 na HAP1_SCAFFOLD_17 unplaced-scaffold na na CDRVLT010000001.1 <> na Primary Assembly 452585 na HAP1_SCAFFOLD_18 unplaced-scaffold na na CDRVLT010000002.1 <> na Primary Assembly 441650 na HAP1_SCAFFOLD_19 unplaced-scaffold na na CDRVLT010000003.1 <> na Primary Assembly 367223 na HAP1_SCAFFOLD_20 unplaced-scaffold na na CDRVLT010000004.1 <> na Primary Assembly 336604 na HAP1_SCAFFOLD_21 unplaced-scaffold na na CDRVLT010000005.1 <> na Primary Assembly 311430 na HAP1_SCAFFOLD_22 unplaced-scaffold na na CDRVLT010000006.1 <> na Primary Assembly 301678 na HAP1_SCAFFOLD_24 unplaced-scaffold na na CDRVLT010000007.1 <> na Primary Assembly 256886 na HAP1_SCAFFOLD_25 unplaced-scaffold na na CDRVLT010000008.1 <> na Primary Assembly 244683 na HAP1_SCAFFOLD_26 unplaced-scaffold na na CDRVLT010000009.1 <> na Primary Assembly 194452 na HAP1_SCAFFOLD_27 unplaced-scaffold na na CDRVLT010000010.1 <> na Primary Assembly 192627 na HAP1_SCAFFOLD_28 unplaced-scaffold na na CDRVLT010000011.1 <> na Primary Assembly 179803 na HAP1_SCAFFOLD_29 unplaced-scaffold na na CDRVLT010000012.1 <> na Primary Assembly 178215 na HAP1_SCAFFOLD_30 unplaced-scaffold na na CDRVLT010000013.1 <> na Primary Assembly 171277 na HAP1_SCAFFOLD_31 unplaced-scaffold na na CDRVLT010000014.1 <> na Primary Assembly 170977 na HAP1_SCAFFOLD_32 unplaced-scaffold na na CDRVLT010000015.1 <> na Primary Assembly 163537 na HAP1_SCAFFOLD_33 unplaced-scaffold na na CDRVLT010000016.1 <> na Primary Assembly 162894 na HAP1_SCAFFOLD_34 unplaced-scaffold na na CDRVLT010000017.1 <> na Primary Assembly 161056 na HAP1_SCAFFOLD_35 unplaced-scaffold na na CDRVLT010000018.1 <> na Primary Assembly 154679 na HAP1_SCAFFOLD_36 unplaced-scaffold na na CDRVLT010000019.1 <> na Primary Assembly 149579 na HAP1_SCAFFOLD_37 unplaced-scaffold na na CDRVLT010000020.1 <> na Primary Assembly 135224 na HAP1_SCAFFOLD_38 unplaced-scaffold na na CDRVLT010000021.1 <> na Primary Assembly 124369 na HAP1_SCAFFOLD_39 unplaced-scaffold na na CDRVLT010000022.1 <> na Primary Assembly 114786 na HAP1_SCAFFOLD_40 unplaced-scaffold na na CDRVLT010000023.1 <> na Primary Assembly 110218 na HAP1_SCAFFOLD_41 unplaced-scaffold na na CDRVLT010000024.1 <> na Primary Assembly 109190 na HAP1_SCAFFOLD_42 unplaced-scaffold na na CDRVLT010000025.1 <> na Primary Assembly 104241 na HAP1_SCAFFOLD_43 unplaced-scaffold na na CDRVLT010000026.1 <> na Primary Assembly 103882 na HAP1_SCAFFOLD_44 unplaced-scaffold na na CDRVLT010000027.1 <> na Primary Assembly 102758 na HAP1_SCAFFOLD_45 unplaced-scaffold na na CDRVLT010000028.1 <> na Primary Assembly 94347 na HAP1_SCAFFOLD_46 unplaced-scaffold na na CDRVLT010000029.1 <> na Primary Assembly 91554 na HAP1_SCAFFOLD_47 unplaced-scaffold na na CDRVLT010000030.1 <> na Primary Assembly 91171 na HAP1_SCAFFOLD_48 unplaced-scaffold na na CDRVLT010000031.1 <> na Primary Assembly 90947 na HAP1_SCAFFOLD_49 unplaced-scaffold na na CDRVLT010000032.1 <> na Primary Assembly 89873 na HAP1_SCAFFOLD_50 unplaced-scaffold na na CDRVLT010000033.1 <> na Primary Assembly 88657 na HAP1_SCAFFOLD_51 unplaced-scaffold na na CDRVLT010000034.1 <> na Primary Assembly 88527 na HAP1_SCAFFOLD_52 unplaced-scaffold na na CDRVLT010000035.1 <> na Primary Assembly 86717 na HAP1_SCAFFOLD_53 unplaced-scaffold na na CDRVLT010000036.1 <> na Primary Assembly 86096 na HAP1_SCAFFOLD_55 unplaced-scaffold na na CDRVLT010000037.1 <> na Primary Assembly 85330 na HAP1_SCAFFOLD_57 unplaced-scaffold na na CDRVLT010000038.1 <> na Primary Assembly 78962 na HAP1_SCAFFOLD_58 unplaced-scaffold na na CDRVLT010000039.1 <> na Primary Assembly 78047 na HAP1_SCAFFOLD_59 unplaced-scaffold na na CDRVLT010000040.1 <> na Primary Assembly 77736 na HAP1_SCAFFOLD_60 unplaced-scaffold na na CDRVLT010000041.1 <> na Primary Assembly 76820 na HAP1_SCAFFOLD_61 unplaced-scaffold na na CDRVLT010000042.1 <> na Primary Assembly 76604 na HAP1_SCAFFOLD_65 unplaced-scaffold na na CDRVLT010000043.1 <> na Primary Assembly 74054 na HAP1_SCAFFOLD_67 unplaced-scaffold na na CDRVLT010000044.1 <> na Primary Assembly 72448 na HAP1_SCAFFOLD_68 unplaced-scaffold na na CDRVLT010000045.1 <> na Primary Assembly 71676 na HAP1_SCAFFOLD_72 unplaced-scaffold na na CDRVLT010000046.1 <> na Primary Assembly 67965 na HAP1_SCAFFOLD_73 unplaced-scaffold na na CDRVLT010000047.1 <> na Primary Assembly 67852 na HAP1_SCAFFOLD_74 unplaced-scaffold na na CDRVLT010000048.1 <> na Primary Assembly 67628 na HAP1_SCAFFOLD_77 unplaced-scaffold na na CDRVLT010000049.1 <> na Primary Assembly 66595 na HAP1_SCAFFOLD_79 unplaced-scaffold na na CDRVLT010000050.1 <> na Primary Assembly 66297 na HAP1_SCAFFOLD_80 unplaced-scaffold na na CDRVLT010000051.1 <> na Primary Assembly 65349 na HAP1_SCAFFOLD_83 unplaced-scaffold na na CDRVLT010000052.1 <> na Primary Assembly 64462 na HAP1_SCAFFOLD_89 unplaced-scaffold na na CDRVLT010000053.1 <> na Primary Assembly 60467 na HAP1_SCAFFOLD_91 unplaced-scaffold na na CDRVLT010000054.1 <> na Primary Assembly 60136 na HAP1_SCAFFOLD_94 unplaced-scaffold na na CDRVLT010000055.1 <> na Primary Assembly 59004 na HAP1_SCAFFOLD_99 unplaced-scaffold na na CDRVLT010000056.1 <> na Primary Assembly 58338 na HAP1_SCAFFOLD_102 unplaced-scaffold na na CDRVLT010000057.1 <> na Primary Assembly 58071 na HAP1_SCAFFOLD_109 unplaced-scaffold na na CDRVLT010000058.1 <> na Primary Assembly 56500 na HAP1_SCAFFOLD_111 unplaced-scaffold na na CDRVLT010000059.1 <> na Primary Assembly 56356 na HAP1_SCAFFOLD_116 unplaced-scaffold na na CDRVLT010000060.1 <> na Primary Assembly 55479 na HAP1_SCAFFOLD_118 unplaced-scaffold na na CDRVLT010000061.1 <> na Primary Assembly 55289 na HAP1_SCAFFOLD_125 unplaced-scaffold na na CDRVLT010000062.1 <> na Primary Assembly 54011 na HAP1_SCAFFOLD_135 unplaced-scaffold na na CDRVLT010000063.1 <> na Primary Assembly 52035 na HAP1_SCAFFOLD_142 unplaced-scaffold na na CDRVLT010000064.1 <> na Primary Assembly 51311 na HAP1_SCAFFOLD_146 unplaced-scaffold na na CDRVLT010000065.1 <> na Primary Assembly 51044 na HAP1_SCAFFOLD_147 unplaced-scaffold na na CDRVLT010000066.1 <> na Primary Assembly 51000 na HAP1_SCAFFOLD_150 unplaced-scaffold na na CDRVLT010000067.1 <> na Primary Assembly 50797 na HAP1_SCAFFOLD_153 unplaced-scaffold na na CDRVLT010000068.1 <> na Primary Assembly 50648 na HAP1_SCAFFOLD_163 unplaced-scaffold na na CDRVLT010000069.1 <> na Primary Assembly 49501 na HAP1_SCAFFOLD_171 unplaced-scaffold na na CDRVLT010000070.1 <> na Primary Assembly 49002 na HAP1_SCAFFOLD_188 unplaced-scaffold na na CDRVLT010000071.1 <> na Primary Assembly 48043 na HAP1_SCAFFOLD_190 unplaced-scaffold na na CDRVLT010000072.1 <> na Primary Assembly 47968 na HAP1_SCAFFOLD_195 unplaced-scaffold na na CDRVLT010000073.1 <> na Primary Assembly 47563 na HAP1_SCAFFOLD_200 unplaced-scaffold na na CDRVLT010000074.1 <> na Primary Assembly 47207 na HAP1_SCAFFOLD_201 unplaced-scaffold na na CDRVLT010000075.1 <> na Primary Assembly 47073 na HAP1_SCAFFOLD_203 unplaced-scaffold na na CDRVLT010000076.1 <> na Primary Assembly 46798 na HAP1_SCAFFOLD_213 unplaced-scaffold na na CDRVLT010000077.1 <> na Primary Assembly 46483 na HAP1_SCAFFOLD_216 unplaced-scaffold na na CDRVLT010000078.1 <> na Primary Assembly 46412 na HAP1_SCAFFOLD_235 unplaced-scaffold na na CDRVLT010000079.1 <> na Primary Assembly 44903 na HAP1_SCAFFOLD_240 unplaced-scaffold na na CDRVLT010000080.1 <> na Primary Assembly 44751 na HAP1_SCAFFOLD_241 unplaced-scaffold na na CDRVLT010000081.1 <> na Primary Assembly 44745 na HAP1_SCAFFOLD_243 unplaced-scaffold na na CDRVLT010000082.1 <> na Primary Assembly 44571 na HAP1_SCAFFOLD_259 unplaced-scaffold na na CDRVLT010000083.1 <> na Primary Assembly 43595 na HAP1_SCAFFOLD_261 unplaced-scaffold na na CDRVLT010000084.1 <> na Primary Assembly 43580 na HAP1_SCAFFOLD_272 unplaced-scaffold na na CDRVLT010000085.1 <> na Primary Assembly 43134 na HAP1_SCAFFOLD_276 unplaced-scaffold na na CDRVLT010000086.1 <> na Primary Assembly 42975 na HAP1_SCAFFOLD_291 unplaced-scaffold na na CDRVLT010000087.1 <> na Primary Assembly 42430 na HAP1_SCAFFOLD_298 unplaced-scaffold na na CDRVLT010000088.1 <> na Primary Assembly 42316 na HAP1_SCAFFOLD_301 unplaced-scaffold na na CDRVLT010000089.1 <> na Primary Assembly 42288 na HAP1_SCAFFOLD_304 unplaced-scaffold na na CDRVLT010000090.1 <> na Primary Assembly 41944 na HAP1_SCAFFOLD_315 unplaced-scaffold na na CDRVLT010000091.1 <> na Primary Assembly 41559 na HAP1_SCAFFOLD_352 unplaced-scaffold na na CDRVLT010000092.1 <> na Primary Assembly 40232 na HAP1_SCAFFOLD_380 unplaced-scaffold na na CDRVLT010000093.1 <> na Primary Assembly 39344 na HAP1_SCAFFOLD_394 unplaced-scaffold na na CDRVLT010000094.1 <> na Primary Assembly 38906 na HAP1_SCAFFOLD_408 unplaced-scaffold na na CDRVLT010000095.1 <> na Primary Assembly 38447 na HAP1_SCAFFOLD_432 unplaced-scaffold na na CDRVLT010000096.1 <> na Primary Assembly 37764 na HAP1_SCAFFOLD_439 unplaced-scaffold na na CDRVLT010000097.1 <> na Primary Assembly 37566 na HAP1_SCAFFOLD_445 unplaced-scaffold na na CDRVLT010000098.1 <> na Primary Assembly 37406 na HAP1_SCAFFOLD_450 unplaced-scaffold na na CDRVLT010000099.1 <> na Primary Assembly 37308 na HAP1_SCAFFOLD_451 unplaced-scaffold na na CDRVLT010000100.1 <> na Primary Assembly 37300 na HAP1_SCAFFOLD_461 unplaced-scaffold na na CDRVLT010000101.1 <> na Primary Assembly 37019 na HAP1_SCAFFOLD_467 unplaced-scaffold na na CDRVLT010000102.1 <> na Primary Assembly 36735 na HAP1_SCAFFOLD_470 unplaced-scaffold na na CDRVLT010000103.1 <> na Primary Assembly 36625 na HAP1_SCAFFOLD_483 unplaced-scaffold na na CDRVLT010000104.1 <> na Primary Assembly 36145 na HAP1_SCAFFOLD_518 unplaced-scaffold na na CDRVLT010000105.1 <> na Primary Assembly 35168 na HAP1_SCAFFOLD_531 unplaced-scaffold na na CDRVLT010000106.1 <> na Primary Assembly 34796 na HAP1_SCAFFOLD_532 unplaced-scaffold na na CDRVLT010000107.1 <> na Primary Assembly 34794 na HAP1_SCAFFOLD_542 unplaced-scaffold na na CDRVLT010000108.1 <> na Primary Assembly 34505 na HAP1_SCAFFOLD_543 unplaced-scaffold na na CDRVLT010000109.1 <> na Primary Assembly 34498 na HAP1_SCAFFOLD_549 unplaced-scaffold na na CDRVLT010000110.1 <> na Primary Assembly 34244 na HAP1_SCAFFOLD_553 unplaced-scaffold na na CDRVLT010000111.1 <> na Primary Assembly 34139 na HAP1_SCAFFOLD_555 unplaced-scaffold na na CDRVLT010000112.1 <> na Primary Assembly 34114 na HAP1_SCAFFOLD_561 unplaced-scaffold na na CDRVLT010000113.1 <> na Primary Assembly 33879 na HAP1_SCAFFOLD_584 unplaced-scaffold na na CDRVLT010000114.1 <> na Primary Assembly 33197 na HAP1_SCAFFOLD_587 unplaced-scaffold na na CDRVLT010000115.1 <> na Primary Assembly 33170 na HAP1_SCAFFOLD_589 unplaced-scaffold na na CDRVLT010000116.1 <> na Primary Assembly 33020 na HAP1_SCAFFOLD_604 unplaced-scaffold na na CDRVLT010000117.1 <> na Primary Assembly 32549 na HAP1_SCAFFOLD_605 unplaced-scaffold na na CDRVLT010000118.1 <> na Primary Assembly 32521 na HAP1_SCAFFOLD_614 unplaced-scaffold na na CDRVLT010000119.1 <> na Primary Assembly 32327 na HAP1_SCAFFOLD_638 unplaced-scaffold na na CDRVLT010000120.1 <> na Primary Assembly 31599 na HAP1_SCAFFOLD_669 unplaced-scaffold na na CDRVLT010000121.1 <> na Primary Assembly 30759 na HAP1_SCAFFOLD_671 unplaced-scaffold na na CDRVLT010000122.1 <> na Primary Assembly 30747 na HAP1_SCAFFOLD_685 unplaced-scaffold na na CDRVLT010000123.1 <> na Primary Assembly 30200 na HAP1_SCAFFOLD_695 unplaced-scaffold na na CDRVLT010000124.1 <> na Primary Assembly 29890 na HAP1_SCAFFOLD_699 unplaced-scaffold na na CDRVLT010000125.1 <> na Primary Assembly 29722 na HAP1_SCAFFOLD_714 unplaced-scaffold na na CDRVLT010000126.1 <> na Primary Assembly 29098 na HAP1_SCAFFOLD_715 unplaced-scaffold na na CDRVLT010000127.1 <> na Primary Assembly 29040 na HAP1_SCAFFOLD_725 unplaced-scaffold na na CDRVLT010000128.1 <> na Primary Assembly 28763 na HAP1_SCAFFOLD_728 unplaced-scaffold na na CDRVLT010000129.1 <> na Primary Assembly 28559 na HAP1_SCAFFOLD_733 unplaced-scaffold na na CDRVLT010000130.1 <> na Primary Assembly 28348 na HAP1_SCAFFOLD_734 unplaced-scaffold na na CDRVLT010000131.1 <> na Primary Assembly 28333 na HAP1_SCAFFOLD_795 unplaced-scaffold na na CDRVLT010000132.1 <> na Primary Assembly 24860 na HAP1_SCAFFOLD_799 unplaced-scaffold na na CDRVLT010000133.1 <> na Primary Assembly 24625 na HAP1_SCAFFOLD_835 unplaced-scaffold na na CDRVLT010000134.1 <> na Primary Assembly 21775 na HAP1_SCAFFOLD_842 unplaced-scaffold na na CDRVLT010000135.1 <> na Primary Assembly 21259 na HAP1_SCAFFOLD_851 unplaced-scaffold na na CDRVLT010000136.1 <> na Primary Assembly 18824 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ372298.1 <> na non-nuclear 465791 na scaffold_Pltd_1 assembled-molecule Pltd Chloroplast OZ372299.1 <> na non-nuclear 159826 na