# Assembly name: daLinRepe1.hap1.1 # Organism name: Linaria repens (eudicots) # Taxid: 299782 # BioSample: SAMEA114565226 # BioProject: PRJEB105144 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2026-02-01 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CDWRBU01 # Assembly method: various # Genome coverage: 59x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_977927345.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_977927344.1 Primary Assembly ## GCA_977927346.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OZ376056.1 <> na Primary Assembly 147623108 na SUPER_2 assembled-molecule 2 Chromosome OZ376057.1 <> na Primary Assembly 139818743 na SUPER_3 assembled-molecule 3 Chromosome OZ376058.1 <> na Primary Assembly 130161852 na SUPER_4 assembled-molecule 4 Chromosome OZ376059.1 <> na Primary Assembly 125040350 na SUPER_5 assembled-molecule 5 Chromosome OZ376060.1 <> na Primary Assembly 111744423 na SUPER_6 assembled-molecule 6 Chromosome OZ376061.1 <> na Primary Assembly 109341431 na HAP1_SCAFFOLD_8 unplaced-scaffold na na CDWRBU010000001.1 <> na Primary Assembly 600000 na HAP1_SCAFFOLD_9 unplaced-scaffold na na CDWRBU010000002.1 <> na Primary Assembly 546223 na HAP1_SCAFFOLD_10 unplaced-scaffold na na CDWRBU010000003.1 <> na Primary Assembly 536562 na HAP1_SCAFFOLD_13 unplaced-scaffold na na CDWRBU010000004.1 <> na Primary Assembly 339505 na HAP1_SCAFFOLD_17 unplaced-scaffold na na CDWRBU010000005.1 <> na Primary Assembly 306594 na HAP1_SCAFFOLD_21 unplaced-scaffold na na CDWRBU010000006.1 <> na Primary Assembly 257000 na HAP1_SCAFFOLD_30 unplaced-scaffold na na CDWRBU010000007.1 <> na Primary Assembly 208015 na HAP1_SCAFFOLD_46 unplaced-scaffold na na CDWRBU010000008.1 <> na Primary Assembly 156042 na HAP1_SCAFFOLD_47 unplaced-scaffold na na CDWRBU010000009.1 <> na Primary Assembly 156000 na HAP1_SCAFFOLD_51 unplaced-scaffold na na CDWRBU010000010.1 <> na Primary Assembly 154000 na HAP1_SCAFFOLD_54 unplaced-scaffold na na CDWRBU010000011.1 <> na Primary Assembly 148214 na HAP1_SCAFFOLD_74 unplaced-scaffold na na CDWRBU010000012.1 <> na Primary Assembly 130442 na HAP1_SCAFFOLD_78 unplaced-scaffold na na CDWRBU010000013.1 <> na Primary Assembly 125211 na HAP1_SCAFFOLD_82 unplaced-scaffold na na CDWRBU010000014.1 <> na Primary Assembly 123629 na HAP1_SCAFFOLD_90 unplaced-scaffold na na CDWRBU010000015.1 <> na Primary Assembly 120000 na HAP1_SCAFFOLD_95 unplaced-scaffold na na CDWRBU010000016.1 <> na Primary Assembly 112142 na HAP1_SCAFFOLD_103 unplaced-scaffold na na CDWRBU010000017.1 <> na Primary Assembly 106000 na HAP1_SCAFFOLD_105 unplaced-scaffold na na CDWRBU010000018.1 <> na Primary Assembly 104843 na HAP1_SCAFFOLD_108 unplaced-scaffold na na CDWRBU010000019.1 <> na Primary Assembly 102608 na HAP1_SCAFFOLD_122 unplaced-scaffold na na CDWRBU010000020.1 <> na Primary Assembly 98000 na HAP1_SCAFFOLD_124 unplaced-scaffold na na CDWRBU010000021.1 <> na Primary Assembly 96000 na HAP1_SCAFFOLD_127 unplaced-scaffold na na CDWRBU010000022.1 <> na Primary Assembly 94932 na HAP1_SCAFFOLD_132 unplaced-scaffold na na CDWRBU010000023.1 <> na Primary Assembly 92724 na HAP1_SCAFFOLD_143 unplaced-scaffold na na CDWRBU010000024.1 <> na Primary Assembly 84249 na HAP1_SCAFFOLD_148 unplaced-scaffold na na CDWRBU010000025.1 <> na Primary Assembly 82967 na HAP1_SCAFFOLD_155 unplaced-scaffold na na CDWRBU010000026.1 <> na Primary Assembly 80891 na HAP1_SCAFFOLD_157 unplaced-scaffold na na CDWRBU010000027.1 <> na Primary Assembly 80709 na HAP1_SCAFFOLD_160 unplaced-scaffold na na CDWRBU010000028.1 <> na Primary Assembly 79431 na HAP1_SCAFFOLD_170 unplaced-scaffold na na CDWRBU010000029.1 <> na Primary Assembly 76329 na HAP1_SCAFFOLD_175 unplaced-scaffold na na CDWRBU010000030.1 <> na Primary Assembly 75000 na HAP1_SCAFFOLD_194 unplaced-scaffold na na CDWRBU010000031.1 <> na Primary Assembly 70365 na HAP1_SCAFFOLD_197 unplaced-scaffold na na CDWRBU010000032.1 <> na Primary Assembly 69543 na HAP1_SCAFFOLD_203 unplaced-scaffold na na CDWRBU010000033.1 <> na Primary Assembly 68012 na HAP1_SCAFFOLD_209 unplaced-scaffold na na CDWRBU010000034.1 <> na Primary Assembly 67000 na HAP1_SCAFFOLD_210 unplaced-scaffold na na CDWRBU010000035.1 <> na Primary Assembly 66771 na HAP1_SCAFFOLD_213 unplaced-scaffold na na CDWRBU010000036.1 <> na Primary Assembly 64511 na HAP1_SCAFFOLD_226 unplaced-scaffold na na CDWRBU010000037.1 <> na Primary Assembly 60598 na HAP1_SCAFFOLD_233 unplaced-scaffold na na CDWRBU010000038.1 <> na Primary Assembly 59178 na HAP1_SCAFFOLD_234 unplaced-scaffold na na CDWRBU010000039.1 <> na Primary Assembly 58954 na HAP1_SCAFFOLD_235 unplaced-scaffold na na CDWRBU010000040.1 <> na Primary Assembly 58693 na HAP1_SCAFFOLD_237 unplaced-scaffold na na CDWRBU010000041.1 <> na Primary Assembly 58579 na HAP1_SCAFFOLD_241 unplaced-scaffold na na CDWRBU010000042.1 <> na Primary Assembly 57549 na HAP1_SCAFFOLD_250 unplaced-scaffold na na CDWRBU010000043.1 <> na Primary Assembly 56000 na HAP1_SCAFFOLD_251 unplaced-scaffold na na CDWRBU010000044.1 <> na Primary Assembly 56000 na HAP1_SCAFFOLD_252 unplaced-scaffold na na CDWRBU010000045.1 <> na Primary Assembly 55603 na HAP1_SCAFFOLD_254 unplaced-scaffold na na CDWRBU010000046.1 <> na Primary Assembly 55237 na HAP1_SCAFFOLD_255 unplaced-scaffold na na CDWRBU010000047.1 <> na Primary Assembly 55137 na HAP1_SCAFFOLD_256 unplaced-scaffold na na CDWRBU010000048.1 <> na Primary Assembly 54995 na HAP1_SCAFFOLD_262 unplaced-scaffold na na CDWRBU010000049.1 <> na Primary Assembly 52673 na HAP1_SCAFFOLD_264 unplaced-scaffold na na CDWRBU010000050.1 <> na Primary Assembly 52000 na HAP1_SCAFFOLD_269 unplaced-scaffold na na CDWRBU010000051.1 <> na Primary Assembly 51000 na HAP1_SCAFFOLD_279 unplaced-scaffold na na CDWRBU010000052.1 <> na Primary Assembly 49690 na HAP1_SCAFFOLD_285 unplaced-scaffold na na CDWRBU010000053.1 <> na Primary Assembly 49088 na HAP1_SCAFFOLD_286 unplaced-scaffold na na CDWRBU010000054.1 <> na Primary Assembly 49029 na HAP1_SCAFFOLD_289 unplaced-scaffold na na CDWRBU010000055.1 <> na Primary Assembly 48865 na HAP1_SCAFFOLD_292 unplaced-scaffold na na CDWRBU010000056.1 <> na Primary Assembly 48161 na HAP1_SCAFFOLD_300 unplaced-scaffold na na CDWRBU010000057.1 <> na Primary Assembly 45396 na HAP1_SCAFFOLD_302 unplaced-scaffold na na CDWRBU010000058.1 <> na Primary Assembly 45230 na HAP1_SCAFFOLD_304 unplaced-scaffold na na CDWRBU010000059.1 <> na Primary Assembly 45070 na HAP1_SCAFFOLD_306 unplaced-scaffold na na CDWRBU010000060.1 <> na Primary Assembly 44886 na HAP1_SCAFFOLD_314 unplaced-scaffold na na CDWRBU010000061.1 <> na Primary Assembly 43438 na HAP1_SCAFFOLD_316 unplaced-scaffold na na CDWRBU010000062.1 <> na Primary Assembly 43350 na HAP1_SCAFFOLD_318 unplaced-scaffold na na CDWRBU010000063.1 <> na Primary Assembly 42896 na HAP1_SCAFFOLD_319 unplaced-scaffold na na CDWRBU010000064.1 <> na Primary Assembly 42741 na HAP1_SCAFFOLD_320 unplaced-scaffold na na CDWRBU010000065.1 <> na Primary Assembly 42696 na HAP1_SCAFFOLD_335 unplaced-scaffold na na CDWRBU010000066.1 <> na Primary Assembly 40099 na HAP1_SCAFFOLD_338 unplaced-scaffold na na CDWRBU010000067.1 <> na Primary Assembly 39641 na HAP1_SCAFFOLD_348 unplaced-scaffold na na CDWRBU010000068.1 <> na Primary Assembly 38717 na HAP1_SCAFFOLD_351 unplaced-scaffold na na CDWRBU010000069.1 <> na Primary Assembly 38551 na HAP1_SCAFFOLD_354 unplaced-scaffold na na CDWRBU010000070.1 <> na Primary Assembly 38235 na HAP1_SCAFFOLD_356 unplaced-scaffold na na CDWRBU010000071.1 <> na Primary Assembly 37582 na HAP1_SCAFFOLD_358 unplaced-scaffold na na CDWRBU010000072.1 <> na Primary Assembly 37290 na HAP1_SCAFFOLD_359 unplaced-scaffold na na CDWRBU010000073.1 <> na Primary Assembly 37276 na HAP1_SCAFFOLD_360 unplaced-scaffold na na CDWRBU010000074.1 <> na Primary Assembly 37117 na HAP1_SCAFFOLD_362 unplaced-scaffold na na CDWRBU010000075.1 <> na Primary Assembly 36952 na HAP1_SCAFFOLD_363 unplaced-scaffold na na CDWRBU010000076.1 <> na Primary Assembly 36867 na HAP1_SCAFFOLD_367 unplaced-scaffold na na CDWRBU010000077.1 <> na Primary Assembly 36712 na HAP1_SCAFFOLD_368 unplaced-scaffold na na CDWRBU010000078.1 <> na Primary Assembly 36664 na HAP1_SCAFFOLD_371 unplaced-scaffold na na CDWRBU010000079.1 <> na Primary Assembly 36469 na HAP1_SCAFFOLD_373 unplaced-scaffold na na CDWRBU010000080.1 <> na Primary Assembly 36391 na HAP1_SCAFFOLD_374 unplaced-scaffold na na CDWRBU010000081.1 <> na Primary Assembly 36285 na HAP1_SCAFFOLD_375 unplaced-scaffold na na CDWRBU010000082.1 <> na Primary Assembly 36250 na HAP1_SCAFFOLD_378 unplaced-scaffold na na CDWRBU010000083.1 <> na Primary Assembly 36076 na HAP1_SCAFFOLD_382 unplaced-scaffold na na CDWRBU010000084.1 <> na Primary Assembly 35787 na HAP1_SCAFFOLD_390 unplaced-scaffold na na CDWRBU010000085.1 <> na Primary Assembly 34908 na HAP1_SCAFFOLD_391 unplaced-scaffold na na CDWRBU010000086.1 <> na Primary Assembly 34861 na HAP1_SCAFFOLD_400 unplaced-scaffold na na CDWRBU010000087.1 <> na Primary Assembly 34621 na HAP1_SCAFFOLD_401 unplaced-scaffold na na CDWRBU010000088.1 <> na Primary Assembly 34559 na HAP1_SCAFFOLD_406 unplaced-scaffold na na CDWRBU010000089.1 <> na Primary Assembly 33914 na HAP1_SCAFFOLD_409 unplaced-scaffold na na CDWRBU010000090.1 <> na Primary Assembly 33577 na HAP1_SCAFFOLD_411 unplaced-scaffold na na CDWRBU010000091.1 <> na Primary Assembly 33466 na HAP1_SCAFFOLD_412 unplaced-scaffold na na CDWRBU010000092.1 <> na Primary Assembly 33465 na HAP1_SCAFFOLD_417 unplaced-scaffold na na CDWRBU010000093.1 <> na Primary Assembly 32838 na HAP1_SCAFFOLD_419 unplaced-scaffold na na CDWRBU010000094.1 <> na Primary Assembly 32793 na HAP1_SCAFFOLD_423 unplaced-scaffold na na CDWRBU010000095.1 <> na Primary Assembly 32534 na HAP1_SCAFFOLD_432 unplaced-scaffold na na CDWRBU010000096.1 <> na Primary Assembly 31697 na HAP1_SCAFFOLD_433 unplaced-scaffold na na CDWRBU010000097.1 <> na Primary Assembly 31614 na HAP1_SCAFFOLD_435 unplaced-scaffold na na CDWRBU010000098.1 <> na Primary Assembly 31508 na HAP1_SCAFFOLD_436 unplaced-scaffold na na CDWRBU010000099.1 <> na Primary Assembly 31504 na HAP1_SCAFFOLD_437 unplaced-scaffold na na CDWRBU010000100.1 <> na Primary Assembly 31423 na HAP1_SCAFFOLD_445 unplaced-scaffold na na CDWRBU010000101.1 <> na Primary Assembly 30907 na HAP1_SCAFFOLD_447 unplaced-scaffold na na CDWRBU010000102.1 <> na Primary Assembly 30872 na HAP1_SCAFFOLD_450 unplaced-scaffold na na CDWRBU010000103.1 <> na Primary Assembly 30443 na HAP1_SCAFFOLD_451 unplaced-scaffold na na CDWRBU010000104.1 <> na Primary Assembly 30442 na HAP1_SCAFFOLD_459 unplaced-scaffold na na CDWRBU010000105.1 <> na Primary Assembly 30179 na HAP1_SCAFFOLD_463 unplaced-scaffold na na CDWRBU010000106.1 <> na Primary Assembly 29932 na HAP1_SCAFFOLD_464 unplaced-scaffold na na CDWRBU010000107.1 <> na Primary Assembly 29909 na HAP1_SCAFFOLD_465 unplaced-scaffold na na CDWRBU010000108.1 <> na Primary Assembly 29596 na HAP1_SCAFFOLD_467 unplaced-scaffold na na CDWRBU010000109.1 <> na Primary Assembly 29423 na HAP1_SCAFFOLD_471 unplaced-scaffold na na CDWRBU010000110.1 <> na Primary Assembly 28573 na HAP1_SCAFFOLD_472 unplaced-scaffold na na CDWRBU010000111.1 <> na Primary Assembly 28534 na HAP1_SCAFFOLD_473 unplaced-scaffold na na CDWRBU010000112.1 <> na Primary Assembly 28522 na HAP1_SCAFFOLD_475 unplaced-scaffold na na CDWRBU010000113.1 <> na Primary Assembly 27900 na HAP1_SCAFFOLD_478 unplaced-scaffold na na CDWRBU010000114.1 <> na Primary Assembly 26615 na HAP1_SCAFFOLD_479 unplaced-scaffold na na CDWRBU010000115.1 <> na Primary Assembly 26552 na HAP1_SCAFFOLD_482 unplaced-scaffold na na CDWRBU010000116.1 <> na Primary Assembly 26087 na HAP1_SCAFFOLD_484 unplaced-scaffold na na CDWRBU010000117.1 <> na Primary Assembly 25719 na HAP1_SCAFFOLD_486 unplaced-scaffold na na CDWRBU010000118.1 <> na Primary Assembly 25564 na HAP1_SCAFFOLD_488 unplaced-scaffold na na CDWRBU010000119.1 <> na Primary Assembly 25494 na HAP1_SCAFFOLD_489 unplaced-scaffold na na CDWRBU010000120.1 <> na Primary Assembly 25441 na HAP1_SCAFFOLD_490 unplaced-scaffold na na CDWRBU010000121.1 <> na Primary Assembly 25410 na HAP1_SCAFFOLD_491 unplaced-scaffold na na CDWRBU010000122.1 <> na Primary Assembly 25376 na HAP1_SCAFFOLD_492 unplaced-scaffold na na CDWRBU010000123.1 <> na Primary Assembly 25363 na HAP1_SCAFFOLD_493 unplaced-scaffold na na CDWRBU010000124.1 <> na Primary Assembly 25081 na HAP1_SCAFFOLD_496 unplaced-scaffold na na CDWRBU010000125.1 <> na Primary Assembly 24811 na HAP1_SCAFFOLD_501 unplaced-scaffold na na CDWRBU010000126.1 <> na Primary Assembly 24002 na HAP1_SCAFFOLD_502 unplaced-scaffold na na CDWRBU010000127.1 <> na Primary Assembly 23856 na HAP1_SCAFFOLD_510 unplaced-scaffold na na CDWRBU010000128.1 <> na Primary Assembly 22299 na HAP1_SCAFFOLD_515 unplaced-scaffold na na CDWRBU010000129.1 <> na Primary Assembly 21280 na HAP1_SCAFFOLD_516 unplaced-scaffold na na CDWRBU010000130.1 <> na Primary Assembly 20241 na HAP1_SCAFFOLD_517 unplaced-scaffold na na CDWRBU010000131.1 <> na Primary Assembly 20196 na HAP1_SCAFFOLD_523 unplaced-scaffold na na CDWRBU010000132.1 <> na Primary Assembly 18704 na HAP1_SCAFFOLD_524 unplaced-scaffold na na CDWRBU010000133.1 <> na Primary Assembly 18600 na HAP1_SCAFFOLD_528 unplaced-scaffold na na CDWRBU010000134.1 <> na Primary Assembly 16382 na HAP1_SCAFFOLD_529 unplaced-scaffold na na CDWRBU010000135.1 <> na Primary Assembly 15671 na HAP1_SCAFFOLD_531 unplaced-scaffold na na CDWRBU010000136.1 <> na Primary Assembly 15053 na HAP1_SCAFFOLD_541 unplaced-scaffold na na CDWRBU010000137.1 <> na Primary Assembly 2000 na HAP1_SCAFFOLD_543 unplaced-scaffold na na CDWRBU010000138.1 <> na Primary Assembly 1000 na HAP1_SCAFFOLD_544 unplaced-scaffold na na CDWRBU010000139.1 <> na Primary Assembly 1000 na HAP1_SCAFFOLD_546 unplaced-scaffold na na CDWRBU010000140.1 <> na Primary Assembly 1000 na HAP1_SCAFFOLD_547 unplaced-scaffold na na CDWRBU010000141.1 <> na Primary Assembly 1000 na HAP1_SCAFFOLD_548 unplaced-scaffold na na CDWRBU010000142.1 <> na Primary Assembly 1000 na HAP1_SCAFFOLD_549 unplaced-scaffold na na CDWRBU010000143.1 <> na Primary Assembly 1000 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ376062.1 <> na non-nuclear 493299 na scaffold_Pltd_1 assembled-molecule Pltd Chloroplast OZ376063.1 <> na non-nuclear 150813 na