# Assembly name: cjScaUndu1.1 # Organism name: Scapania undulata (liverworts) # Taxid: 215256 # BioSample: SAMEA111383289 # BioProject: PRJEB106231 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2026-01-20 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CDXDGK01 # Assembly method: various # Genome coverage: 54x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_978018195.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_978018194.1 Primary Assembly ## GCA_978018196.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OZ389458.1 <> na Primary Assembly 38787653 na SUPER_2 assembled-molecule 2 Chromosome OZ389459.1 <> na Primary Assembly 32370576 na SUPER_3 assembled-molecule 3 Chromosome OZ389460.1 <> na Primary Assembly 29080098 na SUPER_4 assembled-molecule 4 Chromosome OZ389461.1 <> na Primary Assembly 28623087 na SUPER_5 assembled-molecule 5 Chromosome OZ389462.1 <> na Primary Assembly 28524851 na SUPER_6 assembled-molecule 6 Chromosome OZ389463.1 <> na Primary Assembly 28139375 na SUPER_7 assembled-molecule 7 Chromosome OZ389464.1 <> na Primary Assembly 27052217 na SUPER_8 assembled-molecule 8 Chromosome OZ389465.1 <> na Primary Assembly 25087643 na SUPER_9 assembled-molecule 9 Chromosome OZ389466.1 <> na Primary Assembly 10778321 na SCAFFOLD_118 unplaced-scaffold na na CDXDGK010000001.1 <> na Primary Assembly 174782 na SCAFFOLD_314 unplaced-scaffold na na CDXDGK010000002.1 <> na Primary Assembly 72995 na SCAFFOLD_344 unplaced-scaffold na na CDXDGK010000003.1 <> na Primary Assembly 67065 na SCAFFOLD_500 unplaced-scaffold na na CDXDGK010000004.1 <> na Primary Assembly 38709 na SCAFFOLD_547 unplaced-scaffold na na CDXDGK010000005.1 <> na Primary Assembly 34489 na SCAFFOLD_596 unplaced-scaffold na na CDXDGK010000006.1 <> na Primary Assembly 28686 na SCAFFOLD_600 unplaced-scaffold na na CDXDGK010000007.1 <> na Primary Assembly 28350 na SCAFFOLD_605 unplaced-scaffold na na CDXDGK010000008.1 <> na Primary Assembly 28062 na SCAFFOLD_653 unplaced-scaffold na na CDXDGK010000009.1 <> na Primary Assembly 25038 na SCAFFOLD_659 unplaced-scaffold na na CDXDGK010000010.1 <> na Primary Assembly 24604 na SCAFFOLD_679 unplaced-scaffold na na CDXDGK010000011.1 <> na Primary Assembly 23319 na SCAFFOLD_691 unplaced-scaffold na na CDXDGK010000012.1 <> na Primary Assembly 22620 na SCAFFOLD_729 unplaced-scaffold na na CDXDGK010000013.1 <> na Primary Assembly 21075 na SCAFFOLD_739 unplaced-scaffold na na CDXDGK010000014.1 <> na Primary Assembly 20897 na SCAFFOLD_743 unplaced-scaffold na na CDXDGK010000015.1 <> na Primary Assembly 20826 na SCAFFOLD_750 unplaced-scaffold na na CDXDGK010000016.1 <> na Primary Assembly 20664 na SCAFFOLD_756 unplaced-scaffold na na CDXDGK010000017.1 <> na Primary Assembly 20428 na SCAFFOLD_769 unplaced-scaffold na na CDXDGK010000018.1 <> na Primary Assembly 19972 na SCAFFOLD_774 unplaced-scaffold na na CDXDGK010000019.1 <> na Primary Assembly 19772 na SCAFFOLD_777 unplaced-scaffold na na CDXDGK010000020.1 <> na Primary Assembly 19698 na SCAFFOLD_781 unplaced-scaffold na na CDXDGK010000021.1 <> na Primary Assembly 19568 na SCAFFOLD_813 unplaced-scaffold na na CDXDGK010000022.1 <> na Primary Assembly 18854 na SCAFFOLD_831 unplaced-scaffold na na CDXDGK010000023.1 <> na Primary Assembly 18399 na SCAFFOLD_836 unplaced-scaffold na na CDXDGK010000024.1 <> na Primary Assembly 18352 na SCAFFOLD_838 unplaced-scaffold na na CDXDGK010000025.1 <> na Primary Assembly 18316 na SCAFFOLD_839 unplaced-scaffold na na CDXDGK010000026.1 <> na Primary Assembly 18309 na SCAFFOLD_842 unplaced-scaffold na na CDXDGK010000027.1 <> na Primary Assembly 18244 na SCAFFOLD_864 unplaced-scaffold na na CDXDGK010000028.1 <> na Primary Assembly 17786 na SCAFFOLD_868 unplaced-scaffold na na CDXDGK010000029.1 <> na Primary Assembly 17678 na SCAFFOLD_869 unplaced-scaffold na na CDXDGK010000030.1 <> na Primary Assembly 17619 na SCAFFOLD_876 unplaced-scaffold na na CDXDGK010000031.1 <> na Primary Assembly 17505 na SCAFFOLD_879 unplaced-scaffold na na CDXDGK010000032.1 <> na Primary Assembly 17466 na SCAFFOLD_880 unplaced-scaffold na na CDXDGK010000033.1 <> na Primary Assembly 17423 na SCAFFOLD_890 unplaced-scaffold na na CDXDGK010000034.1 <> na Primary Assembly 17164 na SCAFFOLD_897 unplaced-scaffold na na CDXDGK010000035.1 <> na Primary Assembly 17044 na SCAFFOLD_898 unplaced-scaffold na na CDXDGK010000036.1 <> na Primary Assembly 17026 na SCAFFOLD_914 unplaced-scaffold na na CDXDGK010000037.1 <> na Primary Assembly 16637 na SCAFFOLD_933 unplaced-scaffold na na CDXDGK010000038.1 <> na Primary Assembly 16284 na SCAFFOLD_944 unplaced-scaffold na na CDXDGK010000039.1 <> na Primary Assembly 16043 na SCAFFOLD_961 unplaced-scaffold na na CDXDGK010000040.1 <> na Primary Assembly 15703 na SCAFFOLD_988 unplaced-scaffold na na CDXDGK010000041.1 <> na Primary Assembly 14883 na SCAFFOLD_995 unplaced-scaffold na na CDXDGK010000042.1 <> na Primary Assembly 14751 na SCAFFOLD_1026 unplaced-scaffold na na CDXDGK010000043.1 <> na Primary Assembly 14225 na SCAFFOLD_1037 unplaced-scaffold na na CDXDGK010000044.1 <> na Primary Assembly 13941 na SCAFFOLD_1044 unplaced-scaffold na na CDXDGK010000045.1 <> na Primary Assembly 13835 na SCAFFOLD_1080 unplaced-scaffold na na CDXDGK010000046.1 <> na Primary Assembly 12984 na SCAFFOLD_1091 unplaced-scaffold na na CDXDGK010000047.1 <> na Primary Assembly 12681 na SCAFFOLD_1099 unplaced-scaffold na na CDXDGK010000048.1 <> na Primary Assembly 12369 na SCAFFOLD_1123 unplaced-scaffold na na CDXDGK010000049.1 <> na Primary Assembly 11651 na SCAFFOLD_1129 unplaced-scaffold na na CDXDGK010000050.1 <> na Primary Assembly 11328 na SCAFFOLD_1150 unplaced-scaffold na na CDXDGK010000051.1 <> na Primary Assembly 10689 na SCAFFOLD_1157 unplaced-scaffold na na CDXDGK010000052.1 <> na Primary Assembly 10518 na SCAFFOLD_1158 unplaced-scaffold na na CDXDGK010000053.1 <> na Primary Assembly 10491 na SCAFFOLD_1164 unplaced-scaffold na na CDXDGK010000054.1 <> na Primary Assembly 10356 na SCAFFOLD_1168 unplaced-scaffold na na CDXDGK010000055.1 <> na Primary Assembly 10180 na SCAFFOLD_1171 unplaced-scaffold na na CDXDGK010000056.1 <> na Primary Assembly 10121 na SCAFFOLD_1179 unplaced-scaffold na na CDXDGK010000057.1 <> na Primary Assembly 9959 na SCAFFOLD_1184 unplaced-scaffold na na CDXDGK010000058.1 <> na Primary Assembly 9828 na SCAFFOLD_1187 unplaced-scaffold na na CDXDGK010000059.1 <> na Primary Assembly 9686 na SCAFFOLD_1188 unplaced-scaffold na na CDXDGK010000060.1 <> na Primary Assembly 9662 na SCAFFOLD_1190 unplaced-scaffold na na CDXDGK010000061.1 <> na Primary Assembly 9563 na SCAFFOLD_1192 unplaced-scaffold na na CDXDGK010000062.1 <> na Primary Assembly 9516 na SCAFFOLD_1205 unplaced-scaffold na na CDXDGK010000063.1 <> na Primary Assembly 9135 na SCAFFOLD_1206 unplaced-scaffold na na CDXDGK010000064.1 <> na Primary Assembly 9127 na SCAFFOLD_1207 unplaced-scaffold na na CDXDGK010000065.1 <> na Primary Assembly 9101 na SCAFFOLD_1210 unplaced-scaffold na na CDXDGK010000066.1 <> na Primary Assembly 9020 na SCAFFOLD_1213 unplaced-scaffold na na CDXDGK010000067.1 <> na Primary Assembly 8904 na SCAFFOLD_1214 unplaced-scaffold na na CDXDGK010000068.1 <> na Primary Assembly 8868 na SCAFFOLD_1216 unplaced-scaffold na na CDXDGK010000069.1 <> na Primary Assembly 8813 na SCAFFOLD_1217 unplaced-scaffold na na CDXDGK010000070.1 <> na Primary Assembly 8803 na SCAFFOLD_1219 unplaced-scaffold na na CDXDGK010000071.1 <> na Primary Assembly 8757 na SCAFFOLD_1226 unplaced-scaffold na na CDXDGK010000072.1 <> na Primary Assembly 8696 na SCAFFOLD_1229 unplaced-scaffold na na CDXDGK010000073.1 <> na Primary Assembly 8541 na SCAFFOLD_1252 unplaced-scaffold na na CDXDGK010000074.1 <> na Primary Assembly 7534 na SCAFFOLD_1272 unplaced-scaffold na na CDXDGK010000075.1 <> na Primary Assembly 2000 na SCAFFOLD_1273 unplaced-scaffold na na CDXDGK010000076.1 <> na Primary Assembly 1000 na SCAFFOLD_1274 unplaced-scaffold na na CDXDGK010000077.1 <> na Primary Assembly 1000 na SCAFFOLD_1275 unplaced-scaffold na na CDXDGK010000078.1 <> na Primary Assembly 1000 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ389467.1 <> na non-nuclear 141178 na scaffold_Pltd_1 assembled-molecule Pltd Chloroplast OZ389468.1 <> na non-nuclear 117427 na