# Assembly name: dcSilAcau1.hap1.1 # Organism name: Silene acaulis (cushion pink) # Taxid: 39862 # BioSample: SAMEA9335103 # BioProject: PRJEB108752 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2026-03-01 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CEQJDK01 # Assembly method: various # Genome coverage: 63x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_981406025.1 # Linked assembly: GCA_981405375.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_981406024.1 Primary Assembly ## GCA_981406026.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OZ414361.1 <> na Primary Assembly 138492854 na SUPER_2 assembled-molecule 2 Chromosome OZ414362.1 <> na Primary Assembly 122377981 na SUPER_3 assembled-molecule 3 Chromosome OZ414363.1 <> na Primary Assembly 119422041 na SUPER_4 assembled-molecule 4 Chromosome OZ414364.1 <> na Primary Assembly 118714795 na SUPER_5 assembled-molecule 5 Chromosome OZ414365.1 <> na Primary Assembly 109093957 na SUPER_6 assembled-molecule 6 Chromosome OZ414366.1 <> na Primary Assembly 107849797 na SUPER_7 assembled-molecule 7 Chromosome OZ414367.1 <> na Primary Assembly 106565793 na SUPER_8 assembled-molecule 8 Chromosome OZ414368.1 <> na Primary Assembly 102453055 na SUPER_9 assembled-molecule 9 Chromosome OZ414369.1 <> na Primary Assembly 100902501 na SUPER_10 assembled-molecule 10 Chromosome OZ414370.1 <> na Primary Assembly 97831854 na SUPER_11 assembled-molecule 11 Chromosome OZ414371.1 <> na Primary Assembly 95630643 na SUPER_12 assembled-molecule 12 Chromosome OZ414372.1 <> na Primary Assembly 91837109 na HAP1_SCAFFOLD_28 unplaced-scaffold na na CEQJDK010000001.1 <> na Primary Assembly 331225 na HAP1_SCAFFOLD_30 unplaced-scaffold na na CEQJDK010000002.1 <> na Primary Assembly 290732 na HAP1_SCAFFOLD_31 unplaced-scaffold na na CEQJDK010000003.1 <> na Primary Assembly 271168 na HAP1_SCAFFOLD_37 unplaced-scaffold na na CEQJDK010000004.1 <> na Primary Assembly 204053 na HAP1_SCAFFOLD_39 unplaced-scaffold na na CEQJDK010000005.1 <> na Primary Assembly 200840 na HAP1_SCAFFOLD_40 unplaced-scaffold na na CEQJDK010000006.1 <> na Primary Assembly 194372 na HAP1_SCAFFOLD_43 unplaced-scaffold na na CEQJDK010000007.1 <> na Primary Assembly 185961 na HAP1_SCAFFOLD_47 unplaced-scaffold na na CEQJDK010000008.1 <> na Primary Assembly 168899 na HAP1_SCAFFOLD_48 unplaced-scaffold na na CEQJDK010000009.1 <> na Primary Assembly 166842 na HAP1_SCAFFOLD_55 unplaced-scaffold na na CEQJDK010000010.1 <> na Primary Assembly 149707 na HAP1_SCAFFOLD_60 unplaced-scaffold na na CEQJDK010000011.1 <> na Primary Assembly 138741 na HAP1_SCAFFOLD_66 unplaced-scaffold na na CEQJDK010000012.1 <> na Primary Assembly 130370 na HAP1_SCAFFOLD_80 unplaced-scaffold na na CEQJDK010000013.1 <> na Primary Assembly 113071 na HAP1_SCAFFOLD_84 unplaced-scaffold na na CEQJDK010000014.1 <> na Primary Assembly 108406 na HAP1_SCAFFOLD_86 unplaced-scaffold na na CEQJDK010000015.1 <> na Primary Assembly 106078 na HAP1_SCAFFOLD_90 unplaced-scaffold na na CEQJDK010000016.1 <> na Primary Assembly 102542 na HAP1_SCAFFOLD_91 unplaced-scaffold na na CEQJDK010000017.1 <> na Primary Assembly 101898 na HAP1_SCAFFOLD_92 unplaced-scaffold na na CEQJDK010000018.1 <> na Primary Assembly 101919 na HAP1_SCAFFOLD_95 unplaced-scaffold na na CEQJDK010000019.1 <> na Primary Assembly 99905 na HAP1_SCAFFOLD_98 unplaced-scaffold na na CEQJDK010000020.1 <> na Primary Assembly 98993 na HAP1_SCAFFOLD_100 unplaced-scaffold na na CEQJDK010000021.1 <> na Primary Assembly 97267 na HAP1_SCAFFOLD_104 unplaced-scaffold na na CEQJDK010000022.1 <> na Primary Assembly 95230 na HAP1_SCAFFOLD_107 unplaced-scaffold na na CEQJDK010000023.1 <> na Primary Assembly 93842 na HAP1_SCAFFOLD_109 unplaced-scaffold na na CEQJDK010000024.1 <> na Primary Assembly 92004 na HAP1_SCAFFOLD_111 unplaced-scaffold na na CEQJDK010000025.1 <> na Primary Assembly 90103 na HAP1_SCAFFOLD_117 unplaced-scaffold na na CEQJDK010000026.1 <> na Primary Assembly 83889 na HAP1_SCAFFOLD_119 unplaced-scaffold na na CEQJDK010000027.1 <> na Primary Assembly 82720 na HAP1_SCAFFOLD_121 unplaced-scaffold na na CEQJDK010000028.1 <> na Primary Assembly 82185 na HAP1_SCAFFOLD_124 unplaced-scaffold na na CEQJDK010000029.1 <> na Primary Assembly 79912 na HAP1_SCAFFOLD_128 unplaced-scaffold na na CEQJDK010000030.1 <> na Primary Assembly 77560 na HAP1_SCAFFOLD_130 unplaced-scaffold na na CEQJDK010000031.1 <> na Primary Assembly 76453 na HAP1_SCAFFOLD_135 unplaced-scaffold na na CEQJDK010000032.1 <> na Primary Assembly 74433 na HAP1_SCAFFOLD_140 unplaced-scaffold na na CEQJDK010000033.1 <> na Primary Assembly 72788 na HAP1_SCAFFOLD_142 unplaced-scaffold na na CEQJDK010000034.1 <> na Primary Assembly 71148 na HAP1_SCAFFOLD_145 unplaced-scaffold na na CEQJDK010000035.1 <> na Primary Assembly 70334 na HAP1_SCAFFOLD_147 unplaced-scaffold na na CEQJDK010000036.1 <> na Primary Assembly 68510 na HAP1_SCAFFOLD_149 unplaced-scaffold na na CEQJDK010000037.1 <> na Primary Assembly 67468 na HAP1_SCAFFOLD_151 unplaced-scaffold na na CEQJDK010000038.1 <> na Primary Assembly 66831 na HAP1_SCAFFOLD_152 unplaced-scaffold na na CEQJDK010000039.1 <> na Primary Assembly 66548 na HAP1_SCAFFOLD_157 unplaced-scaffold na na CEQJDK010000040.1 <> na Primary Assembly 66469 na HAP1_SCAFFOLD_160 unplaced-scaffold na na CEQJDK010000041.1 <> na Primary Assembly 65979 na HAP1_SCAFFOLD_163 unplaced-scaffold na na CEQJDK010000042.1 <> na Primary Assembly 65416 na HAP1_SCAFFOLD_165 unplaced-scaffold na na CEQJDK010000043.1 <> na Primary Assembly 65103 na HAP1_SCAFFOLD_178 unplaced-scaffold na na CEQJDK010000044.1 <> na Primary Assembly 61073 na HAP1_SCAFFOLD_184 unplaced-scaffold na na CEQJDK010000045.1 <> na Primary Assembly 60000 na HAP1_SCAFFOLD_186 unplaced-scaffold na na CEQJDK010000046.1 <> na Primary Assembly 59533 na HAP1_SCAFFOLD_190 unplaced-scaffold na na CEQJDK010000047.1 <> na Primary Assembly 59179 na HAP1_SCAFFOLD_194 unplaced-scaffold na na CEQJDK010000048.1 <> na Primary Assembly 58465 na HAP1_SCAFFOLD_197 unplaced-scaffold na na CEQJDK010000049.1 <> na Primary Assembly 57822 na HAP1_SCAFFOLD_201 unplaced-scaffold na na CEQJDK010000050.1 <> na Primary Assembly 57349 na HAP1_SCAFFOLD_204 unplaced-scaffold na na CEQJDK010000051.1 <> na Primary Assembly 57102 na HAP1_SCAFFOLD_205 unplaced-scaffold na na CEQJDK010000052.1 <> na Primary Assembly 57102 na HAP1_SCAFFOLD_206 unplaced-scaffold na na CEQJDK010000053.1 <> na Primary Assembly 57003 na HAP1_SCAFFOLD_210 unplaced-scaffold na na CEQJDK010000054.1 <> na Primary Assembly 56096 na HAP1_SCAFFOLD_211 unplaced-scaffold na na CEQJDK010000055.1 <> na Primary Assembly 55706 na HAP1_SCAFFOLD_217 unplaced-scaffold na na CEQJDK010000056.1 <> na Primary Assembly 55160 na HAP1_SCAFFOLD_230 unplaced-scaffold na na CEQJDK010000057.1 <> na Primary Assembly 54000 na HAP1_SCAFFOLD_238 unplaced-scaffold na na CEQJDK010000058.1 <> na Primary Assembly 53361 na HAP1_SCAFFOLD_241 unplaced-scaffold na na CEQJDK010000059.1 <> na Primary Assembly 53038 na HAP1_SCAFFOLD_243 unplaced-scaffold na na CEQJDK010000060.1 <> na Primary Assembly 53003 na HAP1_SCAFFOLD_257 unplaced-scaffold na na CEQJDK010000061.1 <> na Primary Assembly 51754 na HAP1_SCAFFOLD_261 unplaced-scaffold na na CEQJDK010000062.1 <> na Primary Assembly 51051 na HAP1_SCAFFOLD_272 unplaced-scaffold na na CEQJDK010000063.1 <> na Primary Assembly 49669 na HAP1_SCAFFOLD_277 unplaced-scaffold na na CEQJDK010000064.1 <> na Primary Assembly 49416 na HAP1_SCAFFOLD_297 unplaced-scaffold na na CEQJDK010000065.1 <> na Primary Assembly 47995 na HAP1_SCAFFOLD_298 unplaced-scaffold na na CEQJDK010000066.1 <> na Primary Assembly 47919 na HAP1_SCAFFOLD_302 unplaced-scaffold na na CEQJDK010000067.1 <> na Primary Assembly 47844 na HAP1_SCAFFOLD_307 unplaced-scaffold na na CEQJDK010000068.1 <> na Primary Assembly 47422 na HAP1_SCAFFOLD_309 unplaced-scaffold na na CEQJDK010000069.1 <> na Primary Assembly 47274 na HAP1_SCAFFOLD_320 unplaced-scaffold na na CEQJDK010000070.1 <> na Primary Assembly 46742 na HAP1_SCAFFOLD_322 unplaced-scaffold na na CEQJDK010000071.1 <> na Primary Assembly 46597 na HAP1_SCAFFOLD_324 unplaced-scaffold na na CEQJDK010000072.1 <> na Primary Assembly 46493 na HAP1_SCAFFOLD_329 unplaced-scaffold na na CEQJDK010000073.1 <> na Primary Assembly 46153 na HAP1_SCAFFOLD_332 unplaced-scaffold na na CEQJDK010000074.1 <> na Primary Assembly 45781 na HAP1_SCAFFOLD_336 unplaced-scaffold na na CEQJDK010000075.1 <> na Primary Assembly 45581 na HAP1_SCAFFOLD_338 unplaced-scaffold na na CEQJDK010000076.1 <> na Primary Assembly 45528 na HAP1_SCAFFOLD_340 unplaced-scaffold na na CEQJDK010000077.1 <> na Primary Assembly 45475 na HAP1_SCAFFOLD_344 unplaced-scaffold na na CEQJDK010000078.1 <> na Primary Assembly 45183 na HAP1_SCAFFOLD_348 unplaced-scaffold na na CEQJDK010000079.1 <> na Primary Assembly 45010 na HAP1_SCAFFOLD_351 unplaced-scaffold na na CEQJDK010000080.1 <> na Primary Assembly 44858 na HAP1_SCAFFOLD_356 unplaced-scaffold na na CEQJDK010000081.1 <> na Primary Assembly 44608 na HAP1_SCAFFOLD_377 unplaced-scaffold na na CEQJDK010000082.1 <> na Primary Assembly 43718 na HAP1_SCAFFOLD_378 unplaced-scaffold na na CEQJDK010000083.1 <> na Primary Assembly 43688 na HAP1_SCAFFOLD_387 unplaced-scaffold na na CEQJDK010000084.1 <> na Primary Assembly 43299 na HAP1_SCAFFOLD_388 unplaced-scaffold na na CEQJDK010000085.1 <> na Primary Assembly 43174 na HAP1_SCAFFOLD_389 unplaced-scaffold na na CEQJDK010000086.1 <> na Primary Assembly 43110 na HAP1_SCAFFOLD_394 unplaced-scaffold na na CEQJDK010000087.1 <> na Primary Assembly 42861 na HAP1_SCAFFOLD_402 unplaced-scaffold na na CEQJDK010000088.1 <> na Primary Assembly 42348 na HAP1_SCAFFOLD_406 unplaced-scaffold na na CEQJDK010000089.1 <> na Primary Assembly 42149 na HAP1_SCAFFOLD_408 unplaced-scaffold na na CEQJDK010000090.1 <> na Primary Assembly 42097 na HAP1_SCAFFOLD_409 unplaced-scaffold na na CEQJDK010000091.1 <> na Primary Assembly 42092 na HAP1_SCAFFOLD_424 unplaced-scaffold na na CEQJDK010000092.1 <> na Primary Assembly 41585 na HAP1_SCAFFOLD_425 unplaced-scaffold na na CEQJDK010000093.1 <> na Primary Assembly 41566 na HAP1_SCAFFOLD_430 unplaced-scaffold na na CEQJDK010000094.1 <> na Primary Assembly 41442 na HAP1_SCAFFOLD_432 unplaced-scaffold na na CEQJDK010000095.1 <> na Primary Assembly 41356 na HAP1_SCAFFOLD_434 unplaced-scaffold na na CEQJDK010000096.1 <> na Primary Assembly 41247 na HAP1_SCAFFOLD_447 unplaced-scaffold na na CEQJDK010000097.1 <> na Primary Assembly 40599 na HAP1_SCAFFOLD_453 unplaced-scaffold na na CEQJDK010000098.1 <> na Primary Assembly 40295 na HAP1_SCAFFOLD_460 unplaced-scaffold na na CEQJDK010000099.1 <> na Primary Assembly 40080 na HAP1_SCAFFOLD_478 unplaced-scaffold na na CEQJDK010000100.1 <> na Primary Assembly 39599 na HAP1_SCAFFOLD_482 unplaced-scaffold na na CEQJDK010000101.1 <> na Primary Assembly 39454 na HAP1_SCAFFOLD_497 unplaced-scaffold na na CEQJDK010000102.1 <> na Primary Assembly 38952 na HAP1_SCAFFOLD_507 unplaced-scaffold na na CEQJDK010000103.1 <> na Primary Assembly 38320 na HAP1_SCAFFOLD_512 unplaced-scaffold na na CEQJDK010000104.1 <> na Primary Assembly 38188 na HAP1_SCAFFOLD_516 unplaced-scaffold na na CEQJDK010000105.1 <> na Primary Assembly 38092 na HAP1_SCAFFOLD_521 unplaced-scaffold na na CEQJDK010000106.1 <> na Primary Assembly 37972 na HAP1_SCAFFOLD_524 unplaced-scaffold na na CEQJDK010000107.1 <> na Primary Assembly 37743 na HAP1_SCAFFOLD_540 unplaced-scaffold na na CEQJDK010000108.1 <> na Primary Assembly 37385 na HAP1_SCAFFOLD_547 unplaced-scaffold na na CEQJDK010000109.1 <> na Primary Assembly 37051 na HAP1_SCAFFOLD_555 unplaced-scaffold na na CEQJDK010000110.1 <> na Primary Assembly 36841 na HAP1_SCAFFOLD_558 unplaced-scaffold na na CEQJDK010000111.1 <> na Primary Assembly 36758 na HAP1_SCAFFOLD_570 unplaced-scaffold na na CEQJDK010000112.1 <> na Primary Assembly 36384 na HAP1_SCAFFOLD_573 unplaced-scaffold na na CEQJDK010000113.1 <> na Primary Assembly 36367 na HAP1_SCAFFOLD_589 unplaced-scaffold na na CEQJDK010000114.1 <> na Primary Assembly 35693 na HAP1_SCAFFOLD_593 unplaced-scaffold na na CEQJDK010000115.1 <> na Primary Assembly 35571 na HAP1_SCAFFOLD_608 unplaced-scaffold na na CEQJDK010000116.1 <> na Primary Assembly 35285 na HAP1_SCAFFOLD_610 unplaced-scaffold na na CEQJDK010000117.1 <> na Primary Assembly 35247 na HAP1_SCAFFOLD_612 unplaced-scaffold na na CEQJDK010000118.1 <> na Primary Assembly 35200 na HAP1_SCAFFOLD_621 unplaced-scaffold na na CEQJDK010000119.1 <> na Primary Assembly 35004 na HAP1_SCAFFOLD_632 unplaced-scaffold na na CEQJDK010000120.1 <> na Primary Assembly 34714 na HAP1_SCAFFOLD_648 unplaced-scaffold na na CEQJDK010000121.1 <> na Primary Assembly 34293 na HAP1_SCAFFOLD_667 unplaced-scaffold na na CEQJDK010000122.1 <> na Primary Assembly 33827 na HAP1_SCAFFOLD_680 unplaced-scaffold na na CEQJDK010000123.1 <> na Primary Assembly 33561 na HAP1_SCAFFOLD_713 unplaced-scaffold na na CEQJDK010000124.1 <> na Primary Assembly 32671 na HAP1_SCAFFOLD_745 unplaced-scaffold na na CEQJDK010000125.1 <> na Primary Assembly 31828 na HAP1_SCAFFOLD_749 unplaced-scaffold na na CEQJDK010000126.1 <> na Primary Assembly 31802 na HAP1_SCAFFOLD_762 unplaced-scaffold na na CEQJDK010000127.1 <> na Primary Assembly 31506 na HAP1_SCAFFOLD_782 unplaced-scaffold na na CEQJDK010000128.1 <> na Primary Assembly 31153 na HAP1_SCAFFOLD_795 unplaced-scaffold na na CEQJDK010000129.1 <> na Primary Assembly 30818 na HAP1_SCAFFOLD_804 unplaced-scaffold na na CEQJDK010000130.1 <> na Primary Assembly 30579 na HAP1_SCAFFOLD_831 unplaced-scaffold na na CEQJDK010000131.1 <> na Primary Assembly 29947 na HAP1_SCAFFOLD_842 unplaced-scaffold na na CEQJDK010000132.1 <> na Primary Assembly 29719 na HAP1_SCAFFOLD_848 unplaced-scaffold na na CEQJDK010000133.1 <> na Primary Assembly 29611 na HAP1_SCAFFOLD_849 unplaced-scaffold na na CEQJDK010000134.1 <> na Primary Assembly 29610 na HAP1_SCAFFOLD_871 unplaced-scaffold na na CEQJDK010000135.1 <> na Primary Assembly 28902 na HAP1_SCAFFOLD_880 unplaced-scaffold na na CEQJDK010000136.1 <> na Primary Assembly 28680 na HAP1_SCAFFOLD_894 unplaced-scaffold na na CEQJDK010000137.1 <> na Primary Assembly 28345 na HAP1_SCAFFOLD_897 unplaced-scaffold na na CEQJDK010000138.1 <> na Primary Assembly 28320 na HAP1_SCAFFOLD_901 unplaced-scaffold na na CEQJDK010000139.1 <> na Primary Assembly 28192 na HAP1_SCAFFOLD_925 unplaced-scaffold na na CEQJDK010000140.1 <> na Primary Assembly 27810 na HAP1_SCAFFOLD_936 unplaced-scaffold na na CEQJDK010000141.1 <> na Primary Assembly 27530 na HAP1_SCAFFOLD_942 unplaced-scaffold na na CEQJDK010000142.1 <> na Primary Assembly 27279 na HAP1_SCAFFOLD_951 unplaced-scaffold na na CEQJDK010000143.1 <> na Primary Assembly 27098 na HAP1_SCAFFOLD_1008 unplaced-scaffold na na CEQJDK010000144.1 <> na Primary Assembly 25279 na HAP1_SCAFFOLD_1112 unplaced-scaffold na na CEQJDK010000145.1 <> na Primary Assembly 22032 na HAP1_SCAFFOLD_1124 unplaced-scaffold na na CEQJDK010000146.1 <> na Primary Assembly 21579 na HAP1_SCAFFOLD_1139 unplaced-scaffold na na CEQJDK010000147.1 <> na Primary Assembly 20763 na HAP1_SCAFFOLD_1221 unplaced-scaffold na na CEQJDK010000148.1 <> na Primary Assembly 1000 na scaffold_MT_1 assembled-molecule MT1 Mitochondrion OZ414373.1 <> na non-nuclear 1421305 na scaffold_MT_2 assembled-molecule MT2 Mitochondrion OZ414374.1 <> na non-nuclear 177813 na scaffold_Pltd_1 assembled-molecule Pltd Chloroplast OZ414375.1 <> na non-nuclear 151786 na