# Assembly name: csSphSqua2.1 # Organism name: Sphagnum squarrosum (mosses) # Taxid: 128240 # BioSample: SAMEA114782747 # BioProject: PRJEB113652 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2026-06-17 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CFHFWJ01 # Assembly method: various # Genome coverage: 291x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_984577395.1 # ## Assembly-Unit names: ## Primary Assembly ## non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OZ476923.1 <> na Primary Assembly 31195498 na SUPER_2 assembled-molecule 2 Chromosome OZ476924.1 <> na Primary Assembly 30847924 na SUPER_3 assembled-molecule 3 Chromosome OZ476925.1 <> na Primary Assembly 24663854 na SUPER_4 assembled-molecule 4 Chromosome OZ476926.1 <> na Primary Assembly 23277522 na SUPER_5 assembled-molecule 5 Chromosome OZ476927.1 <> na Primary Assembly 23118664 na SUPER_6 assembled-molecule 6 Chromosome OZ476928.1 <> na Primary Assembly 22635152 na SUPER_7 assembled-molecule 7 Chromosome OZ476929.1 <> na Primary Assembly 22365408 na SUPER_8 assembled-molecule 8 Chromosome OZ476930.1 <> na Primary Assembly 21511164 na SUPER_9 assembled-molecule 9 Chromosome OZ476931.1 <> na Primary Assembly 18683313 na SUPER_10 assembled-molecule 10 Chromosome OZ476932.1 <> na Primary Assembly 18625704 na SUPER_11 assembled-molecule 11 Chromosome OZ476933.1 <> na Primary Assembly 18505518 na SUPER_12 assembled-molecule 12 Chromosome OZ476934.1 <> na Primary Assembly 18503548 na SUPER_13 assembled-molecule 13 Chromosome OZ476935.1 <> na Primary Assembly 17356865 na SUPER_14 assembled-molecule 14 Chromosome OZ476936.1 <> na Primary Assembly 17315900 na SUPER_15 assembled-molecule 15 Chromosome OZ476937.1 <> na Primary Assembly 16790772 na SUPER_16 assembled-molecule 16 Chromosome OZ476938.1 <> na Primary Assembly 16434307 na SUPER_17 assembled-molecule 17 Chromosome OZ476939.1 <> na Primary Assembly 16397079 na SUPER_18 assembled-molecule 18 Chromosome OZ476940.1 <> na Primary Assembly 15723189 na SUPER_19 assembled-molecule 19 Chromosome OZ476941.1 <> na Primary Assembly 15457093 na SUPER_20 assembled-molecule 20 Chromosome OZ476942.1 <> na Primary Assembly 3618866 na SUPER_21 assembled-molecule 21 Chromosome OZ476943.1 <> na Primary Assembly 1987113 na SUPER_22 assembled-molecule 22 Chromosome OZ476944.1 <> na Primary Assembly 1659490 na SUPER_21_unloc_1 unlocalized-scaffold 21 Chromosome CFHFWJ010000001.1 <> na Primary Assembly 112993 na SCAFFOLD_34 unplaced-scaffold na na CFHFWJ010000002.1 <> na Primary Assembly 81093 na SCAFFOLD_42 unplaced-scaffold na na CFHFWJ010000003.1 <> na Primary Assembly 61698 na SCAFFOLD_54 unplaced-scaffold na na CFHFWJ010000004.1 <> na Primary Assembly 40858 na SCAFFOLD_56 unplaced-scaffold na na CFHFWJ010000005.1 <> na Primary Assembly 36689 na SCAFFOLD_57 unplaced-scaffold na na CFHFWJ010000006.1 <> na Primary Assembly 35086 na SCAFFOLD_60 unplaced-scaffold na na CFHFWJ010000007.1 <> na Primary Assembly 34968 na SCAFFOLD_61 unplaced-scaffold na na CFHFWJ010000008.1 <> na Primary Assembly 34606 na SCAFFOLD_63 unplaced-scaffold na na CFHFWJ010000009.1 <> na Primary Assembly 32697 na SCAFFOLD_64 unplaced-scaffold na na CFHFWJ010000010.1 <> na Primary Assembly 32481 na SCAFFOLD_65 unplaced-scaffold na na CFHFWJ010000011.1 <> na Primary Assembly 32423 na SCAFFOLD_66 unplaced-scaffold na na CFHFWJ010000012.1 <> na Primary Assembly 32364 na SCAFFOLD_67 unplaced-scaffold na na CFHFWJ010000013.1 <> na Primary Assembly 31928 na SCAFFOLD_68 unplaced-scaffold na na CFHFWJ010000014.1 <> na Primary Assembly 30716 na SCAFFOLD_69 unplaced-scaffold na na CFHFWJ010000015.1 <> na Primary Assembly 30368 na SCAFFOLD_70 unplaced-scaffold na na CFHFWJ010000016.1 <> na Primary Assembly 29577 na SCAFFOLD_76 unplaced-scaffold na na CFHFWJ010000017.1 <> na Primary Assembly 28143 na SCAFFOLD_77 unplaced-scaffold na na CFHFWJ010000018.1 <> na Primary Assembly 27794 na SCAFFOLD_84 unplaced-scaffold na na CFHFWJ010000019.1 <> na Primary Assembly 26750 na SCAFFOLD_85 unplaced-scaffold na na CFHFWJ010000020.1 <> na Primary Assembly 26571 na SCAFFOLD_91 unplaced-scaffold na na CFHFWJ010000021.1 <> na Primary Assembly 26026 na SCAFFOLD_96 unplaced-scaffold na na CFHFWJ010000022.1 <> na Primary Assembly 25402 na SCAFFOLD_99 unplaced-scaffold na na CFHFWJ010000023.1 <> na Primary Assembly 25115 na SCAFFOLD_100 unplaced-scaffold na na CFHFWJ010000024.1 <> na Primary Assembly 25100 na SCAFFOLD_101 unplaced-scaffold na na CFHFWJ010000025.1 <> na Primary Assembly 24933 na SCAFFOLD_111 unplaced-scaffold na na CFHFWJ010000026.1 <> na Primary Assembly 23606 na SCAFFOLD_112 unplaced-scaffold na na CFHFWJ010000027.1 <> na Primary Assembly 23590 na SCAFFOLD_113 unplaced-scaffold na na CFHFWJ010000028.1 <> na Primary Assembly 23551 na SCAFFOLD_115 unplaced-scaffold na na CFHFWJ010000029.1 <> na Primary Assembly 23428 na SCAFFOLD_117 unplaced-scaffold na na CFHFWJ010000030.1 <> na Primary Assembly 23294 na SCAFFOLD_120 unplaced-scaffold na na CFHFWJ010000031.1 <> na Primary Assembly 22965 na SCAFFOLD_125 unplaced-scaffold na na CFHFWJ010000032.1 <> na Primary Assembly 22738 na SCAFFOLD_128 unplaced-scaffold na na CFHFWJ010000033.1 <> na Primary Assembly 22611 na SCAFFOLD_129 unplaced-scaffold na na CFHFWJ010000034.1 <> na Primary Assembly 22588 na SCAFFOLD_130 unplaced-scaffold na na CFHFWJ010000035.1 <> na Primary Assembly 22577 na SCAFFOLD_131 unplaced-scaffold na na CFHFWJ010000036.1 <> na Primary Assembly 22572 na SCAFFOLD_132 unplaced-scaffold na na CFHFWJ010000037.1 <> na Primary Assembly 22564 na SCAFFOLD_135 unplaced-scaffold na na CFHFWJ010000038.1 <> na Primary Assembly 22313 na SCAFFOLD_138 unplaced-scaffold na na CFHFWJ010000039.1 <> na Primary Assembly 22093 na SCAFFOLD_140 unplaced-scaffold na na CFHFWJ010000040.1 <> na Primary Assembly 22049 na SCAFFOLD_142 unplaced-scaffold na na CFHFWJ010000041.1 <> na Primary Assembly 22010 na SCAFFOLD_144 unplaced-scaffold na na CFHFWJ010000042.1 <> na Primary Assembly 21958 na SCAFFOLD_145 unplaced-scaffold na na CFHFWJ010000043.1 <> na Primary Assembly 21912 na SCAFFOLD_146 unplaced-scaffold na na CFHFWJ010000044.1 <> na Primary Assembly 21897 na SCAFFOLD_147 unplaced-scaffold na na CFHFWJ010000045.1 <> na Primary Assembly 21785 na SCAFFOLD_148 unplaced-scaffold na na CFHFWJ010000046.1 <> na Primary Assembly 21730 na SCAFFOLD_150 unplaced-scaffold na na CFHFWJ010000047.1 <> na Primary Assembly 21683 na SCAFFOLD_151 unplaced-scaffold na na CFHFWJ010000048.1 <> na Primary Assembly 21642 na SCAFFOLD_152 unplaced-scaffold na na CFHFWJ010000049.1 <> na Primary Assembly 21591 na SCAFFOLD_153 unplaced-scaffold na na CFHFWJ010000050.1 <> na Primary Assembly 21582 na SCAFFOLD_154 unplaced-scaffold na na CFHFWJ010000051.1 <> na Primary Assembly 21568 na SCAFFOLD_157 unplaced-scaffold na na CFHFWJ010000052.1 <> na Primary Assembly 21459 na SCAFFOLD_169 unplaced-scaffold na na CFHFWJ010000053.1 <> na Primary Assembly 20799 na SCAFFOLD_173 unplaced-scaffold na na CFHFWJ010000054.1 <> na Primary Assembly 20596 na SCAFFOLD_175 unplaced-scaffold na na CFHFWJ010000055.1 <> na Primary Assembly 20543 na SCAFFOLD_178 unplaced-scaffold na na CFHFWJ010000056.1 <> na Primary Assembly 20356 na SCAFFOLD_179 unplaced-scaffold na na CFHFWJ010000057.1 <> na Primary Assembly 20339 na SCAFFOLD_183 unplaced-scaffold na na CFHFWJ010000058.1 <> na Primary Assembly 20041 na SCAFFOLD_184 unplaced-scaffold na na CFHFWJ010000059.1 <> na Primary Assembly 19863 na SCAFFOLD_187 unplaced-scaffold na na CFHFWJ010000060.1 <> na Primary Assembly 19790 na SCAFFOLD_188 unplaced-scaffold na na CFHFWJ010000061.1 <> na Primary Assembly 19736 na SCAFFOLD_192 unplaced-scaffold na na CFHFWJ010000062.1 <> na Primary Assembly 19542 na SCAFFOLD_196 unplaced-scaffold na na CFHFWJ010000063.1 <> na Primary Assembly 19207 na SCAFFOLD_200 unplaced-scaffold na na CFHFWJ010000064.1 <> na Primary Assembly 18991 na SCAFFOLD_202 unplaced-scaffold na na CFHFWJ010000065.1 <> na Primary Assembly 18922 na SCAFFOLD_204 unplaced-scaffold na na CFHFWJ010000066.1 <> na Primary Assembly 18875 na SCAFFOLD_205 unplaced-scaffold na na CFHFWJ010000067.1 <> na Primary Assembly 18832 na SCAFFOLD_212 unplaced-scaffold na na CFHFWJ010000068.1 <> na Primary Assembly 18576 na SCAFFOLD_215 unplaced-scaffold na na CFHFWJ010000069.1 <> na Primary Assembly 18474 na SCAFFOLD_221 unplaced-scaffold na na CFHFWJ010000070.1 <> na Primary Assembly 18144 na SCAFFOLD_222 unplaced-scaffold na na CFHFWJ010000071.1 <> na Primary Assembly 18123 na SCAFFOLD_223 unplaced-scaffold na na CFHFWJ010000072.1 <> na Primary Assembly 18120 na SCAFFOLD_225 unplaced-scaffold na na CFHFWJ010000073.1 <> na Primary Assembly 18085 na SCAFFOLD_226 unplaced-scaffold na na CFHFWJ010000074.1 <> na Primary Assembly 18038 na SCAFFOLD_230 unplaced-scaffold na na CFHFWJ010000075.1 <> na Primary Assembly 17936 na SCAFFOLD_231 unplaced-scaffold na na CFHFWJ010000076.1 <> na Primary Assembly 17934 na SCAFFOLD_232 unplaced-scaffold na na CFHFWJ010000077.1 <> na Primary Assembly 17807 na SCAFFOLD_236 unplaced-scaffold na na CFHFWJ010000078.1 <> na Primary Assembly 17522 na SCAFFOLD_238 unplaced-scaffold na na CFHFWJ010000079.1 <> na Primary Assembly 17462 na SCAFFOLD_240 unplaced-scaffold na na CFHFWJ010000080.1 <> na Primary Assembly 17399 na SCAFFOLD_243 unplaced-scaffold na na CFHFWJ010000081.1 <> na Primary Assembly 17266 na SCAFFOLD_246 unplaced-scaffold na na CFHFWJ010000082.1 <> na Primary Assembly 17075 na SCAFFOLD_247 unplaced-scaffold na na CFHFWJ010000083.1 <> na Primary Assembly 17053 na SCAFFOLD_249 unplaced-scaffold na na CFHFWJ010000084.1 <> na Primary Assembly 16905 na SCAFFOLD_253 unplaced-scaffold na na CFHFWJ010000085.1 <> na Primary Assembly 16775 na SCAFFOLD_254 unplaced-scaffold na na CFHFWJ010000086.1 <> na Primary Assembly 16631 na SCAFFOLD_256 unplaced-scaffold na na CFHFWJ010000087.1 <> na Primary Assembly 16567 na SCAFFOLD_261 unplaced-scaffold na na CFHFWJ010000088.1 <> na Primary Assembly 16309 na SCAFFOLD_264 unplaced-scaffold na na CFHFWJ010000089.1 <> na Primary Assembly 16278 na SCAFFOLD_266 unplaced-scaffold na na CFHFWJ010000090.1 <> na Primary Assembly 16171 na SCAFFOLD_272 unplaced-scaffold na na CFHFWJ010000091.1 <> na Primary Assembly 15857 na SCAFFOLD_278 unplaced-scaffold na na CFHFWJ010000092.1 <> na Primary Assembly 15494 na SCAFFOLD_279 unplaced-scaffold na na CFHFWJ010000093.1 <> na Primary Assembly 15470 na SCAFFOLD_282 unplaced-scaffold na na CFHFWJ010000094.1 <> na Primary Assembly 15405 na SCAFFOLD_283 unplaced-scaffold na na CFHFWJ010000095.1 <> na Primary Assembly 15271 na SCAFFOLD_284 unplaced-scaffold na na CFHFWJ010000096.1 <> na Primary Assembly 15270 na SCAFFOLD_287 unplaced-scaffold na na CFHFWJ010000097.1 <> na Primary Assembly 15134 na SCAFFOLD_289 unplaced-scaffold na na CFHFWJ010000098.1 <> na Primary Assembly 15106 na SCAFFOLD_290 unplaced-scaffold na na CFHFWJ010000099.1 <> na Primary Assembly 15079 na SCAFFOLD_291 unplaced-scaffold na na CFHFWJ010000100.1 <> na Primary Assembly 15060 na SCAFFOLD_293 unplaced-scaffold na na CFHFWJ010000101.1 <> na Primary Assembly 14989 na SCAFFOLD_296 unplaced-scaffold na na CFHFWJ010000102.1 <> na Primary Assembly 14872 na SCAFFOLD_301 unplaced-scaffold na na CFHFWJ010000103.1 <> na Primary Assembly 14130 na SCAFFOLD_302 unplaced-scaffold na na CFHFWJ010000104.1 <> na Primary Assembly 14056 na SCAFFOLD_305 unplaced-scaffold na na CFHFWJ010000105.1 <> na Primary Assembly 13887 na SCAFFOLD_308 unplaced-scaffold na na CFHFWJ010000106.1 <> na Primary Assembly 13757 na SCAFFOLD_312 unplaced-scaffold na na CFHFWJ010000107.1 <> na Primary Assembly 13593 na SCAFFOLD_314 unplaced-scaffold na na CFHFWJ010000108.1 <> na Primary Assembly 13433 na SCAFFOLD_315 unplaced-scaffold na na CFHFWJ010000109.1 <> na Primary Assembly 13432 na SCAFFOLD_316 unplaced-scaffold na na CFHFWJ010000110.1 <> na Primary Assembly 13369 na SCAFFOLD_319 unplaced-scaffold na na CFHFWJ010000111.1 <> na Primary Assembly 13318 na SCAFFOLD_320 unplaced-scaffold na na CFHFWJ010000112.1 <> na Primary Assembly 13272 na SCAFFOLD_321 unplaced-scaffold na na CFHFWJ010000113.1 <> na Primary Assembly 13251 na SCAFFOLD_323 unplaced-scaffold na na CFHFWJ010000114.1 <> na Primary Assembly 12996 na SCAFFOLD_324 unplaced-scaffold na na CFHFWJ010000115.1 <> na Primary Assembly 12983 na SCAFFOLD_325 unplaced-scaffold na na CFHFWJ010000116.1 <> na Primary Assembly 12787 na SCAFFOLD_328 unplaced-scaffold na na CFHFWJ010000117.1 <> na Primary Assembly 12388 na SCAFFOLD_330 unplaced-scaffold na na CFHFWJ010000118.1 <> na Primary Assembly 12237 na SCAFFOLD_331 unplaced-scaffold na na CFHFWJ010000119.1 <> na Primary Assembly 12020 na SCAFFOLD_332 unplaced-scaffold na na CFHFWJ010000120.1 <> na Primary Assembly 11638 na SCAFFOLD_334 unplaced-scaffold na na CFHFWJ010000121.1 <> na Primary Assembly 11407 na SCAFFOLD_335 unplaced-scaffold na na CFHFWJ010000122.1 <> na Primary Assembly 11292 na SCAFFOLD_336 unplaced-scaffold na na CFHFWJ010000123.1 <> na Primary Assembly 10341 na SCAFFOLD_340 unplaced-scaffold na na CFHFWJ010000124.1 <> na Primary Assembly 8566 na SCAFFOLD_342 unplaced-scaffold na na CFHFWJ010000125.1 <> na Primary Assembly 2000 na H_1 unplaced-scaffold na na CFHFWJ010000126.1 <> na Primary Assembly 92012 na H_2 unplaced-scaffold na na CFHFWJ010000127.1 <> na Primary Assembly 77307 na H_3 unplaced-scaffold na na CFHFWJ010000128.1 <> na Primary Assembly 77048 na H_4 unplaced-scaffold na na CFHFWJ010000129.1 <> na Primary Assembly 46260 na H_5 unplaced-scaffold na na CFHFWJ010000130.1 <> na Primary Assembly 43625 na H_6 unplaced-scaffold na na CFHFWJ010000131.1 <> na Primary Assembly 35070 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ476945.1 <> na non-nuclear 141700 na scaffold_Pltd_1 assembled-molecule Pltd Chloroplast OZ476946.1 <> na non-nuclear 139055 na