# Assembly name: cjSouToph1.1 # Organism name: Southbya tophacea (liverworts) # Taxid: 680291 # BioSample: SAMEA117801518 # BioProject: PRJEB114274 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2026-07-10 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CFIQMN01 # Assembly method: various # Genome coverage: 43x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_984652775.1 # ## Assembly-Unit names: ## Primary Assembly ## non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OZ479404.1 <> na Primary Assembly 204802318 na SUPER_2 assembled-molecule 2 Chromosome OZ479405.1 <> na Primary Assembly 180751761 na SUPER_3 assembled-molecule 3 Chromosome OZ479406.1 <> na Primary Assembly 171837805 na SUPER_4 assembled-molecule 4 Chromosome OZ479407.1 <> na Primary Assembly 163944340 na SUPER_5 assembled-molecule 5 Chromosome OZ479408.1 <> na Primary Assembly 124103644 na SUPER_6 assembled-molecule 6 Chromosome OZ479409.1 <> na Primary Assembly 107426982 na SUPER_7 assembled-molecule 7 Chromosome OZ479410.1 <> na Primary Assembly 102975774 na SUPER_8 assembled-molecule 8 Chromosome OZ479411.1 <> na Primary Assembly 79842784 na SCAFFOLD_10 unplaced-scaffold na na CFIQMN010000001.1 <> na Primary Assembly 9101857 na SCAFFOLD_11 unplaced-scaffold na na CFIQMN010000002.1 <> na Primary Assembly 6712298 na SCAFFOLD_18 unplaced-scaffold na na CFIQMN010000003.1 <> na Primary Assembly 3177860 na SCAFFOLD_19 unplaced-scaffold na na CFIQMN010000004.1 <> na Primary Assembly 2734309 na SCAFFOLD_34 unplaced-scaffold na na CFIQMN010000005.1 <> na Primary Assembly 1158681 na SCAFFOLD_46 unplaced-scaffold na na CFIQMN010000006.1 <> na Primary Assembly 758182 na SCAFFOLD_210 unplaced-scaffold na na CFIQMN010000007.1 <> na Primary Assembly 162419 na SCAFFOLD_293 unplaced-scaffold na na CFIQMN010000008.1 <> na Primary Assembly 112449 na SCAFFOLD_296 unplaced-scaffold na na CFIQMN010000009.1 <> na Primary Assembly 109816 na SCAFFOLD_373 unplaced-scaffold na na CFIQMN010000010.1 <> na Primary Assembly 86099 na SCAFFOLD_380 unplaced-scaffold na na CFIQMN010000011.1 <> na Primary Assembly 84332 na SCAFFOLD_429 unplaced-scaffold na na CFIQMN010000012.1 <> na Primary Assembly 71041 na SCAFFOLD_475 unplaced-scaffold na na CFIQMN010000013.1 <> na Primary Assembly 63898 na SCAFFOLD_629 unplaced-scaffold na na CFIQMN010000014.1 <> na Primary Assembly 47304 na SCAFFOLD_705 unplaced-scaffold na na CFIQMN010000015.1 <> na Primary Assembly 41857 na SCAFFOLD_924 unplaced-scaffold na na CFIQMN010000016.1 <> na Primary Assembly 34564 na SCAFFOLD_969 unplaced-scaffold na na CFIQMN010000017.1 <> na Primary Assembly 33652 na SCAFFOLD_1069 unplaced-scaffold na na CFIQMN010000018.1 <> na Primary Assembly 31378 na SCAFFOLD_1171 unplaced-scaffold na na CFIQMN010000019.1 <> na Primary Assembly 29790 na SCAFFOLD_1173 unplaced-scaffold na na CFIQMN010000020.1 <> na Primary Assembly 29735 na SCAFFOLD_1239 unplaced-scaffold na na CFIQMN010000021.1 <> na Primary Assembly 28614 na SCAFFOLD_1341 unplaced-scaffold na na CFIQMN010000022.1 <> na Primary Assembly 27294 na SCAFFOLD_1342 unplaced-scaffold na na CFIQMN010000023.1 <> na Primary Assembly 27288 na SCAFFOLD_1354 unplaced-scaffold na na CFIQMN010000024.1 <> na Primary Assembly 27117 na SCAFFOLD_1365 unplaced-scaffold na na CFIQMN010000025.1 <> na Primary Assembly 26925 na SCAFFOLD_1369 unplaced-scaffold na na CFIQMN010000026.1 <> na Primary Assembly 26906 na SCAFFOLD_1571 unplaced-scaffold na na CFIQMN010000027.1 <> na Primary Assembly 24551 na SCAFFOLD_1595 unplaced-scaffold na na CFIQMN010000028.1 <> na Primary Assembly 24288 na SCAFFOLD_1711 unplaced-scaffold na na CFIQMN010000029.1 <> na Primary Assembly 23157 na SCAFFOLD_1847 unplaced-scaffold na na CFIQMN010000030.1 <> na Primary Assembly 22123 na SCAFFOLD_1853 unplaced-scaffold na na CFIQMN010000031.1 <> na Primary Assembly 22053 na SCAFFOLD_2008 unplaced-scaffold na na CFIQMN010000032.1 <> na Primary Assembly 21076 na SCAFFOLD_2052 unplaced-scaffold na na CFIQMN010000033.1 <> na Primary Assembly 20840 na SCAFFOLD_2065 unplaced-scaffold na na CFIQMN010000034.1 <> na Primary Assembly 20765 na SCAFFOLD_2114 unplaced-scaffold na na CFIQMN010000035.1 <> na Primary Assembly 20456 na SCAFFOLD_2215 unplaced-scaffold na na CFIQMN010000036.1 <> na Primary Assembly 19857 na SCAFFOLD_2245 unplaced-scaffold na na CFIQMN010000037.1 <> na Primary Assembly 19672 na SCAFFOLD_2255 unplaced-scaffold na na CFIQMN010000038.1 <> na Primary Assembly 19619 na SCAFFOLD_2327 unplaced-scaffold na na CFIQMN010000039.1 <> na Primary Assembly 19179 na SCAFFOLD_2413 unplaced-scaffold na na CFIQMN010000040.1 <> na Primary Assembly 18702 na SCAFFOLD_2454 unplaced-scaffold na na CFIQMN010000041.1 <> na Primary Assembly 18529 na SCAFFOLD_2467 unplaced-scaffold na na CFIQMN010000042.1 <> na Primary Assembly 18488 na SCAFFOLD_2487 unplaced-scaffold na na CFIQMN010000043.1 <> na Primary Assembly 18414 na SCAFFOLD_2603 unplaced-scaffold na na CFIQMN010000044.1 <> na Primary Assembly 17893 na SCAFFOLD_2623 unplaced-scaffold na na CFIQMN010000045.1 <> na Primary Assembly 17815 na SCAFFOLD_2644 unplaced-scaffold na na CFIQMN010000046.1 <> na Primary Assembly 17725 na SCAFFOLD_2692 unplaced-scaffold na na CFIQMN010000047.1 <> na Primary Assembly 17477 na SCAFFOLD_2714 unplaced-scaffold na na CFIQMN010000048.1 <> na Primary Assembly 17378 na SCAFFOLD_2724 unplaced-scaffold na na CFIQMN010000049.1 <> na Primary Assembly 17350 na SCAFFOLD_2741 unplaced-scaffold na na CFIQMN010000050.1 <> na Primary Assembly 17284 na SCAFFOLD_2768 unplaced-scaffold na na CFIQMN010000051.1 <> na Primary Assembly 17124 na SCAFFOLD_2809 unplaced-scaffold na na CFIQMN010000052.1 <> na Primary Assembly 16929 na SCAFFOLD_2830 unplaced-scaffold na na CFIQMN010000053.1 <> na Primary Assembly 16821 na SCAFFOLD_2947 unplaced-scaffold na na CFIQMN010000054.1 <> na Primary Assembly 16416 na SCAFFOLD_2981 unplaced-scaffold na na CFIQMN010000055.1 <> na Primary Assembly 16317 na SCAFFOLD_3009 unplaced-scaffold na na CFIQMN010000056.1 <> na Primary Assembly 16216 na SCAFFOLD_3019 unplaced-scaffold na na CFIQMN010000057.1 <> na Primary Assembly 16185 na SCAFFOLD_3219 unplaced-scaffold na na CFIQMN010000058.1 <> na Primary Assembly 15506 na SCAFFOLD_3407 unplaced-scaffold na na CFIQMN010000059.1 <> na Primary Assembly 14937 na SCAFFOLD_3454 unplaced-scaffold na na CFIQMN010000060.1 <> na Primary Assembly 14761 na SCAFFOLD_3488 unplaced-scaffold na na CFIQMN010000061.1 <> na Primary Assembly 14673 na SCAFFOLD_3641 unplaced-scaffold na na CFIQMN010000062.1 <> na Primary Assembly 14169 na SCAFFOLD_3778 unplaced-scaffold na na CFIQMN010000063.1 <> na Primary Assembly 13784 na SCAFFOLD_3821 unplaced-scaffold na na CFIQMN010000064.1 <> na Primary Assembly 13650 na SCAFFOLD_3867 unplaced-scaffold na na CFIQMN010000065.1 <> na Primary Assembly 13526 na SCAFFOLD_3879 unplaced-scaffold na na CFIQMN010000066.1 <> na Primary Assembly 13510 na SCAFFOLD_3889 unplaced-scaffold na na CFIQMN010000067.1 <> na Primary Assembly 13481 na SCAFFOLD_3963 unplaced-scaffold na na CFIQMN010000068.1 <> na Primary Assembly 13285 na SCAFFOLD_3987 unplaced-scaffold na na CFIQMN010000069.1 <> na Primary Assembly 13233 na SCAFFOLD_4033 unplaced-scaffold na na CFIQMN010000070.1 <> na Primary Assembly 13114 na SCAFFOLD_4092 unplaced-scaffold na na CFIQMN010000071.1 <> na Primary Assembly 12924 na SCAFFOLD_4156 unplaced-scaffold na na CFIQMN010000072.1 <> na Primary Assembly 12706 na SCAFFOLD_4213 unplaced-scaffold na na CFIQMN010000073.1 <> na Primary Assembly 12565 na SCAFFOLD_4382 unplaced-scaffold na na CFIQMN010000074.1 <> na Primary Assembly 12117 na SCAFFOLD_4470 unplaced-scaffold na na CFIQMN010000075.1 <> na Primary Assembly 11869 na SCAFFOLD_4501 unplaced-scaffold na na CFIQMN010000076.1 <> na Primary Assembly 11769 na SCAFFOLD_4539 unplaced-scaffold na na CFIQMN010000077.1 <> na Primary Assembly 11685 na SCAFFOLD_4868 unplaced-scaffold na na CFIQMN010000078.1 <> na Primary Assembly 10753 na SCAFFOLD_4960 unplaced-scaffold na na CFIQMN010000079.1 <> na Primary Assembly 10499 na SCAFFOLD_5061 unplaced-scaffold na na CFIQMN010000080.1 <> na Primary Assembly 10099 na SCAFFOLD_5168 unplaced-scaffold na na CFIQMN010000081.1 <> na Primary Assembly 9784 na SCAFFOLD_5228 unplaced-scaffold na na CFIQMN010000082.1 <> na Primary Assembly 9586 na SCAFFOLD_5433 unplaced-scaffold na na CFIQMN010000083.1 <> na Primary Assembly 8698 na SCAFFOLD_5525 unplaced-scaffold na na CFIQMN010000084.1 <> na Primary Assembly 8243 na SCAFFOLD_5823 unplaced-scaffold na na CFIQMN010000085.1 <> na Primary Assembly 1000 na H_1 unplaced-scaffold na na CFIQMN010000086.1 <> na Primary Assembly 942805 na H_2 unplaced-scaffold na na CFIQMN010000087.1 <> na Primary Assembly 107742 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ479412.1 <> na non-nuclear 165620 na scaffold_Pltd_1 assembled-molecule Pltd Chloroplast OZ479413.1 <> na non-nuclear 119729 na