# Assembly name: bCalAlp1.hap1.1 # Organism name: Calidris alpina (dunlin) # Taxid: 8919 # BioSample: SAMEA118680293 # BioProject: PRJEB122699 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2026-09-08 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CFWXSY01 # Assembly method: various # Genome coverage: 50x # Sequencing technology: Oxford Nanopore,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_987196145.1 # Linked assembly: GCA_987197185.1 (haplotype 2) # ## Assembly-Unit names: ## Primary Assembly ## non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OZ499347.1 <> na Primary Assembly 140085777 na SUPER_2 assembled-molecule 2 Chromosome OZ499348.1 <> na Primary Assembly 75540690 na SUPER_3 assembled-molecule 3 Chromosome OZ499349.1 <> na Primary Assembly 74997172 na SUPER_4 assembled-molecule 4 Chromosome OZ499350.1 <> na Primary Assembly 55347378 na SUPER_5 assembled-molecule 5 Chromosome OZ499351.1 <> na Primary Assembly 46967153 na SUPER_6 assembled-molecule 6 Chromosome OZ499352.1 <> na Primary Assembly 44200793 na SUPER_7 assembled-molecule 7 Chromosome OZ499353.1 <> na Primary Assembly 44158171 na SUPER_8 assembled-molecule 8 Chromosome OZ499354.1 <> na Primary Assembly 39097143 na SUPER_9 assembled-molecule 9 Chromosome OZ499355.1 <> na Primary Assembly 35272565 na SUPER_10 assembled-molecule 10 Chromosome OZ499356.1 <> na Primary Assembly 34787143 na SUPER_11 assembled-molecule 11 Chromosome OZ499357.1 <> na Primary Assembly 34269098 na SUPER_12 assembled-molecule 12 Chromosome OZ499358.1 <> na Primary Assembly 33306549 na SUPER_13 assembled-molecule 13 Chromosome OZ499359.1 <> na Primary Assembly 31936202 na SUPER_14 assembled-molecule 14 Chromosome OZ499360.1 <> na Primary Assembly 31413891 na SUPER_15 assembled-molecule 15 Chromosome OZ499361.1 <> na Primary Assembly 29718223 na SUPER_16 assembled-molecule 16 Chromosome OZ499362.1 <> na Primary Assembly 28484238 na SUPER_17 assembled-molecule 17 Chromosome OZ499363.1 <> na Primary Assembly 25688794 na SUPER_18 assembled-molecule 18 Chromosome OZ499364.1 <> na Primary Assembly 25200091 na SUPER_19 assembled-molecule 19 Chromosome OZ499365.1 <> na Primary Assembly 23626786 na SUPER_20 assembled-molecule 20 Chromosome OZ499366.1 <> na Primary Assembly 23028107 na SUPER_21 assembled-molecule 21 Chromosome OZ499367.1 <> na Primary Assembly 21844287 na SUPER_22 assembled-molecule 22 Chromosome OZ499368.1 <> na Primary Assembly 20736827 na SUPER_23 assembled-molecule 23 Chromosome OZ499369.1 <> na Primary Assembly 19769288 na SUPER_24 assembled-molecule 24 Chromosome OZ499370.1 <> na Primary Assembly 17730027 na SUPER_25 assembled-molecule 25 Chromosome OZ499371.1 <> na Primary Assembly 17344976 na SUPER_26 assembled-molecule 26 Chromosome OZ499372.1 <> na Primary Assembly 14256015 na SUPER_27 assembled-molecule 27 Chromosome OZ499373.1 <> na Primary Assembly 13303337 na SUPER_28 assembled-molecule 28 Chromosome OZ499374.1 <> na Primary Assembly 12946407 na SUPER_29 assembled-molecule 29 Chromosome OZ499375.1 <> na Primary Assembly 9601767 na SUPER_30 assembled-molecule 30 Chromosome OZ499376.1 <> na Primary Assembly 9401864 na SUPER_31 assembled-molecule 31 Chromosome OZ499377.1 <> na Primary Assembly 9271601 na SUPER_32 assembled-molecule 32 Chromosome OZ499378.1 <> na Primary Assembly 8758443 na SUPER_33 assembled-molecule 33 Chromosome OZ499379.1 <> na Primary Assembly 8256216 na SUPER_34 assembled-molecule 34 Chromosome OZ499380.1 <> na Primary Assembly 7010319 na SUPER_35 assembled-molecule 35 Chromosome OZ499381.1 <> na Primary Assembly 6665410 na SUPER_36 assembled-molecule 36 Chromosome OZ499382.1 <> na Primary Assembly 5113797 na SUPER_37 assembled-molecule 37 Chromosome OZ499383.1 <> na Primary Assembly 5038678 na SUPER_38 assembled-molecule 38 Chromosome OZ499384.1 <> na Primary Assembly 5029277 na SUPER_39 assembled-molecule 39 Chromosome OZ499385.1 <> na Primary Assembly 4487442 na SUPER_40 assembled-molecule 40 Chromosome OZ499386.1 <> na Primary Assembly 4486957 na SUPER_41 assembled-molecule 41 Chromosome OZ499387.1 <> na Primary Assembly 4358449 na SUPER_42 assembled-molecule 42 Chromosome OZ499388.1 <> na Primary Assembly 4131209 na SUPER_43 assembled-molecule 43 Chromosome OZ499389.1 <> na Primary Assembly 3960633 na SUPER_44 assembled-molecule 44 Chromosome OZ499390.1 <> na Primary Assembly 3620253 na SUPER_45 assembled-molecule 45 Chromosome OZ499391.1 <> na Primary Assembly 3618532 na SUPER_46 assembled-molecule 46 Chromosome OZ499392.1 <> na Primary Assembly 3465505 na SUPER_47 assembled-molecule 47 Chromosome OZ499393.1 <> na Primary Assembly 2795377 na SUPER_Z assembled-molecule Z Chromosome OZ499394.1 <> na Primary Assembly 95795714 na HAP1_SCAFFOLD_51 unplaced-scaffold na na CFWXSY010000001.1 <> na Primary Assembly 1610033 na HAP1_SCAFFOLD_52 unplaced-scaffold na na CFWXSY010000002.1 <> na Primary Assembly 1164531 na HAP1_SCAFFOLD_53 unplaced-scaffold na na CFWXSY010000003.1 <> na Primary Assembly 976333 na HAP1_SCAFFOLD_55 unplaced-scaffold na na CFWXSY010000004.1 <> na Primary Assembly 760631 na HAP1_SCAFFOLD_56 unplaced-scaffold na na CFWXSY010000005.1 <> na Primary Assembly 700691 na HAP1_SCAFFOLD_57 unplaced-scaffold na na CFWXSY010000006.1 <> na Primary Assembly 496113 na HAP1_SCAFFOLD_58 unplaced-scaffold na na CFWXSY010000007.1 <> na Primary Assembly 176146 na HAP1_SCAFFOLD_59 unplaced-scaffold na na CFWXSY010000008.1 <> na Primary Assembly 166330 na HAP1_SCAFFOLD_60 unplaced-scaffold na na CFWXSY010000009.1 <> na Primary Assembly 133340 na HAP1_SCAFFOLD_61 unplaced-scaffold na na CFWXSY010000010.1 <> na Primary Assembly 127620 na HAP1_SCAFFOLD_62 unplaced-scaffold na na CFWXSY010000011.1 <> na Primary Assembly 110483 na HAP1_SCAFFOLD_63 unplaced-scaffold na na CFWXSY010000012.1 <> na Primary Assembly 103566 na HAP1_SCAFFOLD_64 unplaced-scaffold na na CFWXSY010000013.1 <> na Primary Assembly 100422 na HAP1_SCAFFOLD_65 unplaced-scaffold na na CFWXSY010000014.1 <> na Primary Assembly 89692 na HAP1_SCAFFOLD_66 unplaced-scaffold na na CFWXSY010000015.1 <> na Primary Assembly 83000 na HAP1_SCAFFOLD_67 unplaced-scaffold na na CFWXSY010000016.1 <> na Primary Assembly 67546 na HAP1_SCAFFOLD_69 unplaced-scaffold na na CFWXSY010000017.1 <> na Primary Assembly 10574 na HAP1_SCAFFOLD_70 unplaced-scaffold na na CFWXSY010000018.1 <> na Primary Assembly 7975 na HAP1_SCAFFOLD_71 unplaced-scaffold na na CFWXSY010000019.1 <> na Primary Assembly 6155 na HAP1_SCAFFOLD_72 unplaced-scaffold na na CFWXSY010000020.1 <> na Primary Assembly 3969 na HAP1_SCAFFOLD_73 unplaced-scaffold na na CFWXSY010000021.1 <> na Primary Assembly 3310 na HAP1_SCAFFOLD_74 unplaced-scaffold na na CFWXSY010000022.1 <> na Primary Assembly 3176 na HAP1_SCAFFOLD_75 unplaced-scaffold na na CFWXSY010000023.1 <> na Primary Assembly 3042 na HAP1_SCAFFOLD_76 unplaced-scaffold na na CFWXSY010000024.1 <> na Primary Assembly 2119 na HAP1_SCAFFOLD_77 unplaced-scaffold na na CFWXSY010000025.1 <> na Primary Assembly 2012 na HAP1_SCAFFOLD_78 unplaced-scaffold na na CFWXSY010000026.1 <> na Primary Assembly 1463 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ499395.1 <> na non-nuclear 19131 na