# Assembly name: bOenOen1.hap1.1 # Organism name: Oenanthe oenanthe (Northern wheatear) # Taxid: 279966 # BioSample: SAMEA118680313 # BioProject: PRJEB123535 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2026-09-08 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CFXSAN01 # Assembly method: various # Genome coverage: 49x # Sequencing technology: Oxford Nanopore,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_987359165.1 # Linked assembly: GCA_987359185.1 (haplotype 2) # ## Assembly-Unit names: ## Primary Assembly ## non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1_HAP1 assembled-molecule 1 Chromosome OZ506006.1 <> na Primary Assembly 157500512 na SUPER_2_HAP1 assembled-molecule 2 Chromosome OZ506007.1 <> na Primary Assembly 126819058 na SUPER_3_HAP1 assembled-molecule 3 Chromosome OZ506008.1 <> na Primary Assembly 121783683 na SUPER_4_HAP1 assembled-molecule 4 Chromosome OZ506009.1 <> na Primary Assembly 82002227 na SUPER_5_HAP1 assembled-molecule 5 Chromosome OZ506010.1 <> na Primary Assembly 78960976 na SUPER_6_HAP1 assembled-molecule 6 Chromosome OZ506011.1 <> na Primary Assembly 71826620 na SUPER_7_HAP1 assembled-molecule 7 Chromosome OZ506012.1 <> na Primary Assembly 43191474 na SUPER_8_HAP1 assembled-molecule 8 Chromosome OZ506013.1 <> na Primary Assembly 39108969 na SUPER_9_HAP1 assembled-molecule 9 Chromosome OZ506014.1 <> na Primary Assembly 34836861 na SUPER_10_HAP1 assembled-molecule 10 Chromosome OZ506015.1 <> na Primary Assembly 29565540 na SUPER_11_HAP1 assembled-molecule 11 Chromosome OZ506016.1 <> na Primary Assembly 23677290 na SUPER_12_HAP1 assembled-molecule 12 Chromosome OZ506017.1 <> na Primary Assembly 23365095 na SUPER_13_HAP1 assembled-molecule 13 Chromosome OZ506018.1 <> na Primary Assembly 22422624 na SUPER_14_HAP1 assembled-molecule 14 Chromosome OZ506019.1 <> na Primary Assembly 21924709 na SUPER_15_HAP1 assembled-molecule 15 Chromosome OZ506020.1 <> na Primary Assembly 20781533 na SUPER_16_HAP1 assembled-molecule 16 Chromosome OZ506021.1 <> na Primary Assembly 17011663 na SUPER_17_HAP1 assembled-molecule 17 Chromosome OZ506022.1 <> na Primary Assembly 16770407 na SUPER_18_HAP1 assembled-molecule 18 Chromosome OZ506023.1 <> na Primary Assembly 15893397 na SUPER_19_HAP1 assembled-molecule 19 Chromosome OZ506024.1 <> na Primary Assembly 14887494 na SUPER_20_HAP1 assembled-molecule 20 Chromosome OZ506025.1 <> na Primary Assembly 13396668 na SUPER_21_HAP1 assembled-molecule 21 Chromosome OZ506026.1 <> na Primary Assembly 12959058 na SUPER_22_HAP1 assembled-molecule 22 Chromosome OZ506027.1 <> na Primary Assembly 12343163 na SUPER_23_HAP1 assembled-molecule 23 Chromosome OZ506028.1 <> na Primary Assembly 11634560 na SUPER_24_HAP1 assembled-molecule 24 Chromosome OZ506029.1 <> na Primary Assembly 11147786 na SUPER_25_HAP1 assembled-molecule 25 Chromosome OZ506030.1 <> na Primary Assembly 10609216 na SUPER_26_HAP1 assembled-molecule 26 Chromosome OZ506031.1 <> na Primary Assembly 10602489 na SUPER_27_HAP1 assembled-molecule 27 Chromosome OZ506032.1 <> na Primary Assembly 9757930 na SUPER_28_HAP1 assembled-molecule 28 Chromosome OZ506033.1 <> na Primary Assembly 9306302 na SUPER_29_HAP1 assembled-molecule 29 Chromosome OZ506034.1 <> na Primary Assembly 9137207 na SUPER_30_HAP1 assembled-molecule 30 Chromosome OZ506035.1 <> na Primary Assembly 9051880 na SUPER_31_HAP1 assembled-molecule 31 Chromosome OZ506036.1 <> na Primary Assembly 8842084 na SUPER_32_HAP1 assembled-molecule 32 Chromosome OZ506037.1 <> na Primary Assembly 8768275 na SUPER_33_HAP1 assembled-molecule 33 Chromosome OZ506038.1 <> na Primary Assembly 8746374 na SUPER_34_HAP1 assembled-molecule 34 Chromosome OZ506039.1 <> na Primary Assembly 8729191 na SUPER_35_HAP1 assembled-molecule 35 Chromosome OZ506040.1 <> na Primary Assembly 8615343 na SUPER_36_HAP1 assembled-molecule 36 Chromosome OZ506041.1 <> na Primary Assembly 8231851 na SUPER_37_HAP1 assembled-molecule 37 Chromosome OZ506042.1 <> na Primary Assembly 8161594 na SUPER_38_HAP1 assembled-molecule 38 Chromosome OZ506043.1 <> na Primary Assembly 7286249 na SUPER_39_HAP1 assembled-molecule 39 Chromosome OZ506044.1 <> na Primary Assembly 4580164 na SUPER_40_HAP1 assembled-molecule 40 Chromosome OZ506045.1 <> na Primary Assembly 4344276 na SUPER_W_HAP1 assembled-molecule W Chromosome OZ506046.1 <> na Primary Assembly 36309881 na SUPER_Z_HAP1 assembled-molecule Z Chromosome OZ506047.1 <> na Primary Assembly 86054378 na HAP1_SCAFFOLD_43 unplaced-scaffold na na CFXSAN010000001.1 <> na Primary Assembly 8019924 na HAP1_SCAFFOLD_47 unplaced-scaffold na na CFXSAN010000002.1 <> na Primary Assembly 5476151 na HAP1_SCAFFOLD_50 unplaced-scaffold na na CFXSAN010000003.1 <> na Primary Assembly 3196297 na HAP1_SCAFFOLD_51 unplaced-scaffold na na CFXSAN010000004.1 <> na Primary Assembly 2934876 na HAP1_SCAFFOLD_52 unplaced-scaffold na na CFXSAN010000005.1 <> na Primary Assembly 2290149 na HAP1_SCAFFOLD_55 unplaced-scaffold na na CFXSAN010000006.1 <> na Primary Assembly 1436123 na HAP1_SCAFFOLD_56 unplaced-scaffold na na CFXSAN010000007.1 <> na Primary Assembly 1274599 na HAP1_SCAFFOLD_57 unplaced-scaffold na na CFXSAN010000008.1 <> na Primary Assembly 1254656 na HAP1_SCAFFOLD_58 unplaced-scaffold na na CFXSAN010000009.1 <> na Primary Assembly 1239309 na HAP1_SCAFFOLD_60 unplaced-scaffold na na CFXSAN010000010.1 <> na Primary Assembly 1093560 na HAP1_SCAFFOLD_61 unplaced-scaffold na na CFXSAN010000011.1 <> na Primary Assembly 1068251 na HAP1_SCAFFOLD_64 unplaced-scaffold na na CFXSAN010000012.1 <> na Primary Assembly 851060 na HAP1_SCAFFOLD_65 unplaced-scaffold na na CFXSAN010000013.1 <> na Primary Assembly 841934 na HAP1_SCAFFOLD_66 unplaced-scaffold na na CFXSAN010000014.1 <> na Primary Assembly 832843 na HAP1_SCAFFOLD_69 unplaced-scaffold na na CFXSAN010000015.1 <> na Primary Assembly 788388 na HAP1_SCAFFOLD_73 unplaced-scaffold na na CFXSAN010000016.1 <> na Primary Assembly 627631 na HAP1_SCAFFOLD_74 unplaced-scaffold na na CFXSAN010000017.1 <> na Primary Assembly 613966 na HAP1_SCAFFOLD_75 unplaced-scaffold na na CFXSAN010000018.1 <> na Primary Assembly 604919 na HAP1_SCAFFOLD_76 unplaced-scaffold na na CFXSAN010000019.1 <> na Primary Assembly 567875 na HAP1_SCAFFOLD_79 unplaced-scaffold na na CFXSAN010000020.1 <> na Primary Assembly 528827 na HAP1_SCAFFOLD_80 unplaced-scaffold na na CFXSAN010000021.1 <> na Primary Assembly 510858 na HAP1_SCAFFOLD_81 unplaced-scaffold na na CFXSAN010000022.1 <> na Primary Assembly 494659 na HAP1_SCAFFOLD_82 unplaced-scaffold na na CFXSAN010000023.1 <> na Primary Assembly 471032 na HAP1_SCAFFOLD_83 unplaced-scaffold na na CFXSAN010000024.1 <> na Primary Assembly 436019 na HAP1_SCAFFOLD_86 unplaced-scaffold na na CFXSAN010000025.1 <> na Primary Assembly 344767 na HAP1_SCAFFOLD_87 unplaced-scaffold na na CFXSAN010000026.1 <> na Primary Assembly 322368 na HAP1_SCAFFOLD_92 unplaced-scaffold na na CFXSAN010000027.1 <> na Primary Assembly 220648 na HAP1_SCAFFOLD_93 unplaced-scaffold na na CFXSAN010000028.1 <> na Primary Assembly 193826 na HAP1_SCAFFOLD_94 unplaced-scaffold na na CFXSAN010000029.1 <> na Primary Assembly 190986 na HAP1_SCAFFOLD_95 unplaced-scaffold na na CFXSAN010000030.1 <> na Primary Assembly 170969 na HAP1_SCAFFOLD_96 unplaced-scaffold na na CFXSAN010000031.1 <> na Primary Assembly 168440 na HAP1_SCAFFOLD_97 unplaced-scaffold na na CFXSAN010000032.1 <> na Primary Assembly 153449 na HAP1_SCAFFOLD_98 unplaced-scaffold na na CFXSAN010000033.1 <> na Primary Assembly 149528 na HAP1_SCAFFOLD_99 unplaced-scaffold na na CFXSAN010000034.1 <> na Primary Assembly 108234 na HAP1_SCAFFOLD_100 unplaced-scaffold na na CFXSAN010000035.1 <> na Primary Assembly 87506 na HAP1_SCAFFOLD_101 unplaced-scaffold na na CFXSAN010000036.1 <> na Primary Assembly 80140 na HAP1_SCAFFOLD_103 unplaced-scaffold na na CFXSAN010000037.1 <> na Primary Assembly 24937 na HAP1_SCAFFOLD_104 unplaced-scaffold na na CFXSAN010000038.1 <> na Primary Assembly 13993 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ506048.1 <> na non-nuclear 18676 na