# Assembly name: ASM22398v1 # Organism name: Thiocapsa marina 5811 (g-proteobacteria) # Infraspecific name: strain=5811 # Taxid: 768671 # BioSample: SAMN02261407 # BioProject: PRJNA63055 # Submitter: JGI # Date: 2011-08-18 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: AFWV01 # Assembly method: Newbler v. 2.3 # Genome coverage: 30x # Sequencing technology: 454/Illumina # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000223985.2 # RefSeq assembly accession: GCF_000223985.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000223995.2 GCF_000223995.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name ctg475 unplaced-scaffold na na AFWV01000001.1 = NZ_AFWV01000001.1 Primary Assembly 547790 na ctg474 unplaced-scaffold na na AFWV01000002.1 = NZ_AFWV01000002.1 Primary Assembly 467739 na ctg473 unplaced-scaffold na na AFWV01000003.1 = NZ_AFWV01000003.1 Primary Assembly 417433 na ctg472 unplaced-scaffold na na AFWV01000004.1 = NZ_AFWV01000004.1 Primary Assembly 386487 na ctg471 unplaced-scaffold na na AFWV01000005.1 = NZ_AFWV01000005.1 Primary Assembly 361075 na ctg467 unplaced-scaffold na na AFWV01000006.1 = NZ_AFWV01000006.1 Primary Assembly 319905 na ctg470 unplaced-scaffold na na AFWV01000007.1 = NZ_AFWV01000007.1 Primary Assembly 312570 na ctg469 unplaced-scaffold na na AFWV01000008.1 = NZ_AFWV01000008.1 Primary Assembly 307854 na ctg468 unplaced-scaffold na na AFWV01000009.1 = NZ_AFWV01000009.1 Primary Assembly 291944 na ctg466 unplaced-scaffold na na AFWV01000010.1 = NZ_AFWV01000010.1 Primary Assembly 263112 na ctg465 unplaced-scaffold na na AFWV01000011.1 = NZ_AFWV01000011.1 Primary Assembly 257345 na ctg464 unplaced-scaffold na na AFWV01000012.1 = NZ_AFWV01000012.1 Primary Assembly 226073 na ctg463 unplaced-scaffold na na AFWV01000013.1 = NZ_AFWV01000013.1 Primary Assembly 212838 na ctg462 unplaced-scaffold na na AFWV01000014.1 = NZ_AFWV01000014.1 Primary Assembly 155960 na ctg460 unplaced-scaffold na na AFWV01000015.1 = NZ_AFWV01000015.1 Primary Assembly 127159 na ctg461 unplaced-scaffold na na AFWV01000016.1 = NZ_AFWV01000016.1 Primary Assembly 111833 na ctg457 unplaced-scaffold na na AFWV01000017.1 = NZ_AFWV01000017.1 Primary Assembly 95875 na ctg459 unplaced-scaffold na na AFWV01000018.1 = NZ_AFWV01000018.1 Primary Assembly 92763 na ctg458 unplaced-scaffold na na AFWV01000019.1 = NZ_AFWV01000019.1 Primary Assembly 87264 na ctg455 unplaced-scaffold na na AFWV01000020.1 = NZ_AFWV01000020.1 Primary Assembly 87167 na ctg456 unplaced-scaffold na na AFWV01000021.1 = NZ_AFWV01000021.1 Primary Assembly 84416 na ctg454 unplaced-scaffold na na AFWV01000022.1 = NZ_AFWV01000022.1 Primary Assembly 54718 na ctg452 unplaced-scaffold na na AFWV01000023.1 = NZ_AFWV01000023.1 Primary Assembly 34805 na ctg453 unplaced-scaffold na na AFWV01000024.1 = NZ_AFWV01000024.1 Primary Assembly 32331 na ctg451 unplaced-scaffold na na AFWV01000025.1 = NZ_AFWV01000025.1 Primary Assembly 27862 na ctg450 unplaced-scaffold na na AFWV01000026.1 = NZ_AFWV01000026.1 Primary Assembly 24564 na ctg447 unplaced-scaffold na na AFWV01000027.1 = NZ_AFWV01000027.1 Primary Assembly 22090 na ctg444 unplaced-scaffold na na AFWV01000028.1 = NZ_AFWV01000028.1 Primary Assembly 22001 na ctg448 unplaced-scaffold na na AFWV01000029.1 = NZ_AFWV01000029.1 Primary Assembly 20136 na ctg449 unplaced-scaffold na na AFWV01000030.1 = NZ_AFWV01000030.1 Primary Assembly 17639 na ctg446 unplaced-scaffold na na AFWV01000031.1 = NZ_AFWV01000031.1 Primary Assembly 16497 na ctg445 unplaced-scaffold na na AFWV01000032.1 = NZ_AFWV01000032.1 Primary Assembly 15450 na ctg442 unplaced-scaffold na na AFWV01000033.1 = NZ_AFWV01000033.1 Primary Assembly 13524 na ctg443 unplaced-scaffold na na AFWV01000034.1 = NZ_AFWV01000034.1 Primary Assembly 11891 na ctg441 unplaced-scaffold na na AFWV01000035.1 = NZ_AFWV01000035.1 Primary Assembly 11253 na ctg440 unplaced-scaffold na na AFWV01000036.1 = NZ_AFWV01000036.1 Primary Assembly 7199 na ctg439 unplaced-scaffold na na AFWV01000037.1 = NZ_AFWV01000037.1 Primary Assembly 6702 na ctg438 unplaced-scaffold na na AFWV01000038.1 = NZ_AFWV01000038.1 Primary Assembly 6200 na ctg437 unplaced-scaffold na na AFWV01000039.1 = NZ_AFWV01000039.1 Primary Assembly 4522 na ctg436 unplaced-scaffold na na AFWV01000040.1 = NZ_AFWV01000040.1 Primary Assembly 3822 na ctg435 unplaced-scaffold na na AFWV01000041.1 = NZ_AFWV01000041.1 Primary Assembly 3180 na ctg425 unplaced-scaffold na na AFWV01000042.1 = NZ_AFWV01000042.1 Primary Assembly 2501 na ctg433 unplaced-scaffold na na AFWV01000043.1 = NZ_AFWV01000043.1 Primary Assembly 2274 na ctg431 unplaced-scaffold na na AFWV01000044.1 = NZ_AFWV01000044.1 Primary Assembly 2000 na ctg432 unplaced-scaffold na na AFWV01000045.1 = NZ_AFWV01000045.1 Primary Assembly 1779 na ctg301 unplaced-scaffold na na AFWV01000046.1 = NZ_AFWV01000046.1 Primary Assembly 1527 na ctg364 unplaced-scaffold na na AFWV01000047.1 = NZ_AFWV01000047.1 Primary Assembly 1500 na ctg434 unplaced-scaffold na na AFWV01000048.1 = NZ_AFWV01000048.1 Primary Assembly 1415 na ctg430 unplaced-scaffold na na AFWV01000049.1 = NZ_AFWV01000049.1 Primary Assembly 1339 na ctg427 unplaced-scaffold na na AFWV01000050.1 = NZ_AFWV01000050.1 Primary Assembly 1198 na ctg428 unplaced-scaffold na na AFWV01000051.1 = NZ_AFWV01000051.1 Primary Assembly 1111 na ctg429 unplaced-scaffold na na AFWV01000052.1 = NZ_AFWV01000052.1 Primary Assembly 1004 na ctg426 unplaced-scaffold na na AFWV01000053.1 = NZ_AFWV01000053.1 Primary Assembly 949 na ctg126 unplaced-scaffold na na AFWV01000054.1 = NZ_AFWV01000054.1 Primary Assembly 891 na ctg189 unplaced-scaffold na na AFWV01000055.1 = NZ_AFWV01000055.1 Primary Assembly 841 na ctg391 unplaced-scaffold na na AFWV01000056.1 = NZ_AFWV01000056.1 Primary Assembly 708 na ctg407 unplaced-scaffold na na AFWV01000057.1 = NZ_AFWV01000057.1 Primary Assembly 646 na ctg61 unplaced-scaffold na na AFWV01000058.1 = NZ_AFWV01000058.1 Primary Assembly 602 na ctg409 unplaced-scaffold na na AFWV01000059.1 = NZ_AFWV01000059.1 Primary Assembly 589 na ctg405 unplaced-scaffold na na AFWV01000060.1 = NZ_AFWV01000060.1 Primary Assembly 582 na ctg387 unplaced-scaffold na na AFWV01000061.1 = NZ_AFWV01000061.1 Primary Assembly 567 na ctg352 unplaced-scaffold na na AFWV01000062.1 = NZ_AFWV01000062.1 Primary Assembly 529 na