# Assembly name: ASM33489v1 # Organism name: Halococcus agarilyticus (euryarchaeotes) # Infraspecific name: strain=197A # Taxid: 1232219 # BioSample: SAMD00011631 # BioProject: PRJDB105 # Submitter: Japan Agency for Marine-Earth Science and Technology # Date: 2013-01-29 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: BAFM01 # Assembly method: GS De Novo Assembler v. 2.3 # Genome coverage: 20x # Sequencing technology: 454 GS FLX Titanium # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000334895.1 # RefSeq assembly accession: GCF_000334895.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000334905.1 GCF_000334905.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name BAFM01000001.1 unplaced-scaffold na na BAFM01000001.1 = NZ_BAFM01000001.1 Primary Assembly 320600 na BAFM01000002.1 unplaced-scaffold na na BAFM01000002.1 = NZ_BAFM01000002.1 Primary Assembly 289782 na BAFM01000003.1 unplaced-scaffold na na BAFM01000003.1 = NZ_BAFM01000003.1 Primary Assembly 238120 na BAFM01000004.1 unplaced-scaffold na na BAFM01000004.1 = NZ_BAFM01000004.1 Primary Assembly 207873 na BAFM01000005.1 unplaced-scaffold na na BAFM01000005.1 = NZ_BAFM01000005.1 Primary Assembly 178824 na BAFM01000006.1 unplaced-scaffold na na BAFM01000006.1 = NZ_BAFM01000006.1 Primary Assembly 175349 na BAFM01000007.1 unplaced-scaffold na na BAFM01000007.1 = NZ_BAFM01000007.1 Primary Assembly 165169 na BAFM01000008.1 unplaced-scaffold na na BAFM01000008.1 = NZ_BAFM01000008.1 Primary Assembly 157917 na BAFM01000009.1 unplaced-scaffold na na BAFM01000009.1 = NZ_BAFM01000009.1 Primary Assembly 147353 na BAFM01000010.1 unplaced-scaffold na na BAFM01000010.1 = NZ_BAFM01000010.1 Primary Assembly 146612 na BAFM01000011.1 unplaced-scaffold na na BAFM01000011.1 = NZ_BAFM01000011.1 Primary Assembly 133282 na BAFM01000012.1 unplaced-scaffold na na BAFM01000012.1 = NZ_BAFM01000012.1 Primary Assembly 128953 na BAFM01000013.1 unplaced-scaffold na na BAFM01000013.1 = NZ_BAFM01000013.1 Primary Assembly 128312 na BAFM01000014.1 unplaced-scaffold na na BAFM01000014.1 = NZ_BAFM01000014.1 Primary Assembly 111415 na BAFM01000015.1 unplaced-scaffold na na BAFM01000015.1 = NZ_BAFM01000015.1 Primary Assembly 100585 na BAFM01000016.1 unplaced-scaffold na na BAFM01000016.1 = NZ_BAFM01000016.1 Primary Assembly 79075 na BAFM01000017.1 unplaced-scaffold na na BAFM01000017.1 = NZ_BAFM01000017.1 Primary Assembly 69435 na BAFM01000018.1 unplaced-scaffold na na BAFM01000018.1 = NZ_BAFM01000018.1 Primary Assembly 66714 na BAFM01000019.1 unplaced-scaffold na na BAFM01000019.1 = NZ_BAFM01000019.1 Primary Assembly 56912 na BAFM01000020.1 unplaced-scaffold na na BAFM01000020.1 = NZ_BAFM01000020.1 Primary Assembly 51001 na BAFM01000021.1 unplaced-scaffold na na BAFM01000021.1 = NZ_BAFM01000021.1 Primary Assembly 47230 na BAFM01000022.1 unplaced-scaffold na na BAFM01000022.1 = NZ_BAFM01000022.1 Primary Assembly 43345 na BAFM01000023.1 unplaced-scaffold na na BAFM01000023.1 = NZ_BAFM01000023.1 Primary Assembly 42948 na BAFM01000024.1 unplaced-scaffold na na BAFM01000024.1 = NZ_BAFM01000024.1 Primary Assembly 40786 na BAFM01000025.1 unplaced-scaffold na na BAFM01000025.1 = NZ_BAFM01000025.1 Primary Assembly 37103 na BAFM01000026.1 unplaced-scaffold na na BAFM01000026.1 = NZ_BAFM01000026.1 Primary Assembly 35934 na BAFM01000027.1 unplaced-scaffold na na BAFM01000027.1 = NZ_BAFM01000027.1 Primary Assembly 33738 na BAFM01000028.1 unplaced-scaffold na na BAFM01000028.1 = NZ_BAFM01000028.1 Primary Assembly 31030 na BAFM01000029.1 unplaced-scaffold na na BAFM01000029.1 = NZ_BAFM01000029.1 Primary Assembly 28354 na BAFM01000030.1 unplaced-scaffold na na BAFM01000030.1 = NZ_BAFM01000030.1 Primary Assembly 28054 na BAFM01000031.1 unplaced-scaffold na na BAFM01000031.1 = NZ_BAFM01000031.1 Primary Assembly 26391 na BAFM01000032.1 unplaced-scaffold na na BAFM01000032.1 = NZ_BAFM01000032.1 Primary Assembly 21058 na BAFM01000033.1 unplaced-scaffold na na BAFM01000033.1 = NZ_BAFM01000033.1 Primary Assembly 17927 na BAFM01000034.1 unplaced-scaffold na na BAFM01000034.1 = NZ_BAFM01000034.1 Primary Assembly 17652 na BAFM01000035.1 unplaced-scaffold na na BAFM01000035.1 = NZ_BAFM01000035.1 Primary Assembly 16688 na BAFM01000036.1 unplaced-scaffold na na BAFM01000036.1 = NZ_BAFM01000036.1 Primary Assembly 15324 na BAFM01000037.1 unplaced-scaffold na na BAFM01000037.1 = NZ_BAFM01000037.1 Primary Assembly 10459 na BAFM01000038.1 unplaced-scaffold na na BAFM01000038.1 = NZ_BAFM01000038.1 Primary Assembly 8946 na BAFM01000039.1 unplaced-scaffold na na BAFM01000039.1 = NZ_BAFM01000039.1 Primary Assembly 6748 na BAFM01000040.1 unplaced-scaffold na na BAFM01000040.1 = NZ_BAFM01000040.1 Primary Assembly 3193 na BAFM01000041.1 unplaced-scaffold na na BAFM01000041.1 = NZ_BAFM01000041.1 Primary Assembly 2153 na BAFM01000042.1 unplaced-scaffold na na BAFM01000042.1 = NZ_BAFM01000042.1 Primary Assembly 2001 na BAFM01000043.1 unplaced-scaffold na na BAFM01000043.1 = NZ_BAFM01000043.1 Primary Assembly 810 na BAFM01000044.1 unplaced-scaffold na na BAFM01000044.1 = NZ_BAFM01000044.1 Primary Assembly 809 na BAFM01000045.1 unplaced-scaffold na na BAFM01000045.1 = NZ_BAFM01000045.1 Primary Assembly 618 na BAFM01000046.1 unplaced-scaffold na na BAFM01000046.1 = NZ_BAFM01000046.1 Primary Assembly 541 na BAFM01000047.1 unplaced-scaffold na na BAFM01000047.1 = NZ_BAFM01000047.1 Primary Assembly 535 na BAFM01000048.1 unplaced-scaffold na na BAFM01000048.1 = NZ_BAFM01000048.1 Primary Assembly 523 na BAFM01000049.1 unplaced-scaffold na na BAFM01000049.1 = NZ_BAFM01000049.1 Primary Assembly 506 na BAFM01000050.1 unplaced-scaffold na na BAFM01000050.1 = NZ_BAFM01000050.1 Primary Assembly 424 na BAFM01000051.1 unplaced-scaffold na na BAFM01000051.1 = NZ_BAFM01000051.1 Primary Assembly 359 na BAFM01000052.1 unplaced-scaffold na na BAFM01000052.1 = NZ_BAFM01000052.1 Primary Assembly 231 na BAFM01000053.1 unplaced-scaffold na na BAFM01000053.1 = NZ_BAFM01000053.1 Primary Assembly 224 na BAFM01000054.1 unplaced-scaffold na na BAFM01000054.1 = NZ_BAFM01000054.1 Primary Assembly 199 na BAFM01000055.1 unplaced-scaffold na na BAFM01000055.1 = NZ_BAFM01000055.1 Primary Assembly 167 na BAFM01000056.1 unplaced-scaffold na na BAFM01000056.1 = NZ_BAFM01000056.1 Primary Assembly 162 na BAFM01000057.1 unplaced-scaffold na na BAFM01000057.1 = NZ_BAFM01000057.1 Primary Assembly 156 na BAFM01000058.1 unplaced-scaffold na na BAFM01000058.1 = NZ_BAFM01000058.1 Primary Assembly 119 na