# Assembly name: ASM33669v1 # Organism name: Halococcus morrhuae DSM 1307 (euryarchaeotes) # Infraspecific name: strain=DSM 1307 # Taxid: 931277 # BioSample: SAMN02471675 # BioProject: PRJNA174897 # Submitter: University of California, Davis # Date: 2013-02-04 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: AOMC01 # Assembly method: A5 v. Nov-2011 # Genome coverage: 200x # Sequencing technology: Illumina GAIIX; HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000336695.1 # RefSeq assembly accession: GCF_000336695.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000336705.1 GCF_000336705.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_1 unplaced-scaffold na na AOMC01000001.1 = NZ_AOMC01000001.1 Primary Assembly 404 na contig_2 unplaced-scaffold na na AOMC01000002.1 = NZ_AOMC01000002.1 Primary Assembly 13613 na contig_3 unplaced-scaffold na na AOMC01000003.1 = NZ_AOMC01000003.1 Primary Assembly 11573 na contig_4 unplaced-scaffold na na AOMC01000004.1 = NZ_AOMC01000004.1 Primary Assembly 269 na contig_5 unplaced-scaffold na na AOMC01000005.1 = NZ_AOMC01000005.1 Primary Assembly 4783 na contig_6 unplaced-scaffold na na AOMC01000006.1 = NZ_AOMC01000006.1 Primary Assembly 11525 na contig_7 unplaced-scaffold na na AOMC01000007.1 = NZ_AOMC01000007.1 Primary Assembly 2461 na contig_8 unplaced-scaffold na na AOMC01000008.1 = NZ_AOMC01000008.1 Primary Assembly 17321 na contig_9 unplaced-scaffold na na AOMC01000009.1 = NZ_AOMC01000009.1 Primary Assembly 14412 na contig_10 unplaced-scaffold na na AOMC01000010.1 = NZ_AOMC01000010.1 Primary Assembly 561 na contig_11 unplaced-scaffold na na AOMC01000011.1 = NZ_AOMC01000011.1 Primary Assembly 221 na contig_12 unplaced-scaffold na na AOMC01000012.1 = NZ_AOMC01000012.1 Primary Assembly 2216 na contig_13 unplaced-scaffold na na AOMC01000013.1 = NZ_AOMC01000013.1 Primary Assembly 221 na contig_14 unplaced-scaffold na na AOMC01000014.1 = NZ_AOMC01000014.1 Primary Assembly 54746 na contig_15 unplaced-scaffold na na AOMC01000015.1 = NZ_AOMC01000015.1 Primary Assembly 81171 na contig_16 unplaced-scaffold na na AOMC01000016.1 = NZ_AOMC01000016.1 Primary Assembly 1947 na contig_17 unplaced-scaffold na na AOMC01000017.1 = NZ_AOMC01000017.1 Primary Assembly 804 na contig_18 unplaced-scaffold na na AOMC01000018.1 = NZ_AOMC01000018.1 Primary Assembly 1110 na contig_19 unplaced-scaffold na na AOMC01000019.1 = NZ_AOMC01000019.1 Primary Assembly 1729 na contig_20 unplaced-scaffold na na AOMC01000020.1 = NZ_AOMC01000020.1 Primary Assembly 770 na contig_21 unplaced-scaffold na na AOMC01000021.1 = NZ_AOMC01000021.1 Primary Assembly 5426 na contig_22 unplaced-scaffold na na AOMC01000022.1 = NZ_AOMC01000022.1 Primary Assembly 4267 na contig_23 unplaced-scaffold na na AOMC01000023.1 = NZ_AOMC01000023.1 Primary Assembly 7551 na contig_24 unplaced-scaffold na na AOMC01000024.1 = NZ_AOMC01000024.1 Primary Assembly 28098 na contig_25 unplaced-scaffold na na AOMC01000025.1 = NZ_AOMC01000025.1 Primary Assembly 8684 na contig_26 unplaced-scaffold na na AOMC01000026.1 = NZ_AOMC01000026.1 Primary Assembly 7057 na contig_27 unplaced-scaffold na na AOMC01000027.1 = NZ_AOMC01000027.1 Primary Assembly 291 na contig_28 unplaced-scaffold na na AOMC01000028.1 = NZ_AOMC01000028.1 Primary Assembly 1133 na contig_29 unplaced-scaffold na na AOMC01000029.1 = NZ_AOMC01000029.1 Primary Assembly 992 na contig_30 unplaced-scaffold na na AOMC01000030.1 = NZ_AOMC01000030.1 Primary Assembly 1545 na contig_31 unplaced-scaffold na na AOMC01000031.1 = NZ_AOMC01000031.1 Primary Assembly 1113 na contig_32 unplaced-scaffold na na AOMC01000032.1 = NZ_AOMC01000032.1 Primary Assembly 2864 na contig_33 unplaced-scaffold na na AOMC01000033.1 = NZ_AOMC01000033.1 Primary Assembly 52224 na contig_34 unplaced-scaffold na na AOMC01000034.1 = NZ_AOMC01000034.1 Primary Assembly 13784 na contig_35 unplaced-scaffold na na AOMC01000035.1 = NZ_AOMC01000035.1 Primary Assembly 2482 na contig_36 unplaced-scaffold na na AOMC01000036.1 = NZ_AOMC01000036.1 Primary Assembly 8418 na contig_37 unplaced-scaffold na na AOMC01000037.1 = NZ_AOMC01000037.1 Primary Assembly 289 na contig_38 unplaced-scaffold na na AOMC01000038.1 = NZ_AOMC01000038.1 Primary Assembly 2297 na contig_39 unplaced-scaffold na na AOMC01000039.1 = NZ_AOMC01000039.1 Primary Assembly 1817 na contig_40 unplaced-scaffold na na AOMC01000040.1 = NZ_AOMC01000040.1 Primary Assembly 39568 na contig_41 unplaced-scaffold na na AOMC01000041.1 = NZ_AOMC01000041.1 Primary Assembly 494 na contig_42 unplaced-scaffold na na AOMC01000042.1 = NZ_AOMC01000042.1 Primary Assembly 224 na contig_43 unplaced-scaffold na na AOMC01000043.1 = NZ_AOMC01000043.1 Primary Assembly 58444 na contig_44 unplaced-scaffold na na AOMC01000044.1 = NZ_AOMC01000044.1 Primary Assembly 272 na contig_45 unplaced-scaffold na na AOMC01000045.1 = NZ_AOMC01000045.1 Primary Assembly 209 na contig_46 unplaced-scaffold na na AOMC01000046.1 = NZ_AOMC01000046.1 Primary Assembly 112091 na contig_47 unplaced-scaffold na na AOMC01000047.1 = NZ_AOMC01000047.1 Primary Assembly 2884 na contig_48 unplaced-scaffold na na AOMC01000048.1 = NZ_AOMC01000048.1 Primary Assembly 1361 na contig_49 unplaced-scaffold na na AOMC01000049.1 = NZ_AOMC01000049.1 Primary Assembly 1276 na contig_50 unplaced-scaffold na na AOMC01000050.1 = NZ_AOMC01000050.1 Primary Assembly 302 na contig_51 unplaced-scaffold na na AOMC01000051.1 = NZ_AOMC01000051.1 Primary Assembly 8784 na contig_52 unplaced-scaffold na na AOMC01000052.1 = NZ_AOMC01000052.1 Primary Assembly 1602 na contig_53 unplaced-scaffold na na AOMC01000053.1 = NZ_AOMC01000053.1 Primary Assembly 834 na contig_54 unplaced-scaffold na na AOMC01000054.1 = NZ_AOMC01000054.1 Primary Assembly 138057 na contig_55 unplaced-scaffold na na AOMC01000055.1 = NZ_AOMC01000055.1 Primary Assembly 1174 na contig_56 unplaced-scaffold na na AOMC01000056.1 = NZ_AOMC01000056.1 Primary Assembly 3960 na contig_57 unplaced-scaffold na na AOMC01000057.1 = NZ_AOMC01000057.1 Primary Assembly 239 na contig_58 unplaced-scaffold na na AOMC01000058.1 = NZ_AOMC01000058.1 Primary Assembly 230 na contig_59 unplaced-scaffold na na AOMC01000059.1 = NZ_AOMC01000059.1 Primary Assembly 252 na contig_60 unplaced-scaffold na na AOMC01000060.1 = NZ_AOMC01000060.1 Primary Assembly 4796 na contig_61 unplaced-scaffold na na AOMC01000061.1 = NZ_AOMC01000061.1 Primary Assembly 4356 na contig_62 unplaced-scaffold na na AOMC01000062.1 = NZ_AOMC01000062.1 Primary Assembly 1905 na contig_63 unplaced-scaffold na na AOMC01000063.1 = NZ_AOMC01000063.1 Primary Assembly 36771 na contig_64 unplaced-scaffold na na AOMC01000064.1 = NZ_AOMC01000064.1 Primary Assembly 573 na contig_65 unplaced-scaffold na na AOMC01000065.1 = NZ_AOMC01000065.1 Primary Assembly 1001 na contig_66 unplaced-scaffold na na AOMC01000066.1 = NZ_AOMC01000066.1 Primary Assembly 1883 na contig_67 unplaced-scaffold na na AOMC01000067.1 = NZ_AOMC01000067.1 Primary Assembly 3150 na contig_68 unplaced-scaffold na na AOMC01000068.1 = NZ_AOMC01000068.1 Primary Assembly 6196 na contig_69 unplaced-scaffold na na AOMC01000069.1 = NZ_AOMC01000069.1 Primary Assembly 3260 na contig_70 unplaced-scaffold na na AOMC01000070.1 = NZ_AOMC01000070.1 Primary Assembly 99045 na contig_71 unplaced-scaffold na na AOMC01000071.1 = NZ_AOMC01000071.1 Primary Assembly 19756 na contig_72 unplaced-scaffold na na AOMC01000072.1 = NZ_AOMC01000072.1 Primary Assembly 2767 na contig_73 unplaced-scaffold na na AOMC01000073.1 = NZ_AOMC01000073.1 Primary Assembly 640 na contig_74 unplaced-scaffold na na AOMC01000074.1 = NZ_AOMC01000074.1 Primary Assembly 87049 na contig_75 unplaced-scaffold na na AOMC01000075.1 = NZ_AOMC01000075.1 Primary Assembly 4171 na contig_76 unplaced-scaffold na na AOMC01000076.1 = NZ_AOMC01000076.1 Primary Assembly 1865 na contig_77 unplaced-scaffold na na AOMC01000077.1 = NZ_AOMC01000077.1 Primary Assembly 1038 na contig_78 unplaced-scaffold na na AOMC01000078.1 = NZ_AOMC01000078.1 Primary Assembly 265 na contig_79 unplaced-scaffold na na AOMC01000079.1 = NZ_AOMC01000079.1 Primary Assembly 30468 na contig_80 unplaced-scaffold na na AOMC01000080.1 = NZ_AOMC01000080.1 Primary Assembly 2775 na contig_81 unplaced-scaffold na na AOMC01000081.1 = NZ_AOMC01000081.1 Primary Assembly 1919 na contig_82 unplaced-scaffold na na AOMC01000082.1 = NZ_AOMC01000082.1 Primary Assembly 634 na contig_83 unplaced-scaffold na na AOMC01000083.1 = NZ_AOMC01000083.1 Primary Assembly 5325 na contig_84 unplaced-scaffold na na AOMC01000084.1 = NZ_AOMC01000084.1 Primary Assembly 2722 na contig_85 unplaced-scaffold na na AOMC01000085.1 = NZ_AOMC01000085.1 Primary Assembly 42818 na contig_86 unplaced-scaffold na na AOMC01000086.1 = NZ_AOMC01000086.1 Primary Assembly 4664 na contig_87 unplaced-scaffold na na AOMC01000087.1 = NZ_AOMC01000087.1 Primary Assembly 37630 na contig_88 unplaced-scaffold na na AOMC01000088.1 = NZ_AOMC01000088.1 Primary Assembly 220 na contig_89 unplaced-scaffold na na AOMC01000089.1 = NZ_AOMC01000089.1 Primary Assembly 211 na contig_90 unplaced-scaffold na na AOMC01000090.1 = NZ_AOMC01000090.1 Primary Assembly 517 na contig_91 unplaced-scaffold na na AOMC01000091.1 = NZ_AOMC01000091.1 Primary Assembly 120652 na contig_92 unplaced-scaffold na na AOMC01000092.1 = NZ_AOMC01000092.1 Primary Assembly 2266 na contig_93 unplaced-scaffold na na AOMC01000093.1 = NZ_AOMC01000093.1 Primary Assembly 51072 na contig_94 unplaced-scaffold na na AOMC01000094.1 = NZ_AOMC01000094.1 Primary Assembly 23655 na contig_95 unplaced-scaffold na na AOMC01000095.1 = NZ_AOMC01000095.1 Primary Assembly 5440 na contig_96 unplaced-scaffold na na AOMC01000096.1 = NZ_AOMC01000096.1 Primary Assembly 116859 na contig_97 unplaced-scaffold na na AOMC01000097.1 = NZ_AOMC01000097.1 Primary Assembly 1344 na contig_98 unplaced-scaffold na na AOMC01000098.1 = NZ_AOMC01000098.1 Primary Assembly 758 na contig_99 unplaced-scaffold na na AOMC01000099.1 = NZ_AOMC01000099.1 Primary Assembly 496 na contig_100 unplaced-scaffold na na AOMC01000100.1 = NZ_AOMC01000100.1 Primary Assembly 28671 na contig_101 unplaced-scaffold na na AOMC01000101.1 = NZ_AOMC01000101.1 Primary Assembly 19800 na contig_102 unplaced-scaffold na na AOMC01000102.1 = NZ_AOMC01000102.1 Primary Assembly 284 na contig_103 unplaced-scaffold na na AOMC01000103.1 = NZ_AOMC01000103.1 Primary Assembly 2834 na contig_104 unplaced-scaffold na na AOMC01000104.1 = NZ_AOMC01000104.1 Primary Assembly 1856 na contig_105 unplaced-scaffold na na AOMC01000105.1 = NZ_AOMC01000105.1 Primary Assembly 15036 na contig_106 unplaced-scaffold na na AOMC01000106.1 = NZ_AOMC01000106.1 Primary Assembly 30613 na contig_107 unplaced-scaffold na na AOMC01000107.1 = NZ_AOMC01000107.1 Primary Assembly 70502 na contig_108 unplaced-scaffold na na AOMC01000108.1 = NZ_AOMC01000108.1 Primary Assembly 1651 na contig_109 unplaced-scaffold na na AOMC01000109.1 = NZ_AOMC01000109.1 Primary Assembly 112650 na contig_110 unplaced-scaffold na na AOMC01000110.1 = NZ_AOMC01000110.1 Primary Assembly 917 na contig_111 unplaced-scaffold na na AOMC01000111.1 = NZ_AOMC01000111.1 Primary Assembly 13873 na contig_112 unplaced-scaffold na na AOMC01000112.1 = NZ_AOMC01000112.1 Primary Assembly 33776 na contig_113 unplaced-scaffold na na AOMC01000113.1 = NZ_AOMC01000113.1 Primary Assembly 34847 na contig_114 unplaced-scaffold na na AOMC01000114.1 = NZ_AOMC01000114.1 Primary Assembly 1782 na contig_115 unplaced-scaffold na na AOMC01000115.1 = NZ_AOMC01000115.1 Primary Assembly 2285 na contig_116 unplaced-scaffold na na AOMC01000116.1 = NZ_AOMC01000116.1 Primary Assembly 6391 na contig_117 unplaced-scaffold na na AOMC01000117.1 = NZ_AOMC01000117.1 Primary Assembly 700 na contig_118 unplaced-scaffold na na AOMC01000118.1 = NZ_AOMC01000118.1 Primary Assembly 1530 na contig_119 unplaced-scaffold na na AOMC01000119.1 = NZ_AOMC01000119.1 Primary Assembly 17940 na contig_120 unplaced-scaffold na na AOMC01000120.1 = NZ_AOMC01000120.1 Primary Assembly 38891 na contig_121 unplaced-scaffold na na AOMC01000121.1 = NZ_AOMC01000121.1 Primary Assembly 3132 na contig_122 unplaced-scaffold na na AOMC01000122.1 = NZ_AOMC01000122.1 Primary Assembly 11153 na contig_123 unplaced-scaffold na na AOMC01000123.1 = NZ_AOMC01000123.1 Primary Assembly 47580 na contig_124 unplaced-scaffold na na AOMC01000124.1 = NZ_AOMC01000124.1 Primary Assembly 50582 na contig_125 unplaced-scaffold na na AOMC01000125.1 = NZ_AOMC01000125.1 Primary Assembly 13245 na contig_126 unplaced-scaffold na na AOMC01000126.1 = NZ_AOMC01000126.1 Primary Assembly 4195 na contig_127 unplaced-scaffold na na AOMC01000127.1 = NZ_AOMC01000127.1 Primary Assembly 12220 na contig_128 unplaced-scaffold na na AOMC01000128.1 = NZ_AOMC01000128.1 Primary Assembly 4307 na contig_129 unplaced-scaffold na na AOMC01000129.1 = NZ_AOMC01000129.1 Primary Assembly 1825 na contig_130 unplaced-scaffold na na AOMC01000130.1 = NZ_AOMC01000130.1 Primary Assembly 1956 na contig_131 unplaced-scaffold na na AOMC01000131.1 = NZ_AOMC01000131.1 Primary Assembly 29823 na contig_132 unplaced-scaffold na na AOMC01000132.1 = NZ_AOMC01000132.1 Primary Assembly 23332 na contig_133 unplaced-scaffold na na AOMC01000133.1 = NZ_AOMC01000133.1 Primary Assembly 2563 na contig_134 unplaced-scaffold na na AOMC01000134.1 = NZ_AOMC01000134.1 Primary Assembly 48257 na contig_135 unplaced-scaffold na na AOMC01000135.1 = NZ_AOMC01000135.1 Primary Assembly 108543 na contig_136 unplaced-scaffold na na AOMC01000136.1 = NZ_AOMC01000136.1 Primary Assembly 4894 na contig_137 unplaced-scaffold na na AOMC01000137.1 = NZ_AOMC01000137.1 Primary Assembly 602 na contig_138 unplaced-scaffold na na AOMC01000138.1 = NZ_AOMC01000138.1 Primary Assembly 1816 na contig_139 unplaced-scaffold na na AOMC01000139.1 = NZ_AOMC01000139.1 Primary Assembly 345 na contig_140 unplaced-scaffold na na AOMC01000140.1 = NZ_AOMC01000140.1 Primary Assembly 13423 na contig_141 unplaced-scaffold na na AOMC01000141.1 = NZ_AOMC01000141.1 Primary Assembly 1274 na contig_142 unplaced-scaffold na na AOMC01000142.1 = NZ_AOMC01000142.1 Primary Assembly 77901 na contig_143 unplaced-scaffold na na AOMC01000143.1 = NZ_AOMC01000143.1 Primary Assembly 13903 na contig_144 unplaced-scaffold na na AOMC01000144.1 = NZ_AOMC01000144.1 Primary Assembly 587 na contig_145 unplaced-scaffold na na AOMC01000145.1 = NZ_AOMC01000145.1 Primary Assembly 8507 na contig_146 unplaced-scaffold na na AOMC01000146.1 = NZ_AOMC01000146.1 Primary Assembly 4397 na contig_147 unplaced-scaffold na na AOMC01000147.1 = NZ_AOMC01000147.1 Primary Assembly 1104 na contig_148 unplaced-scaffold na na AOMC01000148.1 = NZ_AOMC01000148.1 Primary Assembly 81837 na contig_149 unplaced-scaffold na na AOMC01000149.1 = NZ_AOMC01000149.1 Primary Assembly 1015 na contig_150 unplaced-scaffold na na AOMC01000150.1 = NZ_AOMC01000150.1 Primary Assembly 1943 na contig_151 unplaced-scaffold na na AOMC01000151.1 = NZ_AOMC01000151.1 Primary Assembly 2006 na contig_152 unplaced-scaffold na na AOMC01000152.1 = NZ_AOMC01000152.1 Primary Assembly 200468 na contig_153 unplaced-scaffold na na AOMC01000153.1 = NZ_AOMC01000153.1 Primary Assembly 1081 na contig_154 unplaced-scaffold na na AOMC01000154.1 = NZ_AOMC01000154.1 Primary Assembly 45077 na contig_155 unplaced-scaffold na na AOMC01000155.1 = NZ_AOMC01000155.1 Primary Assembly 6928 na contig_156 unplaced-scaffold na na AOMC01000156.1 = NZ_AOMC01000156.1 Primary Assembly 14178 na contig_157 unplaced-scaffold na na AOMC01000157.1 = NZ_AOMC01000157.1 Primary Assembly 6404 na contig_158 unplaced-scaffold na na AOMC01000158.1 = NZ_AOMC01000158.1 Primary Assembly 25704 na contig_159 unplaced-scaffold na na AOMC01000159.1 = NZ_AOMC01000159.1 Primary Assembly 775 na contig_160 unplaced-scaffold na na AOMC01000160.1 = NZ_AOMC01000160.1 Primary Assembly 25336 na contig_161 unplaced-scaffold na na AOMC01000161.1 = NZ_AOMC01000161.1 Primary Assembly 127948 na contig_162 unplaced-scaffold na na AOMC01000162.1 = NZ_AOMC01000162.1 Primary Assembly 1470 na contig_163 unplaced-scaffold na na AOMC01000163.1 = NZ_AOMC01000163.1 Primary Assembly 468 na contig_164 unplaced-scaffold na na AOMC01000164.1 = NZ_AOMC01000164.1 Primary Assembly 230 na contig_165 unplaced-scaffold na na AOMC01000165.1 = NZ_AOMC01000165.1 Primary Assembly 771 na contig_166 unplaced-scaffold na na AOMC01000166.1 = NZ_AOMC01000166.1 Primary Assembly 40279 na contig_167 unplaced-scaffold na na AOMC01000167.1 = NZ_AOMC01000167.1 Primary Assembly 1965 na