# Assembly name: ASM33687v1 # Organism name: Halorubrum californiense DSM 19288 (euryarchaeotes) # Infraspecific name: strain=DSM 19288 # Taxid: 1227465 # BioSample: SAMN02471648 # BioProject: PRJNA174912 # Submitter: University of California, Davis # Date: 2013-02-04 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: AOJK01 # Assembly method: A5 v. Nov-2011 # Genome coverage: 200x # Sequencing technology: Illumina GAIIX; HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000336875.1 # RefSeq assembly accession: GCF_000336875.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000336885.1 GCF_000336885.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_1 unplaced-scaffold na na AOJK01000001.1 = NZ_AOJK01000001.1 Primary Assembly 20016 na contig_2 unplaced-scaffold na na AOJK01000002.1 = NZ_AOJK01000002.1 Primary Assembly 18308 na contig_3 unplaced-scaffold na na AOJK01000003.1 = NZ_AOJK01000003.1 Primary Assembly 40024 na contig_4 unplaced-scaffold na na AOJK01000004.1 = NZ_AOJK01000004.1 Primary Assembly 3520 na contig_5 unplaced-scaffold na na AOJK01000005.1 = NZ_AOJK01000005.1 Primary Assembly 5595 na contig_6 unplaced-scaffold na na AOJK01000006.1 = NZ_AOJK01000006.1 Primary Assembly 306 na contig_7 unplaced-scaffold na na AOJK01000007.1 = NZ_AOJK01000007.1 Primary Assembly 975 na contig_8 unplaced-scaffold na na AOJK01000008.1 = NZ_AOJK01000008.1 Primary Assembly 133692 na contig_9 unplaced-scaffold na na AOJK01000009.1 = NZ_AOJK01000009.1 Primary Assembly 130950 na contig_10 unplaced-scaffold na na AOJK01000010.1 = NZ_AOJK01000010.1 Primary Assembly 66832 na contig_11 unplaced-scaffold na na AOJK01000011.1 = NZ_AOJK01000011.1 Primary Assembly 51771 na contig_12 unplaced-scaffold na na AOJK01000012.1 = NZ_AOJK01000012.1 Primary Assembly 55709 na contig_13 unplaced-scaffold na na AOJK01000013.1 = NZ_AOJK01000013.1 Primary Assembly 2412 na contig_14 unplaced-scaffold na na AOJK01000014.1 = NZ_AOJK01000014.1 Primary Assembly 65137 na contig_15 unplaced-scaffold na na AOJK01000015.1 = NZ_AOJK01000015.1 Primary Assembly 56495 na contig_16 unplaced-scaffold na na AOJK01000016.1 = NZ_AOJK01000016.1 Primary Assembly 18851 na contig_17 unplaced-scaffold na na AOJK01000017.1 = NZ_AOJK01000017.1 Primary Assembly 61159 na contig_18 unplaced-scaffold na na AOJK01000018.1 = NZ_AOJK01000018.1 Primary Assembly 13911 na contig_19 unplaced-scaffold na na AOJK01000019.1 = NZ_AOJK01000019.1 Primary Assembly 52968 na contig_20 unplaced-scaffold na na AOJK01000020.1 = NZ_AOJK01000020.1 Primary Assembly 45387 na contig_21 unplaced-scaffold na na AOJK01000021.1 = NZ_AOJK01000021.1 Primary Assembly 101557 na contig_22 unplaced-scaffold na na AOJK01000022.1 = NZ_AOJK01000022.1 Primary Assembly 10114 na contig_23 unplaced-scaffold na na AOJK01000023.1 = NZ_AOJK01000023.1 Primary Assembly 18776 na contig_24 unplaced-scaffold na na AOJK01000024.1 = NZ_AOJK01000024.1 Primary Assembly 62479 na contig_25 unplaced-scaffold na na AOJK01000025.1 = NZ_AOJK01000025.1 Primary Assembly 204548 na contig_26 unplaced-scaffold na na AOJK01000026.1 = NZ_AOJK01000026.1 Primary Assembly 28920 na contig_27 unplaced-scaffold na na AOJK01000027.1 = NZ_AOJK01000027.1 Primary Assembly 18543 na contig_28 unplaced-scaffold na na AOJK01000028.1 = NZ_AOJK01000028.1 Primary Assembly 565 na contig_29 unplaced-scaffold na na AOJK01000029.1 = NZ_AOJK01000029.1 Primary Assembly 1557 na contig_30 unplaced-scaffold na na AOJK01000030.1 = NZ_AOJK01000030.1 Primary Assembly 13233 na contig_31 unplaced-scaffold na na AOJK01000031.1 = NZ_AOJK01000031.1 Primary Assembly 6722 na contig_32 unplaced-scaffold na na AOJK01000032.1 = NZ_AOJK01000032.1 Primary Assembly 6490 na contig_33 unplaced-scaffold na na AOJK01000033.1 = NZ_AOJK01000033.1 Primary Assembly 55354 na contig_34 unplaced-scaffold na na AOJK01000034.1 = NZ_AOJK01000034.1 Primary Assembly 1025 na contig_35 unplaced-scaffold na na AOJK01000035.1 = NZ_AOJK01000035.1 Primary Assembly 20681 na contig_36 unplaced-scaffold na na AOJK01000036.1 = NZ_AOJK01000036.1 Primary Assembly 261314 na contig_37 unplaced-scaffold na na AOJK01000037.1 = NZ_AOJK01000037.1 Primary Assembly 1963 na contig_38 unplaced-scaffold na na AOJK01000038.1 = NZ_AOJK01000038.1 Primary Assembly 51770 na contig_39 unplaced-scaffold na na AOJK01000039.1 = NZ_AOJK01000039.1 Primary Assembly 2188 na contig_40 unplaced-scaffold na na AOJK01000040.1 = NZ_AOJK01000040.1 Primary Assembly 80473 na contig_41 unplaced-scaffold na na AOJK01000041.1 = NZ_AOJK01000041.1 Primary Assembly 179716 na contig_42 unplaced-scaffold na na AOJK01000042.1 = NZ_AOJK01000042.1 Primary Assembly 22409 na contig_43 unplaced-scaffold na na AOJK01000043.1 = NZ_AOJK01000043.1 Primary Assembly 346 na contig_44 unplaced-scaffold na na AOJK01000044.1 = NZ_AOJK01000044.1 Primary Assembly 25014 na contig_45 unplaced-scaffold na na AOJK01000045.1 = NZ_AOJK01000045.1 Primary Assembly 20660 na contig_46 unplaced-scaffold na na AOJK01000046.1 = NZ_AOJK01000046.1 Primary Assembly 699 na contig_47 unplaced-scaffold na na AOJK01000047.1 = NZ_AOJK01000047.1 Primary Assembly 2055 na contig_48 unplaced-scaffold na na AOJK01000048.1 = NZ_AOJK01000048.1 Primary Assembly 26626 na contig_49 unplaced-scaffold na na AOJK01000049.1 = NZ_AOJK01000049.1 Primary Assembly 352 na contig_50 unplaced-scaffold na na AOJK01000050.1 = NZ_AOJK01000050.1 Primary Assembly 100676 na contig_51 unplaced-scaffold na na AOJK01000051.1 = NZ_AOJK01000051.1 Primary Assembly 15211 na contig_52 unplaced-scaffold na na AOJK01000052.1 = NZ_AOJK01000052.1 Primary Assembly 26538 na contig_53 unplaced-scaffold na na AOJK01000053.1 = NZ_AOJK01000053.1 Primary Assembly 25330 na contig_54 unplaced-scaffold na na AOJK01000054.1 = NZ_AOJK01000054.1 Primary Assembly 1038 na contig_55 unplaced-scaffold na na AOJK01000055.1 = NZ_AOJK01000055.1 Primary Assembly 310 na contig_56 unplaced-scaffold na na AOJK01000056.1 = NZ_AOJK01000056.1 Primary Assembly 21384 na contig_57 unplaced-scaffold na na AOJK01000057.1 = NZ_AOJK01000057.1 Primary Assembly 87639 na contig_58 unplaced-scaffold na na AOJK01000058.1 = NZ_AOJK01000058.1 Primary Assembly 18549 na contig_59 unplaced-scaffold na na AOJK01000059.1 = NZ_AOJK01000059.1 Primary Assembly 85044 na contig_60 unplaced-scaffold na na AOJK01000060.1 = NZ_AOJK01000060.1 Primary Assembly 308 na contig_61 unplaced-scaffold na na AOJK01000061.1 = NZ_AOJK01000061.1 Primary Assembly 1893 na contig_62 unplaced-scaffold na na AOJK01000062.1 = NZ_AOJK01000062.1 Primary Assembly 59609 na contig_63 unplaced-scaffold na na AOJK01000063.1 = NZ_AOJK01000063.1 Primary Assembly 198633 na contig_64 unplaced-scaffold na na AOJK01000064.1 = NZ_AOJK01000064.1 Primary Assembly 197865 na contig_65 unplaced-scaffold na na AOJK01000065.1 = NZ_AOJK01000065.1 Primary Assembly 20702 na contig_66 unplaced-scaffold na na AOJK01000066.1 = NZ_AOJK01000066.1 Primary Assembly 1585 na contig_67 unplaced-scaffold na na AOJK01000067.1 = NZ_AOJK01000067.1 Primary Assembly 118131 na contig_68 unplaced-scaffold na na AOJK01000068.1 = NZ_AOJK01000068.1 Primary Assembly 11838 na contig_69 unplaced-scaffold na na AOJK01000069.1 = NZ_AOJK01000069.1 Primary Assembly 54844 na contig_70 unplaced-scaffold na na AOJK01000070.1 = NZ_AOJK01000070.1 Primary Assembly 3443 na contig_71 unplaced-scaffold na na AOJK01000071.1 = NZ_AOJK01000071.1 Primary Assembly 7674 na contig_72 unplaced-scaffold na na AOJK01000072.1 = NZ_AOJK01000072.1 Primary Assembly 147142 na contig_73 unplaced-scaffold na na AOJK01000073.1 = NZ_AOJK01000073.1 Primary Assembly 155407 na contig_74 unplaced-scaffold na na AOJK01000074.1 = NZ_AOJK01000074.1 Primary Assembly 14137 na contig_75 unplaced-scaffold na na AOJK01000075.1 = NZ_AOJK01000075.1 Primary Assembly 6529 na contig_76 unplaced-scaffold na na AOJK01000076.1 = NZ_AOJK01000076.1 Primary Assembly 3890 na contig_77 unplaced-scaffold na na AOJK01000077.1 = NZ_AOJK01000077.1 Primary Assembly 55532 na contig_78 unplaced-scaffold na na AOJK01000078.1 = NZ_AOJK01000078.1 Primary Assembly 37693 na contig_79 unplaced-scaffold na na AOJK01000079.1 = NZ_AOJK01000079.1 Primary Assembly 566 na contig_80 unplaced-scaffold na na AOJK01000080.1 = NZ_AOJK01000080.1 Primary Assembly 18008 na contig_81 unplaced-scaffold na na AOJK01000081.1 = NZ_AOJK01000081.1 Primary Assembly 58524 na contig_82 unplaced-scaffold na na AOJK01000082.1 = NZ_AOJK01000082.1 Primary Assembly 20708 na contig_83 unplaced-scaffold na na AOJK01000083.1 = NZ_AOJK01000083.1 Primary Assembly 36325 na