# Assembly name: ASM33735v1 # Organism name: Halorubrum kocurii JCM 14978 (euryarchaeotes) # Infraspecific name: strain=JCM 14978 # Taxid: 1230456 # BioSample: SAMN02471633 # BioProject: PRJNA174917 # Submitter: University of California, Davis # Date: 2013-02-04 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: AOJH01 # Assembly method: A5 v. Nov-2011 # Genome coverage: 200x # Sequencing technology: Illumina GAIIX; HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000337355.1 # RefSeq assembly accession: GCF_000337355.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000337365.1 GCF_000337365.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_1 unplaced-scaffold na na AOJH01000001.1 = NZ_AOJH01000001.1 Primary Assembly 91988 na contig_2 unplaced-scaffold na na AOJH01000002.1 = NZ_AOJH01000002.1 Primary Assembly 8759 na contig_3 unplaced-scaffold na na AOJH01000003.1 = NZ_AOJH01000003.1 Primary Assembly 2707 na contig_4 unplaced-scaffold na na AOJH01000004.1 = NZ_AOJH01000004.1 Primary Assembly 4935 na contig_5 unplaced-scaffold na na AOJH01000005.1 = NZ_AOJH01000005.1 Primary Assembly 490 na contig_6 unplaced-scaffold na na AOJH01000006.1 = NZ_AOJH01000006.1 Primary Assembly 157212 na contig_7 unplaced-scaffold na na AOJH01000007.1 = NZ_AOJH01000007.1 Primary Assembly 3480 na contig_8 unplaced-scaffold na na AOJH01000008.1 = NZ_AOJH01000008.1 Primary Assembly 1143 na contig_9 unplaced-scaffold na na AOJH01000009.1 = NZ_AOJH01000009.1 Primary Assembly 45606 na contig_10 unplaced-scaffold na na AOJH01000010.1 = NZ_AOJH01000010.1 Primary Assembly 5088 na contig_11 unplaced-scaffold na na AOJH01000011.1 = NZ_AOJH01000011.1 Primary Assembly 38838 na contig_12 unplaced-scaffold na na AOJH01000012.1 = NZ_AOJH01000012.1 Primary Assembly 81403 na contig_13 unplaced-scaffold na na AOJH01000013.1 = NZ_AOJH01000013.1 Primary Assembly 322 na contig_14 unplaced-scaffold na na AOJH01000014.1 = NZ_AOJH01000014.1 Primary Assembly 341 na contig_15 unplaced-scaffold na na AOJH01000015.1 = NZ_AOJH01000015.1 Primary Assembly 7072 na contig_16 unplaced-scaffold na na AOJH01000016.1 = NZ_AOJH01000016.1 Primary Assembly 20841 na contig_17 unplaced-scaffold na na AOJH01000017.1 = NZ_AOJH01000017.1 Primary Assembly 13291 na contig_18 unplaced-scaffold na na AOJH01000018.1 = NZ_AOJH01000018.1 Primary Assembly 39202 na contig_19 unplaced-scaffold na na AOJH01000019.1 = NZ_AOJH01000019.1 Primary Assembly 15974 na contig_20 unplaced-scaffold na na AOJH01000020.1 = NZ_AOJH01000020.1 Primary Assembly 7587 na contig_21 unplaced-scaffold na na AOJH01000021.1 = NZ_AOJH01000021.1 Primary Assembly 30910 na contig_22 unplaced-scaffold na na AOJH01000022.1 = NZ_AOJH01000022.1 Primary Assembly 1081 na contig_23 unplaced-scaffold na na AOJH01000023.1 = NZ_AOJH01000023.1 Primary Assembly 59004 na contig_24 unplaced-scaffold na na AOJH01000024.1 = NZ_AOJH01000024.1 Primary Assembly 9363 na contig_25 unplaced-scaffold na na AOJH01000025.1 = NZ_AOJH01000025.1 Primary Assembly 24688 na contig_26 unplaced-scaffold na na AOJH01000026.1 = NZ_AOJH01000026.1 Primary Assembly 696 na contig_27 unplaced-scaffold na na AOJH01000027.1 = NZ_AOJH01000027.1 Primary Assembly 167578 na contig_28 unplaced-scaffold na na AOJH01000028.1 = NZ_AOJH01000028.1 Primary Assembly 468 na contig_29 unplaced-scaffold na na AOJH01000029.1 = NZ_AOJH01000029.1 Primary Assembly 6392 na contig_30 unplaced-scaffold na na AOJH01000030.1 = NZ_AOJH01000030.1 Primary Assembly 42117 na contig_31 unplaced-scaffold na na AOJH01000031.1 = NZ_AOJH01000031.1 Primary Assembly 17613 na contig_32 unplaced-scaffold na na AOJH01000032.1 = NZ_AOJH01000032.1 Primary Assembly 25486 na contig_33 unplaced-scaffold na na AOJH01000033.1 = NZ_AOJH01000033.1 Primary Assembly 5698 na contig_34 unplaced-scaffold na na AOJH01000034.1 = NZ_AOJH01000034.1 Primary Assembly 9167 na contig_35 unplaced-scaffold na na AOJH01000035.1 = NZ_AOJH01000035.1 Primary Assembly 53090 na contig_36 unplaced-scaffold na na AOJH01000036.1 = NZ_AOJH01000036.1 Primary Assembly 7493 na contig_37 unplaced-scaffold na na AOJH01000037.1 = NZ_AOJH01000037.1 Primary Assembly 89046 na contig_38 unplaced-scaffold na na AOJH01000038.1 = NZ_AOJH01000038.1 Primary Assembly 25319 na contig_39 unplaced-scaffold na na AOJH01000039.1 = NZ_AOJH01000039.1 Primary Assembly 692 na contig_40 unplaced-scaffold na na AOJH01000040.1 = NZ_AOJH01000040.1 Primary Assembly 67328 na contig_41 unplaced-scaffold na na AOJH01000041.1 = NZ_AOJH01000041.1 Primary Assembly 4051 na contig_42 unplaced-scaffold na na AOJH01000042.1 = NZ_AOJH01000042.1 Primary Assembly 4445 na contig_43 unplaced-scaffold na na AOJH01000043.1 = NZ_AOJH01000043.1 Primary Assembly 211894 na contig_44 unplaced-scaffold na na AOJH01000044.1 = NZ_AOJH01000044.1 Primary Assembly 5266 na contig_45 unplaced-scaffold na na AOJH01000045.1 = NZ_AOJH01000045.1 Primary Assembly 42423 na contig_46 unplaced-scaffold na na AOJH01000046.1 = NZ_AOJH01000046.1 Primary Assembly 9791 na contig_47 unplaced-scaffold na na AOJH01000047.1 = NZ_AOJH01000047.1 Primary Assembly 59719 na contig_48 unplaced-scaffold na na AOJH01000048.1 = NZ_AOJH01000048.1 Primary Assembly 44026 na contig_49 unplaced-scaffold na na AOJH01000049.1 = NZ_AOJH01000049.1 Primary Assembly 46515 na contig_50 unplaced-scaffold na na AOJH01000050.1 = NZ_AOJH01000050.1 Primary Assembly 1004 na contig_51 unplaced-scaffold na na AOJH01000051.1 = NZ_AOJH01000051.1 Primary Assembly 42978 na contig_52 unplaced-scaffold na na AOJH01000052.1 = NZ_AOJH01000052.1 Primary Assembly 25949 na contig_53 unplaced-scaffold na na AOJH01000053.1 = NZ_AOJH01000053.1 Primary Assembly 23029 na contig_54 unplaced-scaffold na na AOJH01000054.1 = NZ_AOJH01000054.1 Primary Assembly 33319 na contig_55 unplaced-scaffold na na AOJH01000055.1 = NZ_AOJH01000055.1 Primary Assembly 34119 na contig_56 unplaced-scaffold na na AOJH01000056.1 = NZ_AOJH01000056.1 Primary Assembly 12227 na contig_57 unplaced-scaffold na na AOJH01000057.1 = NZ_AOJH01000057.1 Primary Assembly 75358 na contig_58 unplaced-scaffold na na AOJH01000058.1 = NZ_AOJH01000058.1 Primary Assembly 7003 na contig_59 unplaced-scaffold na na AOJH01000059.1 = NZ_AOJH01000059.1 Primary Assembly 3622 na contig_60 unplaced-scaffold na na AOJH01000060.1 = NZ_AOJH01000060.1 Primary Assembly 63928 na contig_61 unplaced-scaffold na na AOJH01000061.1 = NZ_AOJH01000061.1 Primary Assembly 86773 na contig_62 unplaced-scaffold na na AOJH01000062.1 = NZ_AOJH01000062.1 Primary Assembly 73549 na contig_63 unplaced-scaffold na na AOJH01000063.1 = NZ_AOJH01000063.1 Primary Assembly 20883 na contig_64 unplaced-scaffold na na AOJH01000064.1 = NZ_AOJH01000064.1 Primary Assembly 19419 na contig_65 unplaced-scaffold na na AOJH01000065.1 = NZ_AOJH01000065.1 Primary Assembly 72076 na contig_66 unplaced-scaffold na na AOJH01000066.1 = NZ_AOJH01000066.1 Primary Assembly 3477 na contig_67 unplaced-scaffold na na AOJH01000067.1 = NZ_AOJH01000067.1 Primary Assembly 1243 na contig_68 unplaced-scaffold na na AOJH01000068.1 = NZ_AOJH01000068.1 Primary Assembly 145978 na contig_69 unplaced-scaffold na na AOJH01000069.1 = NZ_AOJH01000069.1 Primary Assembly 4811 na contig_70 unplaced-scaffold na na AOJH01000070.1 = NZ_AOJH01000070.1 Primary Assembly 6479 na contig_71 unplaced-scaffold na na AOJH01000071.1 = NZ_AOJH01000071.1 Primary Assembly 47800 na contig_72 unplaced-scaffold na na AOJH01000072.1 = NZ_AOJH01000072.1 Primary Assembly 42965 na contig_73 unplaced-scaffold na na AOJH01000073.1 = NZ_AOJH01000073.1 Primary Assembly 22745 na contig_74 unplaced-scaffold na na AOJH01000074.1 = NZ_AOJH01000074.1 Primary Assembly 15764 na contig_75 unplaced-scaffold na na AOJH01000075.1 = NZ_AOJH01000075.1 Primary Assembly 7894 na contig_76 unplaced-scaffold na na AOJH01000076.1 = NZ_AOJH01000076.1 Primary Assembly 70450 na contig_77 unplaced-scaffold na na AOJH01000077.1 = NZ_AOJH01000077.1 Primary Assembly 18372 na contig_78 unplaced-scaffold na na AOJH01000078.1 = NZ_AOJH01000078.1 Primary Assembly 6902 na contig_79 unplaced-scaffold na na AOJH01000079.1 = NZ_AOJH01000079.1 Primary Assembly 68706 na contig_80 unplaced-scaffold na na AOJH01000080.1 = NZ_AOJH01000080.1 Primary Assembly 34781 na contig_81 unplaced-scaffold na na AOJH01000081.1 = NZ_AOJH01000081.1 Primary Assembly 43861 na contig_82 unplaced-scaffold na na AOJH01000082.1 = NZ_AOJH01000082.1 Primary Assembly 59804 na contig_83 unplaced-scaffold na na AOJH01000083.1 = NZ_AOJH01000083.1 Primary Assembly 73811 na contig_84 unplaced-scaffold na na AOJH01000084.1 = NZ_AOJH01000084.1 Primary Assembly 46360 na contig_85 unplaced-scaffold na na AOJH01000085.1 = NZ_AOJH01000085.1 Primary Assembly 6501 na contig_86 unplaced-scaffold na na AOJH01000086.1 = NZ_AOJH01000086.1 Primary Assembly 68954 na contig_87 unplaced-scaffold na na AOJH01000087.1 = NZ_AOJH01000087.1 Primary Assembly 17801 na contig_88 unplaced-scaffold na na AOJH01000088.1 = NZ_AOJH01000088.1 Primary Assembly 17813 na contig_89 unplaced-scaffold na na AOJH01000089.1 = NZ_AOJH01000089.1 Primary Assembly 73052 na contig_90 unplaced-scaffold na na AOJH01000090.1 = NZ_AOJH01000090.1 Primary Assembly 329 na contig_91 unplaced-scaffold na na AOJH01000091.1 = NZ_AOJH01000091.1 Primary Assembly 5800 na contig_92 unplaced-scaffold na na AOJH01000092.1 = NZ_AOJH01000092.1 Primary Assembly 5785 na contig_93 unplaced-scaffold na na AOJH01000093.1 = NZ_AOJH01000093.1 Primary Assembly 48919 na contig_94 unplaced-scaffold na na AOJH01000094.1 = NZ_AOJH01000094.1 Primary Assembly 25193 na contig_95 unplaced-scaffold na na AOJH01000095.1 = NZ_AOJH01000095.1 Primary Assembly 5400 na contig_96 unplaced-scaffold na na AOJH01000096.1 = NZ_AOJH01000096.1 Primary Assembly 26657 na contig_97 unplaced-scaffold na na AOJH01000097.1 = NZ_AOJH01000097.1 Primary Assembly 28960 na contig_98 unplaced-scaffold na na AOJH01000098.1 = NZ_AOJH01000098.1 Primary Assembly 248 na contig_99 unplaced-scaffold na na AOJH01000099.1 = NZ_AOJH01000099.1 Primary Assembly 31270 na contig_100 unplaced-scaffold na na AOJH01000100.1 = NZ_AOJH01000100.1 Primary Assembly 46748 na contig_101 unplaced-scaffold na na AOJH01000101.1 = NZ_AOJH01000101.1 Primary Assembly 57627 na contig_102 unplaced-scaffold na na AOJH01000102.1 = NZ_AOJH01000102.1 Primary Assembly 65834 na contig_103 unplaced-scaffold na na AOJH01000103.1 = NZ_AOJH01000103.1 Primary Assembly 25348 na contig_104 unplaced-scaffold na na AOJH01000104.1 = NZ_AOJH01000104.1 Primary Assembly 29357 na contig_105 unplaced-scaffold na na AOJH01000105.1 = NZ_AOJH01000105.1 Primary Assembly 97065 na