# Assembly name: ASM37354v1 # Organism name: Alkalispirochaeta alkalica DSM 8900 (spirochetes) # Infraspecific name: strain=DSM 8900 # Taxid: 942938 # BioSample: SAMN02440429 # BioProject: PRJNA169743 # Submitter: DOE Joint Genome Institute # Date: 2013-04-23 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AREC01 # Assembly method: Velvet v. 1.1.04; ALLPATHS v. r41043 # Genome coverage: Unknown # Sequencing technology: Illumina; 454-GS-FLX-Titanium # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000373545.1 # RefSeq assembly accession: GCF_000373545.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000373555.1 GCF_000373555.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name B071DRAFT_scaffold_0.1 unplaced-scaffold na na KB891691.1 = NZ_KB891691.1 Primary Assembly 367735 na B071DRAFT_scaffold_1.2 unplaced-scaffold na na KB891692.1 = NZ_KB891692.1 Primary Assembly 235034 na B071DRAFT_scaffold_10.11 unplaced-scaffold na na KB891693.1 = NZ_KB891693.1 Primary Assembly 135061 na B071DRAFT_scaffold_11.12 unplaced-scaffold na na KB891694.1 = NZ_KB891694.1 Primary Assembly 115345 na B071DRAFT_scaffold_12.13 unplaced-scaffold na na KB891695.1 = NZ_KB891695.1 Primary Assembly 101067 na B071DRAFT_scaffold_13.14 unplaced-scaffold na na KB891696.1 = NZ_KB891696.1 Primary Assembly 98794 na B071DRAFT_scaffold_14.15 unplaced-scaffold na na KB891697.1 = NZ_KB891697.1 Primary Assembly 83022 na B071DRAFT_scaffold_15.16 unplaced-scaffold na na KB891698.1 = NZ_KB891698.1 Primary Assembly 76234 na B071DRAFT_scaffold_16.17 unplaced-scaffold na na KB891699.1 = NZ_KB891699.1 Primary Assembly 72027 na B071DRAFT_scaffold_17.18 unplaced-scaffold na na KB891700.1 = NZ_KB891700.1 Primary Assembly 72610 na B071DRAFT_scaffold_18.19 unplaced-scaffold na na KB891701.1 = NZ_KB891701.1 Primary Assembly 70709 na B071DRAFT_scaffold_19.20 unplaced-scaffold na na KB891702.1 = NZ_KB891702.1 Primary Assembly 65933 na B071DRAFT_scaffold_2.3 unplaced-scaffold na na KB891703.1 = NZ_KB891703.1 Primary Assembly 191395 na B071DRAFT_scaffold_20.21 unplaced-scaffold na na KB891704.1 = NZ_KB891704.1 Primary Assembly 63417 na B071DRAFT_scaffold_21.22 unplaced-scaffold na na KB891705.1 = NZ_KB891705.1 Primary Assembly 49383 na B071DRAFT_scaffold_22.23 unplaced-scaffold na na KB891706.1 = NZ_KB891706.1 Primary Assembly 46138 na B071DRAFT_scaffold_23.24 unplaced-scaffold na na KB891707.1 = NZ_KB891707.1 Primary Assembly 31039 na B071DRAFT_scaffold_24.25 unplaced-scaffold na na KB891708.1 = NZ_KB891708.1 Primary Assembly 36213 na B071DRAFT_scaffold_25.26 unplaced-scaffold na na KB891709.1 = NZ_KB891709.1 Primary Assembly 28472 na B071DRAFT_scaffold_26.27 unplaced-scaffold na na KB891710.1 = NZ_KB891710.1 Primary Assembly 25105 na B071DRAFT_scaffold_27.28 unplaced-scaffold na na KB891711.1 = NZ_KB891711.1 Primary Assembly 20605 na B071DRAFT_scaffold_28.29 unplaced-scaffold na na KB891712.1 = NZ_KB891712.1 Primary Assembly 16325 na B071DRAFT_scaffold_29.30 unplaced-scaffold na na KB891713.1 = NZ_KB891713.1 Primary Assembly 16185 na B071DRAFT_scaffold_3.4 unplaced-scaffold na na KB891714.1 = NZ_KB891714.1 Primary Assembly 186494 na B071DRAFT_scaffold_30.31 unplaced-scaffold na na KB891715.1 = NZ_KB891715.1 Primary Assembly 15534 na B071DRAFT_scaffold_31.32 unplaced-scaffold na na KB891716.1 = NZ_KB891716.1 Primary Assembly 15856 na B071DRAFT_scaffold_32.33 unplaced-scaffold na na KB891717.1 = NZ_KB891717.1 Primary Assembly 15046 na B071DRAFT_scaffold_33.34 unplaced-scaffold na na KB891718.1 = NZ_KB891718.1 Primary Assembly 12961 na B071DRAFT_scaffold_34.35 unplaced-scaffold na na KB891719.1 = NZ_KB891719.1 Primary Assembly 6904 na B071DRAFT_scaffold_35.36 unplaced-scaffold na na KB891720.1 = NZ_KB891720.1 Primary Assembly 7147 na B071DRAFT_scaffold_36.37 unplaced-scaffold na na KB891721.1 = NZ_KB891721.1 Primary Assembly 7067 na B071DRAFT_scaffold_37.38 unplaced-scaffold na na KB891722.1 = NZ_KB891722.1 Primary Assembly 6762 na B071DRAFT_scaffold_38.39 unplaced-scaffold na na KB891723.1 = NZ_KB891723.1 Primary Assembly 6623 na B071DRAFT_scaffold_39.40 unplaced-scaffold na na KB891724.1 = NZ_KB891724.1 Primary Assembly 6548 na B071DRAFT_scaffold_4.5 unplaced-scaffold na na KB891725.1 = NZ_KB891725.1 Primary Assembly 184629 na B071DRAFT_scaffold_40.41 unplaced-scaffold na na KB891726.1 = NZ_KB891726.1 Primary Assembly 6538 na B071DRAFT_scaffold_41.42 unplaced-scaffold na na KB891727.1 = NZ_KB891727.1 Primary Assembly 6413 na B071DRAFT_scaffold_42.43 unplaced-scaffold na na KB891728.1 = NZ_KB891728.1 Primary Assembly 5999 na B071DRAFT_scaffold_43.44 unplaced-scaffold na na KB891729.1 = NZ_KB891729.1 Primary Assembly 5236 na B071DRAFT_scaffold_44.45 unplaced-scaffold na na KB891730.1 = NZ_KB891730.1 Primary Assembly 4902 na B071DRAFT_scaffold_45.46 unplaced-scaffold na na KB891731.1 = NZ_KB891731.1 Primary Assembly 4261 na B071DRAFT_scaffold_46.47 unplaced-scaffold na na KB891732.1 = NZ_KB891732.1 Primary Assembly 4004 na B071DRAFT_scaffold_47.48 unplaced-scaffold na na KB891733.1 = NZ_KB891733.1 Primary Assembly 3649 na B071DRAFT_scaffold_48.49 unplaced-scaffold na na KB891734.1 = NZ_KB891734.1 Primary Assembly 3447 na B071DRAFT_scaffold_49.50 unplaced-scaffold na na KB891735.1 = NZ_KB891735.1 Primary Assembly 3267 na B071DRAFT_scaffold_5.6 unplaced-scaffold na na KB891736.1 = NZ_KB891736.1 Primary Assembly 184600 na B071DRAFT_scaffold_50.51 unplaced-scaffold na na KB891737.1 = NZ_KB891737.1 Primary Assembly 3010 na B071DRAFT_scaffold_51.52 unplaced-scaffold na na KB891738.1 = NZ_KB891738.1 Primary Assembly 2992 na B071DRAFT_scaffold_52.53 unplaced-scaffold na na KB891739.1 = NZ_KB891739.1 Primary Assembly 2713 na B071DRAFT_scaffold_53.54 unplaced-scaffold na na KB891740.1 = NZ_KB891740.1 Primary Assembly 1826 na B071DRAFT_scaffold_54.55 unplaced-scaffold na na KB891741.1 = NZ_KB891741.1 Primary Assembly 1760 na B071DRAFT_scaffold_55.56 unplaced-scaffold na na KB891742.1 = NZ_KB891742.1 Primary Assembly 1775 na B071DRAFT_scaffold_56.57 unplaced-scaffold na na KB891743.1 = NZ_KB891743.1 Primary Assembly 1534 na B071DRAFT_scaffold_57.58 unplaced-scaffold na na KB891744.1 = NZ_KB891744.1 Primary Assembly 1534 na B071DRAFT_scaffold_58.59 unplaced-scaffold na na KB891745.1 = NZ_KB891745.1 Primary Assembly 1517 na B071DRAFT_scaffold_59.60 unplaced-scaffold na na KB891746.1 = NZ_KB891746.1 Primary Assembly 1450 na B071DRAFT_scaffold_6.7 unplaced-scaffold na na KB891747.1 = NZ_KB891747.1 Primary Assembly 175040 na B071DRAFT_scaffold_60.61 unplaced-scaffold na na KB891748.1 = NZ_KB891748.1 Primary Assembly 1447 na B071DRAFT_scaffold_61.62 unplaced-scaffold na na KB891749.1 = NZ_KB891749.1 Primary Assembly 1410 na B071DRAFT_scaffold_62.63 unplaced-scaffold na na KB891750.1 = NZ_KB891750.1 Primary Assembly 1259 na B071DRAFT_scaffold_63.64 unplaced-scaffold na na KB891751.1 = NZ_KB891751.1 Primary Assembly 1310 na B071DRAFT_scaffold_64.65 unplaced-scaffold na na KB891752.1 = NZ_KB891752.1 Primary Assembly 1306 na B071DRAFT_scaffold_65.66 unplaced-scaffold na na KB891753.1 = NZ_KB891753.1 Primary Assembly 1259 na B071DRAFT_scaffold_66.67 unplaced-scaffold na na KB891754.1 = NZ_KB891754.1 Primary Assembly 1277 na B071DRAFT_scaffold_67.68 unplaced-scaffold na na KB891755.1 = NZ_KB891755.1 Primary Assembly 1232 na B071DRAFT_scaffold_68.69 unplaced-scaffold na na KB891756.1 = NZ_KB891756.1 Primary Assembly 1131 na B071DRAFT_scaffold_69.70 unplaced-scaffold na na KB891757.1 = NZ_KB891757.1 Primary Assembly 1033 na B071DRAFT_scaffold_7.8 unplaced-scaffold na na KB891758.1 = NZ_KB891758.1 Primary Assembly 153220 na B071DRAFT_scaffold_70.71 unplaced-scaffold na na KB891759.1 = NZ_KB891759.1 Primary Assembly 1008 na B071DRAFT_scaffold_8.9 unplaced-scaffold na na KB891760.1 = NZ_KB891760.1 Primary Assembly 145061 na B071DRAFT_scaffold_9.10 unplaced-scaffold na na KB891761.1 = NZ_KB891761.1 Primary Assembly 129475 na